Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|040380
Gene name
Locationscaffold_2:495895..497236
Strand+
Gene length (bp)1341
Transcript length (bp)1221
Coding sequence length (bp)1221
Protein length (aa) 407

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18376 MDD_C Mevalonate 5-diphosphate decarboxylase C-terminal domain 1.0E-70 196 388
PF00288 GHMP_kinases_N GHMP kinases N terminal domain 1.2E-05 107 165

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6BY07|MVD1_DEBHA Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MVD1 PE=3 SV=2 1 406 3.0E-130
sp|O13963|MVD1_SCHPO Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1 3 403 3.0E-124
sp|P32377|MVD1_YEAST Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2 1 403 2.0E-120
sp|Q99JF5|MVD1_MOUSE Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2 7 403 1.0E-117
sp|Q54YQ9|MVD1_DICDI Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum GN=mvd PE=3 SV=1 1 405 4.0E-115
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6BY07|MVD1_DEBHA Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MVD1 PE=3 SV=2 1 406 3.0E-130
sp|O13963|MVD1_SCHPO Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1 3 403 3.0E-124
sp|P32377|MVD1_YEAST Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2 1 403 2.0E-120
sp|Q99JF5|MVD1_MOUSE Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2 7 403 1.0E-117
sp|Q54YQ9|MVD1_DICDI Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum GN=mvd PE=3 SV=1 1 405 4.0E-115
sp|Q0P570|MVD1_BOVIN Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1 7 406 1.0E-114
sp|Q5U403|MVD1_DANRE Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1 6 406 1.0E-113
sp|Q62967|MVD1_RAT Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=1 SV=1 7 403 2.0E-113
sp|P53602|MVD1_HUMAN Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1 7 406 1.0E-110
sp|Q751D8|MVD1_ASHGO Diphosphomevalonate decarboxylase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MVD1 PE=3 SV=2 1 403 6.0E-110
sp|Q97UL5|DMD_SULSO Diphosphomevalonate decarboxylase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=SSO2989 PE=1 SV=1 6 329 2.0E-60
sp|D4GXZ3|PMD_HALVD Phosphomevalonate decarboxylase OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=mvaD PE=1 SV=1 5 353 4.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0035639 purine ribonucleoside triphosphate binding No
GO:1901265 nucleoside phosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0036094 small molecule binding No
GO:0032553 ribonucleotide binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0030554 adenyl nucleotide binding No
GO:0043168 anion binding No
GO:0017076 purine nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0003674 molecular_function No
GO:0000166 nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|040380
MTVYQATASAPVNIACIKYWGKRDTKLILPTNSSLSVTLDQDHLRSTTTSRADPSFTNDRLWLNGKEEEIKEGGR
LWTCIREMKRLRKEEVEDKSSSEPKLSTYNVHICSHNNFPTAAGLASSASGFAALVSSLSHLYSLPVSSSTLSLI
ARQGSGSACRSLFGGFVAWQMGSNPSGSDSLALQIAPQSHWPDIHALICIVSDDKKGTSSTSGMQRTVETSSLLH
HRINTVVPHRMETISKAIQEKDFDTFAKVTMADSNQFHAVALDTEPPIFYLNDVSRAIIALVVEYNRLGVEEGKG
YRAAYTYDAGPNAVIYAKKENVKEILELVVEYFPQREGAFKDAFGLFGGGGKVGGKLPMGFNENVAKRFEVGAVK
GLIHTRVGDGPRKLGDGEGLLNDEGLPKSLA*
Coding >AgabiH97|040380
ATGACCGTTTACCAAGCTACTGCATCTGCACCTGTAAACATTGCCTGCATCAAATATTGGGGCAAAAGGGATACA
AAATTGATCTTGCCCACAAACTCTTCGCTTTCTGTTACCCTTGACCAAGATCATTTACGATCTACGACTACTTCA
CGAGCGGACCCATCGTTCACTAATGATCGCTTGTGGCTTAATGGTAAGGAGGAGGAGATTAAGGAGGGTGGGAGG
TTGTGGACTTGTATAAGGGAGATGAAGAGGTTGAGGAAGGAGGAAGTTGAAGATAAAAGTTCTAGTGAACCCAAG
TTATCAACATACAATGTTCACATATGTTCACACAACAACTTCCCCACTGCCGCTGGACTCGCATCTTCCGCATCC
GGATTCGCAGCTCTAGTCTCCTCACTCTCGCATCTCTATTCCCTTCCGGTTTCCTCATCCACTCTTTCTTTAATC
GCTCGTCAAGGTTCCGGTTCCGCCTGTCGTTCCCTTTTCGGTGGTTTTGTAGCTTGGCAAATGGGTTCAAACCCT
TCTGGTTCCGATTCCCTCGCACTACAAATCGCACCTCAATCTCATTGGCCTGATATTCATGCTCTTATATGTATA
GTCTCTGATGACAAGAAAGGGACATCTAGTACGAGTGGTATGCAACGTACAGTCGAAACTTCATCTTTACTACAC
CATCGTATCAACACCGTCGTTCCTCATCGTATGGAAACGATTTCCAAAGCCATTCAAGAAAAAGATTTTGATACG
TTTGCGAAAGTGACGATGGCGGATTCGAATCAATTTCATGCTGTGGCTTTGGATACGGAACCCCCGATTTTTTAT
TTGAATGATGTGAGTAGGGCTATCATTGCTTTGGTGGTGGAGTATAATCGATTGGGGGTTGAGGAGGGGAAAGGG
TATAGGGCGGCGTATACGTATGATGCTGGACCGAATGCGGTTATATATGCGAAGAAGGAAAATGTGAAAGAGATT
TTGGAGTTGGTGGTTGAGTATTTTCCGCAAAGGGAGGGTGCGTTTAAAGATGCGTTTGGATTGTTTGGAGGGGGA
GGAAAGGTGGGTGGGAAATTGCCGATGGGATTTAATGAAAATGTGGCGAAGAGGTTTGAGGTGGGTGCGGTTAAA
GGATTGATTCATACTCGTGTTGGGGATGGACCGAGGAAATTGGGAGATGGGGAAGGGTTGTTGAATGATGAAGGT
TTGCCTAAAAGTTTGGCGTAG
Transcript >AgabiH97|040380
ATGACCGTTTACCAAGCTACTGCATCTGCACCTGTAAACATTGCCTGCATCAAATATTGGGGCAAAAGGGATACA
AAATTGATCTTGCCCACAAACTCTTCGCTTTCTGTTACCCTTGACCAAGATCATTTACGATCTACGACTACTTCA
CGAGCGGACCCATCGTTCACTAATGATCGCTTGTGGCTTAATGGTAAGGAGGAGGAGATTAAGGAGGGTGGGAGG
TTGTGGACTTGTATAAGGGAGATGAAGAGGTTGAGGAAGGAGGAAGTTGAAGATAAAAGTTCTAGTGAACCCAAG
TTATCAACATACAATGTTCACATATGTTCACACAACAACTTCCCCACTGCCGCTGGACTCGCATCTTCCGCATCC
GGATTCGCAGCTCTAGTCTCCTCACTCTCGCATCTCTATTCCCTTCCGGTTTCCTCATCCACTCTTTCTTTAATC
GCTCGTCAAGGTTCCGGTTCCGCCTGTCGTTCCCTTTTCGGTGGTTTTGTAGCTTGGCAAATGGGTTCAAACCCT
TCTGGTTCCGATTCCCTCGCACTACAAATCGCACCTCAATCTCATTGGCCTGATATTCATGCTCTTATATGTATA
GTCTCTGATGACAAGAAAGGGACATCTAGTACGAGTGGTATGCAACGTACAGTCGAAACTTCATCTTTACTACAC
CATCGTATCAACACCGTCGTTCCTCATCGTATGGAAACGATTTCCAAAGCCATTCAAGAAAAAGATTTTGATACG
TTTGCGAAAGTGACGATGGCGGATTCGAATCAATTTCATGCTGTGGCTTTGGATACGGAACCCCCGATTTTTTAT
TTGAATGATGTGAGTAGGGCTATCATTGCTTTGGTGGTGGAGTATAATCGATTGGGGGTTGAGGAGGGGAAAGGG
TATAGGGCGGCGTATACGTATGATGCTGGACCGAATGCGGTTATATATGCGAAGAAGGAAAATGTGAAAGAGATT
TTGGAGTTGGTGGTTGAGTATTTTCCGCAAAGGGAGGGTGCGTTTAAAGATGCGTTTGGATTGTTTGGAGGGGGA
GGAAAGGTGGGTGGGAAATTGCCGATGGGATTTAATGAAAATGTGGCGAAGAGGTTTGAGGTGGGTGCGGTTAAA
GGATTGATTCATACTCGTGTTGGGGATGGACCGAGGAAATTGGGAGATGGGGAAGGGTTGTTGAATGATGAAGGT
TTGCCTAAAAGTTTGGCGTAG
Gene >AgabiH97|040380
ATGACCGTTTACCAAGCTACTGCATCTGCACCTGTAAACATTGCCTGCATCAAGTAAGTTGGACTGTTTCCTGAC
TCAGTCGATAGAACTGATTTACTGACTATCGGCATATCGCATATCAGATATTGGGGCAAAAGGGATACAAAATTG
ATCTTGCCCACAAACTCTTCGCTTTCTGTTACCCTTGACCAAGATCATTTACGATCTACGACTACTTCACGAGCG
GACCCATCGTTCACTAATGATCGCTTGTGGCTTAATGGTAAGGAGGAGGAGATTAAGGAGGGTGGGAGGTTGTGG
ACTTGTATAAGGGAGATGAAGAGGTTGAGGAAGGAGGAAGTTGAAGATAAAAGTTCTAGTGAACCCAAGGTTAAT
CCACTCTCCATTTTTTAAATTCATGCTGACACGAATACAAAAAAGTTATCAACATACAATGTTCACATATGTTCA
CACAACAACTTCCCCACTGCCGCTGGACTCGCATCTTCCGCATCCGGATTCGCAGCTCTAGTCTCCTCACTCTCG
CATCTCTATTCCCTTCCGGTTTCCTCATCCACTCTTTCTTTAATCGCTCGTCAAGGTTCCGGTTCCGCCTGTCGT
TCCCTTTTCGGTGGTTTTGTAGCTTGGCAAATGGGTTCAAACCCTTCTGGTTCCGATTCCCTCGCACTACAAATC
GCACCTCAATCTCATTGGCCTGATATTCATGCTCTTATATGTATAGTCTCTGATGACAAGAAAGGGACATCTAGT
ACGAGTGGTATGCAACGTACAGTCGAAACTTCATCTTTACTACACCATCGTATCAACACCGTCGTTCCTCATCGT
ATGGAAACGATTTCCAAAGCCATTCAAGAAAAAGATTTTGATACGTTTGCGAAAGTGACGATGGCGGATTCGAAT
CAATTTCATGCTGTGGCTTTGGATACGGAACCCCCGATTTTTTATTTGAATGATGTGAGTAGGGCTATCATTGCT
TTGGTGGTGGAGTATAATCGATTGGGGGTTGAGGAGGGGAAAGGGTATAGGGCGGCGTATACGTATGATGCTGGA
CCGAATGCGGTTATATATGCGAAGAAGGAAAATGTGAAAGAGATTTTGGAGTTGGTGGTTGAGTATTTTCCGCAA
AGGGAGGGTGCGTTTAAAGATGCGTTTGGATTGTTTGGAGGGGGAGGAAAGGTGGGTGGGAAATTGCCGATGGGA
TTTAATGAAAATGTGGCGAAGAGGTTTGAGGTGGGTGCGGTTAAAGGATTGATTCATACTCGTGTTGGGGATGGA
CCGAGGAAATTGGGAGATGGGGAAGGGTTGTTGAATGATGAAGGTTTGCCTAAAAGTTTGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail