Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|040350
Gene name
Location	scaffold_2:485071..487964
Strand	-
Gene length (bp)	2893
Transcript length (bp)	2316
Coding sequence length (bp)	2316
Protein length (aa)	772

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06588	Muskelin_N	Muskelin N-terminus	5.0E-58	10	204
PF13418	Kelch_4	Galactose oxidase, central domain	1.6E-07	262	312
PF13418	Kelch_4	Galactose oxidase, central domain	1.2E-08	481	524
PF13415	Kelch_3	Galactose oxidase, central domain	6.5E-07	275	325
PF13854	Kelch_5	Kelch motif	6.5E-07	259	298
PF13854	Kelch_5	Kelch motif	6.8E-05	480	518
PF01344	Kelch_1	Kelch motif	1.3E-06	272	305

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q99PV3\|MKLN1_RAT	Muskelin OS=Rattus norvegicus GN=Mkln1 PE=1 SV=1	5	728	4.0E-140
sp\|O89050\|MKLN1_MOUSE	Muskelin OS=Mus musculus GN=Mkln1 PE=1 SV=1	5	728	5.0E-140
sp\|Q5RB35\|MKLN1_PONAB	Muskelin OS=Pongo abelii GN=MKLN1 PE=2 SV=1	5	728	1.0E-139
sp\|Q9UL63\|MKLN1_HUMAN	Muskelin OS=Homo sapiens GN=MKLN1 PE=1 SV=2	5	728	1.0E-139
sp\|O13730\|MDE6_SCHPO	Mei4-dependent protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mde6 PE=4 SV=2	10	707	5.0E-70

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q99PV3\|MKLN1_RAT	Muskelin OS=Rattus norvegicus GN=Mkln1 PE=1 SV=1	5	728	4.0E-140
sp\|O89050\|MKLN1_MOUSE	Muskelin OS=Mus musculus GN=Mkln1 PE=1 SV=1	5	728	5.0E-140
sp\|Q5RB35\|MKLN1_PONAB	Muskelin OS=Pongo abelii GN=MKLN1 PE=2 SV=1	5	728	1.0E-139
sp\|Q9UL63\|MKLN1_HUMAN	Muskelin OS=Homo sapiens GN=MKLN1 PE=1 SV=2	5	728	1.0E-139
sp\|O13730\|MDE6_SCHPO	Mei4-dependent protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mde6 PE=4 SV=2	10	707	5.0E-70
sp\|O14248\|TEA3_SCHPO	Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1	410	515	7.0E-07
sp\|O04318\|JAL27_ARATH	Nitrile-specifier protein 3 OS=Arabidopsis thaliana GN=NSP3 PE=2 SV=1	431	624	7.0E-07
sp\|P50090\|KEL2_YEAST	Kelch repeat-containing protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL2 PE=1 SV=1	433	598	8.0E-07
sp\|Q8IID4\|DYHC2_PLAF7	Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0240 PE=3 SV=1	429	563	3.0E-06
sp\|O49326\|JAL21_ARATH	Nitrile-specifier protein 2 OS=Arabidopsis thaliana GN=NSP2 PE=2 SV=1	431	636	3.0E-06
sp\|Q58CV6\|KLDC3_BOVIN	Kelch domain-containing protein 3 OS=Bos taurus GN=KLHDC3 PE=2 SV=2	417	639	3.0E-06
sp\|P38853\|KEL1_YEAST	Kelch repeat-containing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL1 PE=1 SV=1	405	598	7.0E-06

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GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|040350 MISPPPSVPLSYTVVQSTPHSGKYGPEHILLDKPSDQASRWSGAYQGNTAKQWILLKLDQMSVLKTIAFGKFSKP HPCNMKDFKVYVGITEENLVQVLHGGLKNDTTAEAFPIRHVNNAHVCFPTRYVKIVPLSAHGQNFHTSIWHVALN GISDKKYVDHIYRIHEEHRESTVLRHVLKHLRQRRLLTPYQDILSRAFTNVEHPLITQLHATLVLGGAFKDAEKH LQTLSSSGLFSSYLQSSHPYAVWDRISQAGDDEIPSPRSGHAMCIDAVNEVIYLHGGYNGENCLDDFWAYNIKDE RWHKLMDSTHSKNGPSTRSCHKMTLDCKTGIIYVLGRLTDVDAARAPLSRQGPTNTTATGPQSSHRSQSHLPFPS LPPLPTSDPPSNTYCSDFYLYHTRGPEEGVWKYISFDTASSGGPPLVFDHQMVVDSEAQALYVFGGRVLDGDWDT YKYAGLYAYNLKSSRWKLLQPADNSPATIPPRYGHSMVLDSNTRTLFIFGGQKEEKYLSDMYTYNLSTSTVTELF SNFTLEGGPTACFTQRAVIDTDLKEIYVFCGLVTDAFGMTGYLPGDLYNWVYRYNTRPGTWTHIRPEGDRPNPKP RSVPKKVEEPRPRYAHDVVYHPRSKRLYLFGGNANLRGPKDEDAMVDDAFDGIQKMSDFWKMEVRRPGSEEIIRK ATYHIRRQQFREMCEERTPSEALNFLKTQVSPVVNHDDQKETEDYRSLTTFLLAPKASPLVIPPVFPKSASSKDN PSPLSEKSSGSIKDDWITGFG*
Coding	>AgabiH97\|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAAAACGATAGCTTTTGGAAAGTTTTCGAAACCA CATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCAAGTGTTACATGGT GGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGTATGTTTCCCAACC CGCTACGTCAAGATTGTCCCTCTATCTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAAC GGAATCTCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGCACCGAGAAAGCACTGTTCTTCGT CACGTTCTCAAGCACTTGAGACAACGCCGTCTCCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAAC GTTGAACACCCTTTAATCACCCAATTACACGCCACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCAC CTTCAAACCCTTTCTTCCTCTGGCCTCTTCTCATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGG ATATCGCAAGCAGGCGATGATGAAATACCATCCCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAA GTTATCTACCTCCACGGAGGCTACAATGGCGAGAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAG AGGTGGCACAAGCTTATGGATTCAACGCACAGTAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTG GACTGCAAGACTGGCATTATCTATGTTCTCGGCAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGC CAGGGCCCCACAAATACGACCGCCACAGGACCGCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCC CTACCTCCCCTACCGACGAGCGATCCACCTTCCAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGG CCAGAAGAAGGAGTATGGAAGTACATCTCCTTCGATACAGCCAGCAGTGGAGGCCCTCCCCTAGTCTTTGATCAC CAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACTTGATGGTGACTGGGATACT TACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACTCCAGCCCGCAGATAACTCG CCTGCTACGATACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGG GGCCAAAAAGAGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTC TCGAACTTTACCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAG ATCTACGTATTCTGCGGTCTCGTCACAGATGCTTTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGG GTGTATAGATATAATACAAGGCCAGGCACTTGGACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCC CGTTCGGTGCCAAAGAAAGTCGAGGAACCACGTCCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAG CGACTTTACCTGTTCGGTGGCAATGCGAATCTCAGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTT GATGGAATTCAGAAGATGAGCGATTTCTGGAAAATGGAAGTGCGCAGACCCGGGTCTGAGGAGATAATCAGAAAA GCTACATATCACATCCGGCGTCAACAATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTT TTGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACG TTCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAAC CCATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGTTTCGGATGA
Transcript	>AgabiH97\|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAAAACGATAGCTTTTGGAAAGTTTTCGAAACCA CATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCAAGTGTTACATGGT GGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGTATGTTTCCCAACC CGCTACGTCAAGATTGTCCCTCTATCTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAAC GGAATCTCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGCACCGAGAAAGCACTGTTCTTCGT CACGTTCTCAAGCACTTGAGACAACGCCGTCTCCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAAC GTTGAACACCCTTTAATCACCCAATTACACGCCACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCAC CTTCAAACCCTTTCTTCCTCTGGCCTCTTCTCATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGG ATATCGCAAGCAGGCGATGATGAAATACCATCCCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAA GTTATCTACCTCCACGGAGGCTACAATGGCGAGAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAG AGGTGGCACAAGCTTATGGATTCAACGCACAGTAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTG GACTGCAAGACTGGCATTATCTATGTTCTCGGCAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGC CAGGGCCCCACAAATACGACCGCCACAGGACCGCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCC CTACCTCCCCTACCGACGAGCGATCCACCTTCCAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGG CCAGAAGAAGGAGTATGGAAGTACATCTCCTTCGATACAGCCAGCAGTGGAGGCCCTCCCCTAGTCTTTGATCAC CAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACTTGATGGTGACTGGGATACT TACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACTCCAGCCCGCAGATAACTCG CCTGCTACGATACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGG GGCCAAAAAGAGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTC TCGAACTTTACCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAG ATCTACGTATTCTGCGGTCTCGTCACAGATGCTTTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGG GTGTATAGATATAATACAAGGCCAGGCACTTGGACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCC CGTTCGGTGCCAAAGAAAGTCGAGGAACCACGTCCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAG CGACTTTACCTGTTCGGTGGCAATGCGAATCTCAGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTT GATGGAATTCAGAAGATGAGCGATTTCTGGAAAATGGAAGTGCGCAGACCCGGGTCTGAGGAGATAATCAGAAAA GCTACATATCACATCCGGCGTCAACAATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTT TTGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACG TTCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAAC CCATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGTTTCGGATGA
Gene	>AgabiH97\|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAGTGTGTAGGCTTTCGTGACGCCCACCGCTTAC TGAATCTAAATGTCGTGCAATCATCAGAAACGATAGCTTTTGGAAAGGCAAGTATTCTTTCAGTCGCAAGGCTTG ATCCGCTGAAGAGTATCTTCAGTTTTCGAAACGTACGCTCTTCATGCCCAGCCCCAAAATCCGTTTCATCTGACT CGTGGTTCAAGCACATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCA AGTGTTACATGGTGGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGT ATGTTTCCCAACCCGCTACGTCAAGATTGTCCCTCTATCGTGCGTTGATGGCCTTCGCGTTGCAGTTGTTGTATA ACGATATTCTGGTCCCACAGTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAACGGAATC TCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGGTGCGAGGTTTGCCACCGCGCCAGGGCTCT CATTCACCTGAATCTCCAGCACCGAGAAAGCACTGTTCTTCGTCACGTTCTCAAGCACTTGAGACAACGCCGTCT CCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAACGTTGAACACCCTTTAATCACCCAATTACACGC CACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCACCTTCAAACCCTTTCTTCCTCTGGCCTCTTCTC ATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGGATATCGCAAGCAGGCGATGATGAAATACCATC CCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAAGTTATCTACCTCCACGGAGGCTACAATGGCGA GAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAGAGGTGGCACAAGCTTATGGATTCAACGCACAG TAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTGGACTGCAAGACTGGCATTATCTATGTTCTCGG CAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGCCAGGGCCCCACAAATACGACCGCCACAGGACC GCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCCCTACCTCCCCTACCGACGAGCGATCCACCTTC CAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGGCCAGAAGAAGGAGTATGGAAGTACATCTCCTT CGATACAGCCGTGAGTGTATACCTCCCATCTCATATGTTGCTATTCCTGAAACTCTTGCAGAGCAGTGGAGGCCC TCCCCTAGTCTTTGATCACCAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACT TGATGGTGACTGGGATACTTACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACT CCAGTATGTCTATAAGCTTCTTCTCAAGGCATTTTACTGATGAGAGTAGGCCCGCAGATAACTCGCCTGCTACGA TACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGGGGCCAAAAAG AGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTCTCGAACTTTA CCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAGATCTACGTGT AAGTCGTTCTCTACTTTCCATGATTTTTTAAACTAAGGGCTTTGGTTTAGATTCTGCGGTCTCGTCACAGATGCT TTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGGGTGTATAGATATAATACAAGGCCAGGCACTTGG ACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCCCGTTCGGTGCCAAAGAAAGTCGAGGAACCACGT CCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAGCGACTTTACCTGTTCGGTGGCAATGCGAATCTC AGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTTGATGGAATTCAGAAGATGAGCGATTTCTGGAAA ATGGAAGTGCGCAGGTGGGTGGTATATTGTATTTTTGGGCAGAAGACAAACTCAAAGGTTTGATAGACCCGGGTC TGAGGAGATAATCAGAAAAGCTACATATCACATCCGGCGTCAACAGTAGGCATTTCTTTCATTTATTGATTTATA TGCCGGGCGTTCATGGTCAACCTAGATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTTT TGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACGT TCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAACC CATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGGTCAAGGGGAACTACCCCAA GTGATGGAACATGGTCAAGCGAGTTGATGGAAGTTTCGGATGA

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