Protein ID | AgabiH97|040350 |
Gene name | |
Location | scaffold_2:485071..487964 |
Strand | - |
Gene length (bp) | 2893 |
Transcript length (bp) | 2316 |
Coding sequence length (bp) | 2316 |
Protein length (aa) | 772 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06588 | Muskelin_N | Muskelin N-terminus | 5.0E-58 | 10 | 204 |
PF13418 | Kelch_4 | Galactose oxidase, central domain | 1.6E-07 | 262 | 312 |
PF13418 | Kelch_4 | Galactose oxidase, central domain | 1.2E-08 | 481 | 524 |
PF13415 | Kelch_3 | Galactose oxidase, central domain | 6.5E-07 | 275 | 325 |
PF13854 | Kelch_5 | Kelch motif | 6.5E-07 | 259 | 298 |
PF13854 | Kelch_5 | Kelch motif | 6.8E-05 | 480 | 518 |
PF01344 | Kelch_1 | Kelch motif | 1.3E-06 | 272 | 305 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q99PV3|MKLN1_RAT | Muskelin OS=Rattus norvegicus GN=Mkln1 PE=1 SV=1 | 5 | 728 | 4.0E-140 |
sp|O89050|MKLN1_MOUSE | Muskelin OS=Mus musculus GN=Mkln1 PE=1 SV=1 | 5 | 728 | 5.0E-140 |
sp|Q5RB35|MKLN1_PONAB | Muskelin OS=Pongo abelii GN=MKLN1 PE=2 SV=1 | 5 | 728 | 1.0E-139 |
sp|Q9UL63|MKLN1_HUMAN | Muskelin OS=Homo sapiens GN=MKLN1 PE=1 SV=2 | 5 | 728 | 1.0E-139 |
sp|O13730|MDE6_SCHPO | Mei4-dependent protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mde6 PE=4 SV=2 | 10 | 707 | 5.0E-70 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q99PV3|MKLN1_RAT | Muskelin OS=Rattus norvegicus GN=Mkln1 PE=1 SV=1 | 5 | 728 | 4.0E-140 |
sp|O89050|MKLN1_MOUSE | Muskelin OS=Mus musculus GN=Mkln1 PE=1 SV=1 | 5 | 728 | 5.0E-140 |
sp|Q5RB35|MKLN1_PONAB | Muskelin OS=Pongo abelii GN=MKLN1 PE=2 SV=1 | 5 | 728 | 1.0E-139 |
sp|Q9UL63|MKLN1_HUMAN | Muskelin OS=Homo sapiens GN=MKLN1 PE=1 SV=2 | 5 | 728 | 1.0E-139 |
sp|O13730|MDE6_SCHPO | Mei4-dependent protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mde6 PE=4 SV=2 | 10 | 707 | 5.0E-70 |
sp|O14248|TEA3_SCHPO | Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1 | 410 | 515 | 7.0E-07 |
sp|O04318|JAL27_ARATH | Nitrile-specifier protein 3 OS=Arabidopsis thaliana GN=NSP3 PE=2 SV=1 | 431 | 624 | 7.0E-07 |
sp|P50090|KEL2_YEAST | Kelch repeat-containing protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL2 PE=1 SV=1 | 433 | 598 | 8.0E-07 |
sp|Q8IID4|DYHC2_PLAF7 | Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0240 PE=3 SV=1 | 429 | 563 | 3.0E-06 |
sp|O49326|JAL21_ARATH | Nitrile-specifier protein 2 OS=Arabidopsis thaliana GN=NSP2 PE=2 SV=1 | 431 | 636 | 3.0E-06 |
sp|Q58CV6|KLDC3_BOVIN | Kelch domain-containing protein 3 OS=Bos taurus GN=KLHDC3 PE=2 SV=2 | 417 | 639 | 3.0E-06 |
sp|P38853|KEL1_YEAST | Kelch repeat-containing protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL1 PE=1 SV=1 | 405 | 598 | 7.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 49 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|040350 MISPPPSVPLSYTVVQSTPHSGKYGPEHILLDKPSDQASRWSGAYQGNTAKQWILLKLDQMSVLKTIAFGKFSKP HPCNMKDFKVYVGITEENLVQVLHGGLKNDTTAEAFPIRHVNNAHVCFPTRYVKIVPLSAHGQNFHTSIWHVALN GISDKKYVDHIYRIHEEHRESTVLRHVLKHLRQRRLLTPYQDILSRAFTNVEHPLITQLHATLVLGGAFKDAEKH LQTLSSSGLFSSYLQSSHPYAVWDRISQAGDDEIPSPRSGHAMCIDAVNEVIYLHGGYNGENCLDDFWAYNIKDE RWHKLMDSTHSKNGPSTRSCHKMTLDCKTGIIYVLGRLTDVDAARAPLSRQGPTNTTATGPQSSHRSQSHLPFPS LPPLPTSDPPSNTYCSDFYLYHTRGPEEGVWKYISFDTASSGGPPLVFDHQMVVDSEAQALYVFGGRVLDGDWDT YKYAGLYAYNLKSSRWKLLQPADNSPATIPPRYGHSMVLDSNTRTLFIFGGQKEEKYLSDMYTYNLSTSTVTELF SNFTLEGGPTACFTQRAVIDTDLKEIYVFCGLVTDAFGMTGYLPGDLYNWVYRYNTRPGTWTHIRPEGDRPNPKP RSVPKKVEEPRPRYAHDVVYHPRSKRLYLFGGNANLRGPKDEDAMVDDAFDGIQKMSDFWKMEVRRPGSEEIIRK ATYHIRRQQFREMCEERTPSEALNFLKTQVSPVVNHDDQKETEDYRSLTTFLLAPKASPLVIPPVFPKSASSKDN PSPLSEKSSGSIKDDWITGFG* |
Coding | >AgabiH97|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAAAACGATAGCTTTTGGAAAGTTTTCGAAACCA CATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCAAGTGTTACATGGT GGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGTATGTTTCCCAACC CGCTACGTCAAGATTGTCCCTCTATCTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAAC GGAATCTCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGCACCGAGAAAGCACTGTTCTTCGT CACGTTCTCAAGCACTTGAGACAACGCCGTCTCCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAAC GTTGAACACCCTTTAATCACCCAATTACACGCCACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCAC CTTCAAACCCTTTCTTCCTCTGGCCTCTTCTCATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGG ATATCGCAAGCAGGCGATGATGAAATACCATCCCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAA GTTATCTACCTCCACGGAGGCTACAATGGCGAGAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAG AGGTGGCACAAGCTTATGGATTCAACGCACAGTAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTG GACTGCAAGACTGGCATTATCTATGTTCTCGGCAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGC CAGGGCCCCACAAATACGACCGCCACAGGACCGCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCC CTACCTCCCCTACCGACGAGCGATCCACCTTCCAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGG CCAGAAGAAGGAGTATGGAAGTACATCTCCTTCGATACAGCCAGCAGTGGAGGCCCTCCCCTAGTCTTTGATCAC CAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACTTGATGGTGACTGGGATACT TACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACTCCAGCCCGCAGATAACTCG CCTGCTACGATACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGG GGCCAAAAAGAGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTC TCGAACTTTACCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAG ATCTACGTATTCTGCGGTCTCGTCACAGATGCTTTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGG GTGTATAGATATAATACAAGGCCAGGCACTTGGACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCC CGTTCGGTGCCAAAGAAAGTCGAGGAACCACGTCCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAG CGACTTTACCTGTTCGGTGGCAATGCGAATCTCAGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTT GATGGAATTCAGAAGATGAGCGATTTCTGGAAAATGGAAGTGCGCAGACCCGGGTCTGAGGAGATAATCAGAAAA GCTACATATCACATCCGGCGTCAACAATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTT TTGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACG TTCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAAC CCATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGTTTCGGATGA |
Transcript | >AgabiH97|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAAAACGATAGCTTTTGGAAAGTTTTCGAAACCA CATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCAAGTGTTACATGGT GGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGTATGTTTCCCAACC CGCTACGTCAAGATTGTCCCTCTATCTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAAC GGAATCTCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGCACCGAGAAAGCACTGTTCTTCGT CACGTTCTCAAGCACTTGAGACAACGCCGTCTCCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAAC GTTGAACACCCTTTAATCACCCAATTACACGCCACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCAC CTTCAAACCCTTTCTTCCTCTGGCCTCTTCTCATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGG ATATCGCAAGCAGGCGATGATGAAATACCATCCCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAA GTTATCTACCTCCACGGAGGCTACAATGGCGAGAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAG AGGTGGCACAAGCTTATGGATTCAACGCACAGTAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTG GACTGCAAGACTGGCATTATCTATGTTCTCGGCAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGC CAGGGCCCCACAAATACGACCGCCACAGGACCGCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCC CTACCTCCCCTACCGACGAGCGATCCACCTTCCAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGG CCAGAAGAAGGAGTATGGAAGTACATCTCCTTCGATACAGCCAGCAGTGGAGGCCCTCCCCTAGTCTTTGATCAC CAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACTTGATGGTGACTGGGATACT TACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACTCCAGCCCGCAGATAACTCG CCTGCTACGATACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGG GGCCAAAAAGAGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTC TCGAACTTTACCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAG ATCTACGTATTCTGCGGTCTCGTCACAGATGCTTTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGG GTGTATAGATATAATACAAGGCCAGGCACTTGGACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCC CGTTCGGTGCCAAAGAAAGTCGAGGAACCACGTCCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAG CGACTTTACCTGTTCGGTGGCAATGCGAATCTCAGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTT GATGGAATTCAGAAGATGAGCGATTTCTGGAAAATGGAAGTGCGCAGACCCGGGTCTGAGGAGATAATCAGAAAA GCTACATATCACATCCGGCGTCAACAATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTT TTGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACG TTCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAAC CCATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGTTTCGGATGA |
Gene | >AgabiH97|040350 ATGATTTCACCGCCGCCTTCTGTGCCGTTGAGCTACACTGTTGTGCAATCAACACCGCATAGCGGAAAGTATGGG CCTGAACATATACTCCTGGACAAGCCTTCAGACCAAGCTAGCAGATGGAGCGGCGCGTACCAAGGGAACACTGCG AAACAGTGGATTTTGCTCAAGCTAGACCAGATGTCTGTTCTAAGTGTGTAGGCTTTCGTGACGCCCACCGCTTAC TGAATCTAAATGTCGTGCAATCATCAGAAACGATAGCTTTTGGAAAGGCAAGTATTCTTTCAGTCGCAAGGCTTG ATCCGCTGAAGAGTATCTTCAGTTTTCGAAACGTACGCTCTTCATGCCCAGCCCCAAAATCCGTTTCATCTGACT CGTGGTTCAAGCACATCCATGTAACATGAAAGACTTCAAGGTATACGTCGGAATTACAGAAGAAAACCTAGTCCA AGTGTTACATGGTGGCCTCAAGAATGACACGACTGCCGAAGCATTTCCCATCCGCCATGTCAACAATGCTCACGT ATGTTTCCCAACCCGCTACGTCAAGATTGTCCCTCTATCGTGCGTTGATGGCCTTCGCGTTGCAGTTGTTGTATA ACGATATTCTGGTCCCACAGTGCGCATGGCCAGAATTTCCATACTTCAATATGGCACGTTGCATTGAACGGAATC TCGGATAAGAAATATGTTGATCACATATACCGCATACATGAGGAGGTGCGAGGTTTGCCACCGCGCCAGGGCTCT CATTCACCTGAATCTCCAGCACCGAGAAAGCACTGTTCTTCGTCACGTTCTCAAGCACTTGAGACAACGCCGTCT CCTTACTCCATATCAAGATATCCTCTCGCGAGCTTTCACAAACGTTGAACACCCTTTAATCACCCAATTACACGC CACTCTGGTTCTTGGAGGTGCATTTAAAGATGCGGAGAAGCACCTTCAAACCCTTTCTTCCTCTGGCCTCTTCTC ATCGTATCTCCAATCTTCACATCCTTATGCAGTATGGGACAGGATATCGCAAGCAGGCGATGATGAAATACCATC CCCGAGGAGCGGTCACGCCATGTGTATAGACGCTGTTAATGAAGTTATCTACCTCCACGGAGGCTACAATGGCGA GAATTGTTTGGACGATTTTTGGGCGTATAACATCAAAGACGAGAGGTGGCACAAGCTTATGGATTCAACGCACAG TAAAAATGGACCAAGTACTAGAAGCTGTCATAAGATGACTTTGGACTGCAAGACTGGCATTATCTATGTTCTCGG CAGATTAACAGATGTTGATGCTGCCAGGGCGCCTCTTTCTCGCCAGGGCCCCACAAATACGACCGCCACAGGACC GCAGAGCTCTCATAGATCCCAATCTCACTTACCTTTCCCTTCCCTACCTCCCCTACCGACGAGCGATCCACCTTC CAACACCTATTGTTCTGATTTCTACCTCTATCACACAAGAGGGCCAGAAGAAGGAGTATGGAAGTACATCTCCTT CGATACAGCCGTGAGTGTATACCTCCCATCTCATATGTTGCTATTCCTGAAACTCTTGCAGAGCAGTGGAGGCCC TCCCCTAGTCTTTGATCACCAGATGGTTGTCGATAGCGAAGCGCAAGCTCTCTACGTCTTCGGTGGGCGAGTACT TGATGGTGACTGGGATACTTACAAATATGCTGGTCTATATGCGTATAACCTTAAGTCGTCACGGTGGAAATTACT CCAGTATGTCTATAAGCTTCTTCTCAAGGCATTTTACTGATGAGAGTAGGCCCGCAGATAACTCGCCTGCTACGA TACCCCCACGCTACGGTCACTCAATGGTTTTGGACTCGAACACGAGAACTTTATTTATCTTCGGGGGCCAAAAAG AGGAGAAATATCTTTCAGACATGTACACGTACAATCTGAGTACGAGTACTGTCACAGAGTTATTCTCGAACTTTA CCCTGGAAGGTGGACCAACTGCATGCTTTACTCAAAGAGCGGTGATTGATACCGACTTGAAGGAGATCTACGTGT AAGTCGTTCTCTACTTTCCATGATTTTTTAAACTAAGGGCTTTGGTTTAGATTCTGCGGTCTCGTCACAGATGCT TTCGGTATGACGGGATATCTTCCAGGGGACCTCTACAACTGGGTGTATAGATATAATACAAGGCCAGGCACTTGG ACCCATATTCGGCCTGAAGGCGATCGACCAAATCCGAAACCCCGTTCGGTGCCAAAGAAAGTCGAGGAACCACGT CCGAGATATGCGCACGATGTCGTATATCACCCCAGATCTAAGCGACTTTACCTGTTCGGTGGCAATGCGAATCTC AGGGGTCCAAAGGACGAGGATGCGATGGTAGACGATGCGTTTGATGGAATTCAGAAGATGAGCGATTTCTGGAAA ATGGAAGTGCGCAGGTGGGTGGTATATTGTATTTTTGGGCAGAAGACAAACTCAAAGGTTTGATAGACCCGGGTC TGAGGAGATAATCAGAAAAGCTACATATCACATCCGGCGTCAACAGTAGGCATTTCTTTCATTTATTGATTTATA TGCCGGGCGTTCATGGTCAACCTAGATTCCGTGAAATGTGCGAGGAAAGAACGCCCTCTGAGGCACTCAATTTTT TGAAAACCCAAGTCTCTCCTGTTGTCAACCATGACGATCAAAAGGAAACAGAAGACTATCGGTCTCTAACGACGT TCCTCCTCGCACCAAAAGCATCTCCGCTCGTCATACCTCCTGTCTTTCCTAAATCTGCGTCATCCAAGGATAACC CATCACCATTATCGGAAAAAAGCTCAGGAAGTATCAAAGACGACTGGATAACGGGGTCAAGGGGAACTACCCCAA GTGATGGAACATGGTCAAGCGAGTTGATGGAAGTTTCGGATGA |