Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|038390
Gene name
Locationscaffold_13:1294282..1295343
Strand+
Gene length (bp)1061
Transcript length (bp)957
Coding sequence length (bp)957
Protein length (aa) 319

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 3.4E-12 48 302
PF12146 Hydrolase_4 Serine aminopeptidase, S33 2.5E-06 49 169
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 3.0E-06 49 305

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|C3K630|LAAA_PSEFS L-amino acid amidase OS=Pseudomonas fluorescens (strain SBW25) GN=laaA PE=3 SV=1 33 316 1.0E-65
sp|Q76KX0|LAAA_PSEAZ L-amino acid amidase OS=Pseudomonas azotoformans GN=laaA PE=1 SV=1 33 316 1.0E-64
sp|C0ZKI1|PIP_BREBN Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pip PE=3 SV=1 48 314 7.0E-49
sp|P46541|PIP_BACCO Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2 41 315 6.0E-47
sp|Q97UA2|PIP_SULSO Proline iminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pip PE=3 SV=1 35 316 3.0E-41
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Swissprot ID Swissprot Description Start End E-value
sp|C3K630|LAAA_PSEFS L-amino acid amidase OS=Pseudomonas fluorescens (strain SBW25) GN=laaA PE=3 SV=1 33 316 1.0E-65
sp|Q76KX0|LAAA_PSEAZ L-amino acid amidase OS=Pseudomonas azotoformans GN=laaA PE=1 SV=1 33 316 1.0E-64
sp|C0ZKI1|PIP_BREBN Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pip PE=3 SV=1 48 314 7.0E-49
sp|P46541|PIP_BACCO Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2 41 315 6.0E-47
sp|Q97UA2|PIP_SULSO Proline iminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pip PE=3 SV=1 35 316 3.0E-41
sp|A5I3F5|PIP_CLOBH Proline iminopeptidase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pip PE=3 SV=1 31 317 9.0E-40
sp|Q890D8|PIP_LACPL Proline iminopeptidase OS=Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=pip PE=3 SV=2 33 307 3.0E-33
sp|Q97A76|PIP_THEVO Proline iminopeptidase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=pip PE=3 SV=1 49 318 2.0E-32
sp|Q03NE0|PIP_LACBA Proline iminopeptidase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pip PE=3 SV=1 30 306 2.0E-31
sp|C7TMK0|PIP_LACRL Proline iminopeptidase OS=Lactobacillus rhamnosus (strain Lc 705) GN=pip PE=3 SV=1 31 315 4.0E-31
sp|P96084|PIP_THEAC Proline iminopeptidase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=pip PE=1 SV=1 49 314 8.0E-31
sp|P46542|PIP_LACDL Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. lactis GN=pip PE=1 SV=1 33 314 8.0E-31
sp|P46544|PIP_LACDE Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pepIP PE=1 SV=2 33 314 1.0E-30
sp|Q1G8L9|PIP_LACDA Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778) GN=pepIP PE=3 SV=1 33 314 1.0E-30
sp|Q184M8|PIP_PEPD6 Proline iminopeptidase OS=Peptoclostridium difficile (strain 630) GN=pip PE=3 SV=1 30 317 1.0E-30
sp|A5FIF5|PIP_FLAJ1 Proline iminopeptidase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=fpaP PE=3 SV=2 49 316 3.0E-24
sp|O05420|PIP_ELIME Proline iminopeptidase OS=Elizabethkingia meningoseptica GN=fpaP PE=1 SV=1 49 316 5.0E-24
sp|P52278|PIP_LACHE Proline iminopeptidase OS=Lactobacillus helveticus GN=pip PE=1 SV=1 17 316 1.0E-23
sp|A8YWL3|PIP_LACH4 Proline iminopeptidase OS=Lactobacillus helveticus (strain DPC 4571) GN=pip PE=3 SV=1 17 316 1.0E-23
sp|Q5FMT1|PIP_LACAC Proline iminopeptidase OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) GN=pip PE=3 SV=1 17 314 3.0E-23
sp|C7PDD8|PIP_CHIPD Proline iminopeptidase OS=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_0261 PE=3 SV=2 49 316 1.0E-21
sp|D5H0J3|PIP_LACCS Proline iminopeptidase OS=Lactobacillus crispatus (strain ST1) GN=pip PE=3 SV=1 17 316 6.0E-21
sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 50 174 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|038390
MASTTSTESTSKIVNSVEGELVWEAPNAGKECRTFYKVYGDLKSGVRPLVCVHGGPGVSSHYLDVLSDITLERSI
PIVLYDQIGNGRSTHFQEKGGDLSFWKEELFLEELKSLLVHLGIYDDYDLLGHAWGGMLASRHSVRNPGGLKRLI
IWSSASSSALWLEAQAVLRKKLPQNVQDVIDRCEREGTTATQEFQEAVAVFYGRHLCTLDPVPAAMQESIRYMKT
NPIIYHTLNGPTEFTMVGPNKDFSMLDEAHKISVPTLLMNGWHDQAADSCMYPYFKLIPRVRWVQFANSSQVAHL
EEREKFMEIVGLFLTEDI*
Coding >AgabiH97|038390
ATGGCTTCCACAACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT
CCTAACGCCGGAAAGGAATGTAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGTGTTCGCCCATTGGTC
TGCGTTCATGGAGGGCCTGGTGTCAGTTCGCACTACCTCGACGTGTTATCCGATATCACGCTGGAGAGGTCAATT
CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGTGATTTATCGTTC
TGGAAGGAAGAGTTGTTTTTAGAGGAGCTGAAGTCTTTGTTGGTTCATCTCGGGATCTATGATGATTATGATCTC
CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGAACCCAGGAGGGTTGAAACGCCTAATC
ATCTGGTCTTCAGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTACTCCGGAAGAAGCTCCCACAGAAC
GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC
TTTTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG
AATCCGATCATTTACCACACACTGAATGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATG
TTGGACGAGGCGCATAAGATTTCCGTTCCGACTCTCTTGATGAACGGCTGGCATGATCAGGCGGCTGACAGCTGC
ATGTATCCTTATTTCAAGCTAATCCCTCGTGTTCGCTGGGTTCAGTTCGCGAATTCCAGCCAGGTGGCGCATCTC
GAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACCGAAGACATTTAG
Transcript >AgabiH97|038390
ATGGCTTCCACAACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT
CCTAACGCCGGAAAGGAATGTAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGTGTTCGCCCATTGGTC
TGCGTTCATGGAGGGCCTGGTGTCAGTTCGCACTACCTCGACGTGTTATCCGATATCACGCTGGAGAGGTCAATT
CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGTGATTTATCGTTC
TGGAAGGAAGAGTTGTTTTTAGAGGAGCTGAAGTCTTTGTTGGTTCATCTCGGGATCTATGATGATTATGATCTC
CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGAACCCAGGAGGGTTGAAACGCCTAATC
ATCTGGTCTTCAGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTACTCCGGAAGAAGCTCCCACAGAAC
GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC
TTTTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG
AATCCGATCATTTACCACACACTGAATGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATG
TTGGACGAGGCGCATAAGATTTCCGTTCCGACTCTCTTGATGAACGGCTGGCATGATCAGGCGGCTGACAGCTGC
ATGTATCCTTATTTCAAGCTAATCCCTCGTGTTCGCTGGGTTCAGTTCGCGAATTCCAGCCAGGTGGCGCATCTC
GAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACCGAAGACATTTAG
Gene >AgabiH97|038390
ATGGCTTCCACAACTTCTACCGAATCCACCTCTAAAATTGTCAATTCCGTTGAAGGAGAATTGGTATGGGAGGCT
CCTAACGCCGGAAAGGAATGTAGAACTTTTTACAAGGTATATGGTGATTTGAAGTCGGGTGTTCGCCCATTGGTC
TGCGTTCATGGAGGGCCTGGTGTCAGTTCGCACTACCTCGACGTGTTATCCGATATCACGCTGGAGAGGTCAATT
CCCATTGTTCTTTACGACCAGATTGGGAACGGACGTTCTACGCACTTTCAGGAGAAGGGAGGTGATTTATCGTTC
TGGAAGGAAGAGTTGTTTTTAGAGGAGCTGAAGTCTTTGTTGGTTCATCTCGGGATCTATGATGATTATGATCTC
CTCGGCCATGCCTGGGGTGGAATGTTAGCTTCTCGTCACTCGGTCAGGAACCCAGGAGGGTTGAAACGCCTAATC
ATCTGGTCTTCAGCATCCTCGAGCGCCCTCTGGCTCGAAGCCCAAGCAGTACTCCGGAAGAAGCTCCCACAGAAC
GTTCAAGACGTTATCGATAGATGTGAAAGAGAGGGTACAACCGCCACTCAAGAATTCCAAGAGGCTGTCGCTGTC
TTTTATGGTCGACACCTTTGTACGCTCGACCCGGTGCCTGCGGCGATGCAAGAGAGCATCCGTTACATGAAAACG
AATCCGATCATTTACCACACACTGTAAGGCTGGCTCTCATATTCTGCATCATACTCACAACTTTATTTATAGGAA
TGGTCCAACAGAATTTACTATGGTTGGCCCAAACAAAGATTTTTCGATGTTGGACGAGGCGCATAAGATTTCCGT
TCCGACTCTCTTGATGAACGGCTGGCATGATCAGGCGGCTGACAGCTGCATGTATCCTTATTTCAAGCTAATCCC
TCGTGTTCGCTGGGTTCAGTTCGCGGTACGTCTTCTAAGAATGTGTGGCTGTGGTGGACTTCTGATAAACGGGTA
TGTAGAATTCCAGCCAGGTGGCGCATCTCGAGGAGCGTGAAAAGTTCATGGAAATCGTCGGTCTTTTCTTGACCG
AAGACATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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