© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|038350 |
| Gene name | |
| Location | scaffold_13:1284896..1287314 |
| Strand | + |
| Gene length (bp) | 2418 |
| Transcript length (bp) | 1587 |
| Coding sequence length (bp) | 1587 |
| Protein length (aa) | 529 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-26 | 73 | 438 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 26 | 527 | 6.0E-93 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 32 | 528 | 3.0E-92 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 31 | 528 | 9.0E-88 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 12 | 528 | 1.0E-87 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 9 | 528 | 2.0E-84 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 26 | 527 | 6.0E-93 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 32 | 528 | 3.0E-92 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 31 | 528 | 9.0E-88 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 12 | 528 | 1.0E-87 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 9 | 528 | 2.0E-84 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 12 | 527 | 2.0E-82 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 7 | 526 | 1.0E-79 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 9 | 526 | 1.0E-72 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 27 | 528 | 2.0E-59 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 1 | 491 | 9.0E-47 |
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 38 | 507 | 2.0E-44 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 9 | 483 | 3.0E-37 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 49 | 502 | 7.0E-36 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 5 | 527 | 9.0E-32 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 63 | 270 | 1.0E-18 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 52 | 485 | 1.0E-16 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 59 | 345 | 7.0E-16 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 59 | 345 | 1.0E-15 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 56 | 514 | 3.0E-14 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 60 | 301 | 3.0E-14 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 12 | 372 | 8.0E-14 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 60 | 263 | 1.0E-13 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 63 | 276 | 2.0E-12 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 2 | 434 | 3.0E-12 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 143 | 264 | 9.0E-11 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 59 | 378 | 4.0E-07 |
| sp|Q2TYT2|BXLB_ASPOR | Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bxlB PE=3 SV=1 | 69 | 110 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 140 | 162 | 22 |
| 2 | 164 | 186 | 22 |
| 3 | 196 | 218 | 22 |
| 4 | 225 | 247 | 22 |
| 5 | 327 | 349 | 22 |
| 6 | 361 | 380 | 19 |
| 7 | 390 | 412 | 22 |
| 8 | 419 | 441 | 22 |
| 9 | 451 | 473 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|038350 MKPQAPSLLESDEKHAASEKELKSELKDDAYVSSKEVDSGAELAAEAADLILDPKEAIRIRRKIDLHIIPLMCVL YWIQFMDKTTLGSAAILGIRESAHLTVNQYNWLGTIFYLSYLAFEFPQNLCLQRFPVAKWMSFNIFVWSIALACH AACTNFAGLFVVRLILGACEGSITAGFLIVTSMFYTRNEQTVRVGWWFLMNGTAQIIMGFISFGVAHIGTGKFQP WQWLMVITGLMTLLTSISFWLWFPDSPKTAWFLTRDEKVKAIRRIMENQTGVENKSFKKEQVYEALMDPKTWLFA LFSAANNVPNSITNQRSIIVNSFGFTVLQTTLLGIVDGVIEIATIWIGVEICARIPNSRAYISCIFFIPNILGTF LINFLPWENKIGLLFSQWITGVGTTGFVLALAWVSCVTAGHTKRVTVNAIMLSAYCIGNAVGPFMWQARYKPRNH VPWIVTGVCYASNIFVMLALRWVMTRENKRRDSEPRDTTYDEVYLERENGDGTIDKIRVDKEFLDLTDMQNRDFR YVL* |
| Coding | >AgabiH97|038350 ATGAAGCCACAGGCCCCTTCGCTTTTGGAATCGGATGAAAAACATGCCGCTTCCGAGAAAGAGCTCAAGTCTGAG CTCAAGGACGACGCTTATGTATCCTCGAAAGAGGTAGATTCTGGAGCAGAACTCGCTGCGGAAGCTGCGGATCTG ATACTCGATCCGAAGGAGGCGATCAGAATACGACGCAAGATTGACTTGCATATCATACCCCTTATGTGTGTGCTG TACTGGATTCAGTTCATGGATAAAACGACTTTGGGGAGCGCCGCTATTTTAGGCATCAGGGAATCTGCTCATCTG ACCGTCAACCAATACAACTGGCTCGGAACAATCTTTTACCTTAGCTATCTTGCGTTCGAATTTCCCCAGAATTTG TGTCTGCAACGATTTCCGGTCGCCAAATGGATGAGTTTCAACATATTCGTTTGGTCTATAGCACTTGCTTGTCAT GCTGCCTGCACGAATTTCGCAGGTCTTTTCGTTGTCAGATTGATCCTTGGGGCATGCGAGGGTTCCATTACCGCC GGTTTTCTGATTGTCACATCCATGTTCTACACGAGGAATGAGCAGACAGTTCGAGTGGGGTGGTGGTTTTTAATG AACGGAACAGCTCAAATCATCATGGGTTTCATCAGCTTTGGCGTAGCTCACATTGGTACTGGAAAGTTTCAACCT TGGCAATGGTTGATGGTAATTACTGGGTTAATGACATTGCTAACGTCGATATCGTTCTGGTTGTGGTTCCCTGAT TCGCCAAAAACTGCATGGTTCCTAACGAGGGACGAGAAAGTGAAAGCGATCAGGAGAATCATGGAAAACCAAACT GGAGTGGAAAATAAGAGCTTCAAGAAAGAGCAGGTATACGAGGCGCTTATGGACCCGAAGACATGGCTTTTCGCC CTTTTCTCCGCCGCCAACAACGTTCCGAACTCGATCACAAATCAAAGATCCATCATAGTGAACAGTTTCGGCTTC ACTGTCCTCCAGACGACCCTTCTAGGGATCGTGGATGGTGTAATAGAAATCGCTACCATCTGGATTGGAGTTGAA ATCTGTGCCCGGATTCCCAACAGTCGCGCCTACATTAGCTGCATCTTCTTCATACCCAATATACTCGGCACCTTC TTAATCAACTTCTTGCCATGGGAGAACAAAATTGGACTCCTTTTCTCTCAATGGATCACTGGCGTGGGCACCACC GGATTTGTGCTTGCATTGGCCTGGGTATCTTGCGTCACCGCTGGCCATACAAAGAGGGTGACTGTCAACGCTATC ATGCTATCAGCCTATTGTATTGGCAATGCTGTGGGACCTTTCATGTGGCAAGCACGTTATAAACCGAGGAATCAC GTTCCTTGGATTGTCACTGGCGTTTGCTATGCATCCAACATATTCGTCATGCTAGCTTTGCGCTGGGTGATGACC AGGGAGAACAAGCGCCGTGATAGTGAACCCCGCGATACGACTTATGATGAAGTATACCTTGAACGCGAAAATGGA GACGGGACTATCGATAAGATACGAGTTGACAAGGAATTTTTGGATCTTACGGATATGCAAAACCGTGACTTCCGC TACGTCTTGTAA |
| Transcript | >AgabiH97|038350 ATGAAGCCACAGGCCCCTTCGCTTTTGGAATCGGATGAAAAACATGCCGCTTCCGAGAAAGAGCTCAAGTCTGAG CTCAAGGACGACGCTTATGTATCCTCGAAAGAGGTAGATTCTGGAGCAGAACTCGCTGCGGAAGCTGCGGATCTG ATACTCGATCCGAAGGAGGCGATCAGAATACGACGCAAGATTGACTTGCATATCATACCCCTTATGTGTGTGCTG TACTGGATTCAGTTCATGGATAAAACGACTTTGGGGAGCGCCGCTATTTTAGGCATCAGGGAATCTGCTCATCTG ACCGTCAACCAATACAACTGGCTCGGAACAATCTTTTACCTTAGCTATCTTGCGTTCGAATTTCCCCAGAATTTG TGTCTGCAACGATTTCCGGTCGCCAAATGGATGAGTTTCAACATATTCGTTTGGTCTATAGCACTTGCTTGTCAT GCTGCCTGCACGAATTTCGCAGGTCTTTTCGTTGTCAGATTGATCCTTGGGGCATGCGAGGGTTCCATTACCGCC GGTTTTCTGATTGTCACATCCATGTTCTACACGAGGAATGAGCAGACAGTTCGAGTGGGGTGGTGGTTTTTAATG AACGGAACAGCTCAAATCATCATGGGTTTCATCAGCTTTGGCGTAGCTCACATTGGTACTGGAAAGTTTCAACCT TGGCAATGGTTGATGGTAATTACTGGGTTAATGACATTGCTAACGTCGATATCGTTCTGGTTGTGGTTCCCTGAT TCGCCAAAAACTGCATGGTTCCTAACGAGGGACGAGAAAGTGAAAGCGATCAGGAGAATCATGGAAAACCAAACT GGAGTGGAAAATAAGAGCTTCAAGAAAGAGCAGGTATACGAGGCGCTTATGGACCCGAAGACATGGCTTTTCGCC CTTTTCTCCGCCGCCAACAACGTTCCGAACTCGATCACAAATCAAAGATCCATCATAGTGAACAGTTTCGGCTTC ACTGTCCTCCAGACGACCCTTCTAGGGATCGTGGATGGTGTAATAGAAATCGCTACCATCTGGATTGGAGTTGAA ATCTGTGCCCGGATTCCCAACAGTCGCGCCTACATTAGCTGCATCTTCTTCATACCCAATATACTCGGCACCTTC TTAATCAACTTCTTGCCATGGGAGAACAAAATTGGACTCCTTTTCTCTCAATGGATCACTGGCGTGGGCACCACC GGATTTGTGCTTGCATTGGCCTGGGTATCTTGCGTCACCGCTGGCCATACAAAGAGGGTGACTGTCAACGCTATC ATGCTATCAGCCTATTGTATTGGCAATGCTGTGGGACCTTTCATGTGGCAAGCACGTTATAAACCGAGGAATCAC GTTCCTTGGATTGTCACTGGCGTTTGCTATGCATCCAACATATTCGTCATGCTAGCTTTGCGCTGGGTGATGACC AGGGAGAACAAGCGCCGTGATAGTGAACCCCGCGATACGACTTATGATGAAGTATACCTTGAACGCGAAAATGGA GACGGGACTATCGATAAGATACGAGTTGACAAGGAATTTTTGGATCTTACGGATATGCAAAACCGTGACTTCCGC TACGTCTTGTAA |
| Gene | >AgabiH97|038350 ATGAAGCCACAGGCCCCTTCGCTTTTGGAATCGGATGAAAAACATGCCGCTTCCGAGAAAGAGCTCAAGTCTGAG CTCAAGGACGACGCTTATGTATCCTCGAAAGAGGTAGATTCTGGAGCAGAACTCGCTGCGGAAGCTGCGGATCTG ATACTCGATCCGAAGGAGGCGATCAGAATACGGTATGCTTTCTGGACATTATCGTGAGGAATGAGTACTCATAAA GCGATTAGACGCAAGATTGACTTGCATATCATACCCCTTATGTGTGGTAAGTGATCTGTCCGAACCTTTCTACGT TACACAGAAACTCAATCAGCGTTTAGTGCTGTACTGGTGCGTGTATATAGGACGCCGATCTCCACCGGTCACCTC AGACCTTTCGTAGGATTCAGTTCATGGATAAAACGACTTTGGGGAGCGCCGCTATTTTAGGCATCAGGTATGGCT CGCTCCCTTATCCCCGCATCAATCTAATTCTGACTTGGTTTTCCTAGGGAATCTGCTCATCTGACCGTCAACCAG TATGGATCTATGATAAAAATATCGAGACTAACACATGCTCATGCGTTAACAGATACAACTGGTAAATCCACTATC CTGGTCCTTCTAAGCGATTGAGTGATTAAGCACCGCCTAGGCTCGGAACAATCTTTTACCTTAGCTATCTTGCGT TCGAATTTCCCCAGAATTTGTGTCTGCAACGATTTCCGGTCGCCAAATGGATGAGGTAACGATAAATGCCCAATT CAATTTAACGCCTCTAAGTATACGTTTCTAGTTTCAACATATTCGTTTGGTCTATAGCACTTGCTTGTCATGCTG CCTGCACGAATTTCGCAGGTCTTTTCGTTGTCAGATTGATCCTTGGGGCATGCGAGGGTTCCATTACCGCCGGTT TTCTGATTGTCACATCCATGTTCTACACGAGGAATGAGCAGACAGTTCGAGTGGGGTGGTGGTGTGAGTCAGGTT CATCTTTCATTGTTTTCTTGCGCTCAATGAATGTTTTCCAGTTTTAATGAACGGAACAGGTTTGAGTCTCAAACA TTGTGATAGTGGTGATTTCTAATATAGCTGAACGTTAGCTCAAATCATCATGGGTTTCATCAGCTTTGGCGTAGC TCACATTGGTACTGGAAAGTTTCAACCTTGGCAATGGTACTGTGCGCTTGCCGTCATCGAGTTGAATGCTAAAAC ATTTTAGGTTGATGGTAATTACTGGGTTAATGACATTGCTAACGTCGATATCGTTCTGGTATGTGTTTGTACCCT TCTTTATACCCCGGGCGCCACTCAATTGAGCACAGGTTGTGGTTCCCTGATTCGCCAAAAACTGCATGGTTCCTA ACGAGGGACGAGAAAGTGAAAGCGATCAGGAGAATCATGGTGAGTCCGCAACTCTACCTGGTTTCATGAGACTTA ATGAAACGACAGGAAAACCAAACTGGAGTGGAAAATAAGAGCTTCAAGAAAGAGCAGTCTGTAATGTCTTACTGA TGCCTTTTAATTTCACTCATGGGAGTTTTTCAGGGTATACGAGGCGCTTATGGACCCGAAGACATGGCTTTTCGC CCTTTTCTCCGCCGCCAACAACGTTCCGAACTCGATCACAAATCAAAGATCCATCATAGTGAACAGTTTCGGCTT CACTGTCCTCCAGACGACCCTTCTAGGGATCGTGGATGGTGTAATAGAAATCGCTACCATCTGGATTGGAGTTGA AATCTGTGCCCGGATTCCCAACAGTCGCGCCTACATTAGCTGCATCTTCTTCATACCCAATATACTCGGCACCTT CTTAATCAACTTCTTGCCATGGGAGAACAAAATTGGACTCCTTTTCTCTCAATGGATCACTGGTGTGTGGGAGCC TAACGCATCGTTACCATCGCTGACTATCAGTTTTTAGGCGTGGGCACCACCGGATTTGTGCTTGCATTGGCCTGG GTATCTTGCGTCACCGCTGGCCATACAAAGAGGGTGACTGTCAACGCTATCATGCTATCAGCCTATTGTATTGGC AATGCTGTGGGACCTTTCATGTGGCAAGCACGTTATAAACCGAGGTGAGGTGTTCCGTTGGTCTGGATGAATTCC CATCCTTATAGACTTGATTAGGAATCACGTTCCTTGGATTGTCACTGGCGTTTGCTATGCATCCAACATATTCGT CATGCTAGCTTTGCGCTGGGTGATGACCAGGGAGAACAAGCGCCGTGATAGTGAACCCCGCGATACGACTTATGA TGAAGTATACCTTGAACGCGAAAATGGAGACGGGACTATCGATAAGATACGAGTTGACAAGGTAGGCATAGGAGA ACACTTGATGAACCAAAATACCAATCGATTACTTTCCAGGAATTTTTGGATCTTACGGATATGCAAAACCGTGAC TTCCGCTACGTCTTGTAA |