Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|038290
Gene name
Locationscaffold_13:1266755..1268177
Strand-
Gene length (bp)1422
Transcript length (bp)1422
Coding sequence length (bp)1422
Protein length (aa) 474

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 1.7E-06 61 118

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5979 0.6953 0.0669 0.0615 0.2856 0.0053 0.0625 0.1862 0.0577 0.0182

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup12284
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|038290
Agaricus bisporus var bisporus H97 AgabiH97|038290 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|038290
MEFVKANPHCDYRPQDDYPHTLTNLVQINEQVNSLNDHIRDLFKIRSTLLHRSNQLRSLASTLPPKILSNIFRKL
VDPDFALGEPSAPFRLRQSFTLSSVSTHWRHVALGTPQLWEDMHCIVANNNQSVEHLISLLQHCSSCAHTLNLLL
SLPSFENAREVLHTLTQALFSSEIKEKVRSLTLCWPPAHWLSMISRLTSLRSLYILGYNASDRDNFRLYTLATVP
TSLRSLHVEDVPMFDTPILRLCQNIEFCIYRPGSPIVPVSYSEPLILGKLERLIMPAGHGLQTVTSAGNLLLPSL
KYLELEHRGFHDLDFYPDIIIHFCRQVSKTLLGLTIRCSGPQWSVDALRILFKSLPHLQEFHAEDWIAAPINVIQ
ALISDKDSNRETDCLPRLTTLSLHEEPNNGGSLPSRSYFDLVLELMKSRRTSEGPLFHVDIAGRSFVALTPEMKE
ELKSVVNNYQILVTNRKQKLPWL*
Coding >AgabiH97|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTGTAACGTCTGCGGGAAACTTGCTGTTGCCCTCACTC
AAGTATTTGGAATTAGAGCACCGGGGTTTTCATGACCTCGACTTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTGTCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGATGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCAAGAATTTCACGCCGAGGACTGGATAGCTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTGACAAGGACAGCAACCGGGAGACTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATAACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTAATGAAGAGTAGGCGG
ACTAGTGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTGTGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Transcript >AgabiH97|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTGTAACGTCTGCGGGAAACTTGCTGTTGCCCTCACTC
AAGTATTTGGAATTAGAGCACCGGGGTTTTCATGACCTCGACTTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTGTCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGATGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCAAGAATTTCACGCCGAGGACTGGATAGCTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTGACAAGGACAGCAACCGGGAGACTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATAACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTAATGAAGAGTAGGCGG
ACTAGTGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTGTGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA
Gene >AgabiH97|038290
ATGGAGTTTGTAAAAGCTAATCCACACTGCGACTATCGTCCACAAGACGATTACCCCCATACGCTAACAAATCTC
GTGCAAATCAACGAGCAAGTCAACAGCCTCAACGACCATATTCGCGACTTGTTCAAGATACGCAGCACTTTGCTT
CATCGCTCAAATCAGCTTCGCTCCTTAGCTTCCACCCTTCCCCCTAAAATCTTGTCAAACATATTTCGCAAGTTG
GTCGATCCTGACTTTGCACTAGGTGAACCCAGCGCACCCTTCCGCCTCCGTCAATCTTTCACTCTTAGTTCGGTA
TCGACTCACTGGCGTCATGTAGCATTGGGGACACCGCAGTTGTGGGAGGATATGCATTGTATCGTTGCTAACAAC
AATCAGTCGGTTGAACACCTCATTTCTTTGCTTCAACACTGCTCTTCCTGCGCTCATACTCTGAATCTTTTACTG
TCGCTCCCGTCTTTCGAGAATGCCAGGGAGGTCCTGCACACACTTACTCAAGCACTTTTCTCAAGTGAAATCAAG
GAGAAAGTGAGGAGCCTAACGCTGTGCTGGCCGCCAGCTCATTGGCTCTCAATGATCTCTCGGTTGACCAGCCTT
CGTTCTCTGTACATCCTTGGTTATAACGCCTCAGACCGGGATAATTTCCGTCTGTACACACTCGCTACTGTTCCC
ACTTCCCTGCGGTCGCTGCACGTGGAAGATGTACCAATGTTTGACACTCCCATTCTGCGTCTGTGTCAAAACATC
GAATTTTGCATTTATCGACCTGGAAGTCCCATTGTTCCAGTTTCTTACTCTGAACCTCTTATCCTTGGAAAGCTC
GAACGCTTGATTATGCCAGCTGGGCATGGTCTTCAGACTGTAACGTCTGCGGGAAACTTGCTGTTGCCCTCACTC
AAGTATTTGGAATTAGAGCACCGGGGTTTTCATGACCTCGACTTTTACCCCGACATCATCATCCACTTCTGTCGC
CAAGTGTCTAAAACACTTCTAGGGCTTACTATTCGTTGTTCCGGACCCCAATGGTCAGTTGATGCACTACGAATA
TTATTTAAATCCCTCCCACATCTTCAAGAATTTCACGCCGAGGACTGGATAGCTGCCCCCATCAATGTCATTCAA
GCGCTCATATCTGACAAGGACAGCAACCGGGAGACTGATTGCTTGCCGCGCCTAACTACTTTGTCGCTGCATGAA
GAACCTAATAACGGTGGCAGTCTTCCGAGTCGTTCATATTTTGACCTGGTCCTGGAGTTAATGAAGAGTAGGCGG
ACTAGTGAGGGGCCTCTTTTCCATGTCGACATCGCGGGACGTTCCTTTGTGGCTCTGACCCCGGAAATGAAAGAA
GAATTGAAATCCGTCGTCAATAATTATCAGATCTTAGTCACAAATAGGAAGCAAAAATTACCGTGGTTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail