Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|038230
Gene name
Locationscaffold_13:1255535..1256879
Strand-
Gene length (bp)1344
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|038230
MPSFLSLLSLLGLLSTRGVFASPYYSIDHGLNVTMVQRADVSKCAALSIDDAKKMPGWAKLERYAKDKWGDGDWN
IVTNPEDFLGRPANACVDDSTSNITPKGSPQCTSRVQNLSGTSDGTDGEQVVSVSTGQSTEGSWTVSQSSSFNIG
TSFTVDVGFEGLFDASTSITTSTTFENSSGRSFSTTTDSTGTQQVTTKTKDGQNCGTMLEVITCNQEGEGKVRIV
ASGYVWFNYEDRRAPKNDPDGDEHYKYSAHIDDILTLDERSSWMSFNGAVKGISNGHYNQFCNDDVVD*
Coding >AgabiH97|038230
ATGCCATCTTTTCTTTCTCTCCTCTCTTTGCTTGGACTCTTGTCTACTAGGGGTGTATTTGCTTCGCCATACTAT
TCGATAGACCACGGACTCAACGTGACTATGGTTCAAAGAGCAGATGTCTCTAAATGCGCTGCTCTCAGTATCGAC
GATGCAAAAAAGATGCCTGGTTGGGCCAAATTGGAACGGTATGCAAAGGATAAATGGGGCGATGGCGACTGGAAT
ATCGTCACCAACCCTGAAGATTTCCTAGGCCGTCCAGCTAATGCCTGTGTTGACGATAGCACTTCCAATATCACT
CCCAAAGGTTCTCCTCAGTGCACCAGCCGTGTCCAAAATCTGTCAGGTACCTCAGATGGTACAGATGGTGAACAA
GTAGTCTCAGTTTCCACTGGACAGAGCACCGAAGGCAGTTGGACTGTTTCCCAATCCTCGTCATTCAATATCGGT
ACTTCGTTCACCGTAGACGTTGGTTTTGAAGGACTCTTCGATGCATCTACGTCGATTACAACCTCCACCACGTTC
GAGAACTCAAGTGGCAGATCATTTTCAACCACGACTGACTCTACGGGTACCCAACAAGTCACAACAAAGACAAAA
GACGGACAGAACTGTGGTACAATGCTTGAAGTCATAACCTGTAATCAAGAAGGGGAGGGGAAGGTCCGCATTGTT
GCATCGGGATACGTTTGGTTTAACTATGAAGATAGGCGTGCTCCAAAGAATGATCCTGATGGTGATGAACACTAT
AAATATTCCGCACATATTGATGATATCCTCACCCTGGACGAGCGTTCGAGTTGGATGTCGTTCAATGGAGCTGTA
AAGGGTATTTCTAACGGGCACTACAACCAGTTTTGTAACGACGACGTCGTTGACTAG
Transcript >AgabiH97|038230
ATGCCATCTTTTCTTTCTCTCCTCTCTTTGCTTGGACTCTTGTCTACTAGGGGTGTATTTGCTTCGCCATACTAT
TCGATAGACCACGGACTCAACGTGACTATGGTTCAAAGAGCAGATGTCTCTAAATGCGCTGCTCTCAGTATCGAC
GATGCAAAAAAGATGCCTGGTTGGGCCAAATTGGAACGGTATGCAAAGGATAAATGGGGCGATGGCGACTGGAAT
ATCGTCACCAACCCTGAAGATTTCCTAGGCCGTCCAGCTAATGCCTGTGTTGACGATAGCACTTCCAATATCACT
CCCAAAGGTTCTCCTCAGTGCACCAGCCGTGTCCAAAATCTGTCAGGTACCTCAGATGGTACAGATGGTGAACAA
GTAGTCTCAGTTTCCACTGGACAGAGCACCGAAGGCAGTTGGACTGTTTCCCAATCCTCGTCATTCAATATCGGT
ACTTCGTTCACCGTAGACGTTGGTTTTGAAGGACTCTTCGATGCATCTACGTCGATTACAACCTCCACCACGTTC
GAGAACTCAAGTGGCAGATCATTTTCAACCACGACTGACTCTACGGGTACCCAACAAGTCACAACAAAGACAAAA
GACGGACAGAACTGTGGTACAATGCTTGAAGTCATAACCTGTAATCAAGAAGGGGAGGGGAAGGTCCGCATTGTT
GCATCGGGATACGTTTGGTTTAACTATGAAGATAGGCGTGCTCCAAAGAATGATCCTGATGGTGATGAACACTAT
AAATATTCCGCACATATTGATGATATCCTCACCCTGGACGAGCGTTCGAGTTGGATGTCGTTCAATGGAGCTGTA
AAGGGTATTTCTAACGGGCACTACAACCAGTTTTGTAACGACGACGTCGTTGACTAG
Gene >AgabiH97|038230
ATGCCATCTTTTCTTTCTCTCCTCTCTTTGCTTGGACTCTTGTCTACTAGGGGTGTATTTGCTTCGCCATACTAT
TCGATAGACCACGGACTCAACGTGACTATGGTTCAAAGAGCAGATGTCTCTAAATGCGCTGCTCTCAGTATCGAC
GATGCAAAAAAGAGTGTGTAATACTTTCTCTTATTATGAGTATGCAGTATTCTGACCTGAAATTCAGTGCCTGGT
TGGGCCAAATTGGAACGGTATGCAAAGGATAAATGGGGCGATGGCGACTGGAATATCGTCACCAACCCTGAAGAT
GTGAGTCTAAGCTTCAAACATCATTCTCTAAGTCTCGCATTTCTTATATAGGCGGAATAGTTCCTAGGCCGTCCA
GCTAATGCCTGTGTTGACGATAGCACTTCCAATATCACTCCCAAAGGTTGATCCACCTTTGTTTCCCTTTCCCTG
TTGTGACTTACCAATTATGTCTACAGGTTCTCCTCAGTGCACCAGCCGTGTCCAAAATCTGTCAGGTACCTCAGA
TGGTACAGATGGTGAACAAGTAGTCTCAGTTTCCACTGGACAGAGCACCGAAGGCAGTTGGACTGTTTCCCGTAT
GTAACGTCATCCTCACAATGATGAATCTATTTTTACACAAAATAACATTTAGAATCCTCGTCATTCAATATCGGT
ACTTCGTTCACCGTAGACGTTGGTTTTGAAGGACTCTTCGATGCATCTACGTCGATTACAACCTCCACCACGTTC
GAGAACTCAAGTGGCAGATCGTGAGTCACCGACGTTCTGCGCCCTGTCCATAGTATTTAGTTAACCAACTACCTG
ATCAGATTTTCAACCACGACTGACTCTACGGGTACCCAACAAGTCACAACAAAGACAAAAGACGGACAGAACTGT
GGTACAATGGTGGGAACCTAATCAGTTATCTTAAAACTGTATAAGTATCTGACTATATAATGCTCAGCTTGAAGT
CATAACCTGTAATCAAGAAGGGGAGGGGAAGGTCCGCATTGTTGCATCGGGATACGTTTGGTTTAACTATGAAGA
TAGGGTGTGTAGTATTCCCTCCCTGTGAAGCTTTTTGGTCAACTAATCAATTACTTTCTCTCATTAAGCGTGCTC
CAAAGAATGATCCTGATGGTGATGAACACTATAAATGTCCGTTATTTCCCCTCATTATTTTGCCTTTGACTTCAA
GACTCATTTGATACAGATTCCGCACATATTGATGATATCCTCACCCTGGACGAGCGTTCGAGTTGGATGTCGTTC
AATGGAGCTGTAAAGGGTATTTCTAACGGGCACTACAACCAGTTTTGTAACGACGACGTCGTTGACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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