Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|037990
Gene name
Locationscaffold_13:1177314..1178575
Strand-
Gene length (bp)1261
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10340 Say1_Mug180 Steryl acetyl hydrolase 7.8E-18 106 335
PF07859 Abhydrolase_3 alpha/beta hydrolase fold 6.2E-17 110 328
PF20434 BD-FAE BD-FAE 7.1E-08 108 196

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9HDV1|MU180_SCHPO Putative steryl acetyl hydrolase mug81 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug180 PE=1 SV=1 17 357 6.0E-12
sp|P18773|EST_ACILW Esterase OS=Acinetobacter lwoffii GN=est PE=3 SV=2 108 328 2.0E-07
sp|Q9EX73|MLHB_RHOER Monoterpene epsilon-lactone hydrolase OS=Rhodococcus erythropolis GN=mlhB PE=1 SV=1 72 328 8.0E-07
sp|P24484|LIP2_MORS1 Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1 107 207 4.0E-06
sp|O14158|YE76_SCHPO AB hydrolase superfamily protein C4A8.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4A8.06c PE=3 SV=1 105 258 7.0E-06

GO

GO Term Description Terminal node
GO:0016787 hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 27.06 14.81 39.30
Initials Initials knots 33.70 18.88 48.52
Pileal_Stipeal_center Stage I stipe center 44.85 25.95 63.75
Pileal_Stipeal_shell Stage I stipe shell 46.53 27.08 65.98
DIF_stipe_center Stage II stipe center 34.53 19.39 49.68
DIF_stipe_shell Stage II stipe shell 43.67 25.11 62.23
DIF_stipe_skin Stage II stipe skin 45.43 26.10 64.77
DIF_cap_skin Stage II cap skin 39.53 22.59 56.47
DIF_cap_tissue Stage II cap tissue 41.85 24.04 59.67
DIF_gill_tissue Stage II gill tissue 35.88 20.18 51.57
YFB_stipe_center Young fruiting body stipe center 34.69 19.57 49.80
YFB_stipe_shell Young fruiting body stipe shell 37.07 20.93 53.21
YFB_stipe_skin Young fruiting body stipe skin 41.27 23.66 58.87
YFB_cap_skin Young fruiting body cap skin 48.45 28.20 68.70
YFB_cap_tissue Young fruiting body cap tissue 42.27 24.29 60.26
YFB_gill_tissue Young fruiting body gill tissue 45.22 26.03 64.41
YFB_veil Young fruiting body veil 47.40 27.55 67.26

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.450808 no
Casing YFB_stipe_center 0.524822 no
Casing YFB_stipe_shell 0.378468 no
Casing YFB_stipe_skin 0.180446 no
Casing YFB_cap_skin 0.038278 yes
Casing YFB_cap_tissue 0.146718 no
Casing YFB_gill_tissue 0.082277 no
Casing YFB_veil 0.046952 yes
Casing Initials 0.590773 no
Casing Pileal_Stipeal_center 0.089805 no
Casing Pileal_Stipeal_shell 0.058926 no
Casing DIF_stipe_center 0.534262 no
Casing DIF_stipe_shell 0.114428 no
Casing DIF_stipe_skin 0.080883 no
Casing DIF_cap_skin 0.243209 no
Casing DIF_cap_tissue 0.159049 no
DIF_gill_tissue YFB_stipe_center 0.954987 no
DIF_gill_tissue YFB_stipe_shell 0.956320 no
DIF_gill_tissue YFB_stipe_skin 0.762880 no
DIF_gill_tissue YFB_cap_skin 0.383070 no
DIF_gill_tissue YFB_cap_tissue 0.709513 no
DIF_gill_tissue YFB_gill_tissue 0.550591 no
DIF_gill_tissue YFB_veil 0.429326 no
YFB_stipe_center YFB_stipe_shell 0.906222 no
YFB_stipe_center YFB_stipe_skin 0.692242 no
YFB_stipe_center YFB_cap_skin 0.315510 no
YFB_stipe_center YFB_cap_tissue 0.633733 no
YFB_stipe_center YFB_gill_tissue 0.473262 no
YFB_stipe_center YFB_veil 0.358658 no
YFB_stipe_shell YFB_stipe_skin 0.832632 no
YFB_stipe_shell YFB_cap_skin 0.454761 no
YFB_stipe_shell YFB_cap_tissue 0.782370 no
YFB_stipe_shell YFB_gill_tissue 0.629077 no
YFB_stipe_shell YFB_veil 0.505238 no
YFB_stipe_skin YFB_cap_skin 0.710074 no
YFB_stipe_skin YFB_cap_tissue 0.967995 no
YFB_stipe_skin YFB_gill_tissue 0.859949 no
YFB_stipe_skin YFB_veil 0.756372 no
YFB_cap_skin YFB_cap_tissue 0.764070 no
YFB_cap_skin YFB_gill_tissue 0.895581 no
YFB_cap_skin YFB_veil 0.969096 no
YFB_cap_tissue YFB_gill_tissue 0.899599 no
YFB_cap_tissue YFB_veil 0.805243 no
YFB_gill_tissue YFB_veil 0.931310 no
Initials DIF_gill_tissue 0.911464 no
Initials YFB_stipe_center 0.961749 no
Initials YFB_stipe_shell 0.856474 no
Initials YFB_stipe_skin 0.621873 no
Initials YFB_cap_skin 0.257674 no
Initials YFB_cap_tissue 0.559724 no
Initials YFB_gill_tissue 0.400386 no
Initials YFB_veil 0.297484 no
Initials Pileal_Stipeal_center 0.423761 no
Initials Pileal_Stipeal_shell 0.333804 no
Initials DIF_stipe_center 0.967456 no
Initials DIF_stipe_shell 0.480337 no
Initials DIF_stipe_skin 0.391794 no
Initials DIF_cap_skin 0.718377 no
Initials DIF_cap_tissue 0.584441 no
Pileal_Stipeal_center DIF_gill_tissue 0.572813 no
Pileal_Stipeal_center YFB_stipe_center 0.496016 no
Pileal_Stipeal_center YFB_stipe_shell 0.650805 no
Pileal_Stipeal_center YFB_stipe_skin 0.875809 no
Pileal_Stipeal_center YFB_cap_skin 0.881536 no
Pileal_Stipeal_center YFB_cap_tissue 0.916182 no
Pileal_Stipeal_center YFB_gill_tissue 0.988198 no
Pileal_Stipeal_center YFB_veil 0.917746 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.948609 no
Pileal_Stipeal_center DIF_stipe_center 0.484655 no
Pileal_Stipeal_center DIF_stipe_shell 0.963352 no
Pileal_Stipeal_center DIF_stipe_skin 0.982285 no
Pileal_Stipeal_center DIF_cap_skin 0.790423 no
Pileal_Stipeal_center DIF_cap_tissue 0.896801 no
Pileal_Stipeal_shell DIF_gill_tissue 0.477715 no
Pileal_Stipeal_shell YFB_stipe_center 0.401322 no
Pileal_Stipeal_shell YFB_stipe_shell 0.553847 no
Pileal_Stipeal_shell YFB_stipe_skin 0.799689 no
Pileal_Stipeal_shell YFB_cap_skin 0.942888 no
Pileal_Stipeal_shell YFB_cap_tissue 0.847361 no
Pileal_Stipeal_shell YFB_gill_tissue 0.960847 no
Pileal_Stipeal_shell YFB_veil 0.974631 no
Pileal_Stipeal_shell DIF_stipe_center 0.388871 no
Pileal_Stipeal_shell DIF_stipe_shell 0.905355 no
Pileal_Stipeal_shell DIF_stipe_skin 0.967690 no
Pileal_Stipeal_shell DIF_cap_skin 0.699443 no
Pileal_Stipeal_shell DIF_cap_tissue 0.825803 no
DIF_stipe_center DIF_gill_tissue 0.948073 no
DIF_stipe_center YFB_stipe_center 0.993849 no
DIF_stipe_center YFB_stipe_shell 0.898224 no
DIF_stipe_center YFB_stipe_skin 0.684007 no
DIF_stipe_center YFB_cap_skin 0.306061 no
DIF_stipe_center YFB_cap_tissue 0.625002 no
DIF_stipe_center YFB_gill_tissue 0.465962 no
DIF_stipe_center YFB_veil 0.349649 no
DIF_stipe_center DIF_stipe_shell 0.548492 no
DIF_stipe_center DIF_stipe_skin 0.454633 no
DIF_stipe_center DIF_cap_skin 0.774038 no
DIF_stipe_center DIF_cap_tissue 0.648446 no
DIF_stipe_shell DIF_gill_tissue 0.630037 no
DIF_stipe_shell YFB_stipe_center 0.554020 no
DIF_stipe_shell YFB_stipe_shell 0.710027 no
DIF_stipe_shell YFB_stipe_skin 0.919907 no
DIF_stipe_shell YFB_cap_skin 0.829521 no
DIF_stipe_shell YFB_cap_tissue 0.956184 no
DIF_stipe_shell YFB_gill_tissue 0.951836 no
DIF_stipe_shell YFB_veil 0.871363 no
DIF_stipe_shell DIF_stipe_skin 0.944974 no
DIF_stipe_shell DIF_cap_skin 0.841253 no
DIF_stipe_shell DIF_cap_tissue 0.940125 no
DIF_stipe_skin DIF_gill_tissue 0.542681 no
DIF_stipe_skin YFB_stipe_center 0.468413 no
DIF_stipe_skin YFB_stipe_shell 0.622473 no
DIF_stipe_skin YFB_stipe_skin 0.852906 no
DIF_stipe_skin YFB_cap_skin 0.905932 no
DIF_stipe_skin YFB_cap_tissue 0.895878 no
DIF_stipe_skin YFB_gill_tissue 0.993056 no
DIF_stipe_skin YFB_veil 0.940572 no
DIF_stipe_skin DIF_cap_skin 0.762687 no
DIF_stipe_skin DIF_cap_tissue 0.874887 no
DIF_cap_skin DIF_gill_tissue 0.845446 no
DIF_cap_skin YFB_stipe_center 0.779935 no
DIF_cap_skin YFB_stipe_shell 0.906109 no
DIF_cap_skin YFB_stipe_skin 0.941212 no
DIF_cap_skin YFB_cap_skin 0.602045 no
DIF_cap_skin YFB_cap_tissue 0.901612 no
DIF_cap_skin YFB_gill_tissue 0.768641 no
DIF_cap_skin YFB_veil 0.652059 no
DIF_cap_skin DIF_cap_tissue 0.915831 no
DIF_cap_tissue DIF_gill_tissue 0.729156 no
DIF_cap_tissue YFB_stipe_center 0.658878 no
DIF_cap_tissue YFB_stipe_shell 0.800920 no
DIF_cap_tissue YFB_stipe_skin 0.981597 no
DIF_cap_tissue YFB_cap_skin 0.740638 no
DIF_cap_tissue YFB_cap_tissue 0.986136 no
DIF_cap_tissue YFB_gill_tissue 0.882729 no
DIF_cap_tissue YFB_veil 0.783070 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|037990
MTSREKQYGRPSFFERLSIFFQLLRLPTILVWTFIFKWNGRTRKRSVLDTYIRFSFNNFNIRQIQYLSGTTRGNY
NAWCHKLGKQEPHVEAIGENANLLWLGERRLEKVILCFHGGAFTVPAVEGHMKYLTHIRTRLGERGVNVSVALLE
YTLIPVAAFPTQLKQGVTAIKHLLSLGVEPQNIQLVGESAGANLILQVLAHILHPLDNENVPPLSLPSPLKGACL
VSPWVDLSDIHGTLKSGDSTDILTTNSIQYLGAEVLKSVPKEYLGYVEANSAKDDWWKGADMLVDRVLITAGREE
CLNNEIIRFKSVFETFHSQVLLQEHQGVHSDPVMAMGIGESGGGAPDMIIDWFRAGF*
Coding >AgabiH97|037990
ATGACCTCCCGAGAAAAACAGTACGGTCGTCCCTCCTTTTTCGAAAGGCTCTCGATATTCTTCCAACTTCTTCGA
TTGCCTACTATCTTAGTTTGGACTTTTATCTTCAAATGGAATGGTAGGACTAGAAAACGGAGCGTTCTTGATACC
TATATTCGATTCTCATTCAACAACTTCAATATCCGTCAAATTCAATACCTTTCTGGAACAACCAGAGGGAACTAC
AATGCCTGGTGTCATAAGCTGGGTAAGCAAGAACCCCATGTCGAGGCAATCGGCGAAAATGCAAATCTACTTTGG
CTGGGTGAGCGGAGACTGGAGAAGGTTATCTTGTGTTTTCATGGGGGGGCTTTCACCGTGCCTGCTGTTGAAGGA
CATATGAAGTACTTGACCCACATTCGTACCAGACTGGGAGAACGCGGCGTTAATGTGTCCGTAGCTCTGCTTGAG
TACACTCTCATCCCAGTAGCTGCTTTCCCCACTCAACTCAAACAGGGGGTGACTGCCATCAAGCACCTCTTGAGC
CTCGGTGTTGAACCACAGAACATTCAATTGGTGGGCGAGTCTGCTGGTGCAAACTTGATACTACAAGTTCTTGCC
CATATCTTGCACCCTCTCGACAACGAAAATGTACCGCCTTTATCCCTTCCTTCTCCTCTTAAAGGTGCCTGCCTG
GTATCCCCTTGGGTGGATCTCTCGGATATACATGGAACGCTCAAGAGCGGTGATTCCACTGATATCCTTACTACC
AACTCGATCCAGTATTTGGGTGCAGAGGTCCTCAAATCAGTGCCAAAGGAGTATCTCGGTTACGTTGAGGCAAAT
AGTGCAAAGGATGATTGGTGGAAGGGCGCGGACATGCTCGTTGACCGTGTTCTTATTACGGCTGGTCGGGAAGAG
TGTCTCAATAATGAAATTATTCGTTTCAAATCCGTATTTGAAACTTTCCATTCTCAAGTCCTTTTGCAAGAACAT
CAAGGTGTACATTCAGACCCCGTCATGGCCATGGGTATTGGAGAATCAGGTGGGGGTGCACCAGATATGATCATT
GACTGGTTTCGAGCCGGTTTTTAA
Transcript >AgabiH97|037990
ATGACCTCCCGAGAAAAACAGTACGGTCGTCCCTCCTTTTTCGAAAGGCTCTCGATATTCTTCCAACTTCTTCGA
TTGCCTACTATCTTAGTTTGGACTTTTATCTTCAAATGGAATGGTAGGACTAGAAAACGGAGCGTTCTTGATACC
TATATTCGATTCTCATTCAACAACTTCAATATCCGTCAAATTCAATACCTTTCTGGAACAACCAGAGGGAACTAC
AATGCCTGGTGTCATAAGCTGGGTAAGCAAGAACCCCATGTCGAGGCAATCGGCGAAAATGCAAATCTACTTTGG
CTGGGTGAGCGGAGACTGGAGAAGGTTATCTTGTGTTTTCATGGGGGGGCTTTCACCGTGCCTGCTGTTGAAGGA
CATATGAAGTACTTGACCCACATTCGTACCAGACTGGGAGAACGCGGCGTTAATGTGTCCGTAGCTCTGCTTGAG
TACACTCTCATCCCAGTAGCTGCTTTCCCCACTCAACTCAAACAGGGGGTGACTGCCATCAAGCACCTCTTGAGC
CTCGGTGTTGAACCACAGAACATTCAATTGGTGGGCGAGTCTGCTGGTGCAAACTTGATACTACAAGTTCTTGCC
CATATCTTGCACCCTCTCGACAACGAAAATGTACCGCCTTTATCCCTTCCTTCTCCTCTTAAAGGTGCCTGCCTG
GTATCCCCTTGGGTGGATCTCTCGGATATACATGGAACGCTCAAGAGCGGTGATTCCACTGATATCCTTACTACC
AACTCGATCCAGTATTTGGGTGCAGAGGTCCTCAAATCAGTGCCAAAGGAGTATCTCGGTTACGTTGAGGCAAAT
AGTGCAAAGGATGATTGGTGGAAGGGCGCGGACATGCTCGTTGACCGTGTTCTTATTACGGCTGGTCGGGAAGAG
TGTCTCAATAATGAAATTATTCGTTTCAAATCCGTATTTGAAACTTTCCATTCTCAAGTCCTTTTGCAAGAACAT
CAAGGTGTACATTCAGACCCCGTCATGGCCATGGGTATTGGAGAATCAGGTGGGGGTGCACCAGATATGATCATT
GACTGGTTTCGAGCCGGTTTTTAA
Gene >AgabiH97|037990
ATGACCTCCCGAGAAAAACAGTACGGTCGTCCCTCCTTTTTCGAAAGGCTCTCGATATTCTTCCAACTTCTTCGA
TTGCGTCAGTACTCACAACAACAATATATGTATCCGAAGCTGATTTCATTCATCCCATGTAGCTACTATCTTAGT
TTGGACTTTTATCTTCAAATGGAATGGTAGGACTAGAAAACGGAGCGTTCTTGATACCTATATTCGATTCTCATT
CAACAACTTCAATATCCGTCAAATTCAATACCTTTCTGGAACAACCAGAGGGAACTACAATGCCTGGTGTCATAA
GCTGGGTAAGCAAGAACCCCATGTCGAGGCAATCGGCGAAAATGCAAATCTACTTTGGCTGGGTGAGCGGAGACT
GGAGAAGGTTATCTTGTGTTTTCATGGTGCGTATCTTAGATGCGTTATTCATATGTCGTTGGTGCCTTTACTGAA
TGTGCATTATAAAATAGGGGGGGCTTTCACCGTGCCTGCTGTTGAAGGACATATGAAGTACTTGACCCACATTCG
TACCAGACTGGGAGAACGCGGCGTTAATGTGTCCGTAGCTCTGCTTGAGTACAGTGAGCATCTGGTTACGCCACA
CCCGCCACGCACAGGCCGCTAATCGACCTTCTTTCCCGTAGCTCTCATCCCAGTAGCTGCTTTCCCCACTCAACT
CAAACAGGGGGTGACTGCCATCAAGCACCTCTTGAGCCTCGGTGTTGAACCACAGAACATTCAATTGGTGGGCGA
GTCTGCTGGTGCAAACTTGATACTACAAGTTCTTGCCCATATCTTGCACCCTCTCGACAACGAAAATGTACCGCC
TTTATCCCTTCCTTCTCCTCTTAAAGGTGCCTGCCTGGTATCCCCTTGGGTGGATCTCTCGGATATACATGGAAC
GCTCAAGAGCGGTGATTCCACTGATATCCTTACTACCAACTCGATCCAGTATTTGGGTGCAGAGGTCCTCAAATC
AGTGCCAAAGGAGTATCTCGGTTACGTTGAGGCAAATAGTGCAAAGGATGATTGGTGGAAGGGCGCGGACATGCT
CGTTGACCGTGTTCTTATTACGGCTGGTCGGGAAGAGTGTCTCAATAATGAAATTATTCGTTTCAAATCCGTATT
TGAAACTTTCCATTCTCAAGTCCTTTTGCAAGAACATCAAGGTGTACATTCAGACCCCGTCATGGCCATGGGTAT
TGGAGAATCAGGTGGGGGTGCACCAGATATGATCATTGACTGGTTTCGAGCCGGTTTTTAA

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