© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|037690 |
| Gene name | |
| Location | scaffold_13:1075899..1078641 |
| Strand | - |
| Gene length (bp) | 2742 |
| Transcript length (bp) | 2244 |
| Coding sequence length (bp) | 2244 |
| Protein length (aa) | 748 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01602 | Adaptin_N | Adaptin N terminal region | 1.2E-139 | 10 | 535 |
| PF12717 | Cnd1 | non-SMC mitotic condensation complex subunit 1 | 5.0E-60 | 97 | 268 |
| PF13646 | HEAT_2 | HEAT repeats | 1.6E-07 | 86 | 180 |
| PF02985 | HEAT | HEAT repeat | 5.4E-04 | 119 | 145 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9SUS3|APBLB_ARATH | Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD PE=1 SV=1 | 7 | 602 | 0.0E+00 |
| sp|O81742|APBLC_ARATH | Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD PE=1 SV=2 | 7 | 596 | 0.0E+00 |
| sp|O43079|AP1B1_SCHPO | AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apl2 PE=1 SV=1 | 3 | 658 | 0.0E+00 |
| sp|Q54X82|AP1B_DICDI | AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1 | 7 | 587 | 0.0E+00 |
| sp|P52303|AP1B1_RAT | AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1 | 7 | 589 | 0.0E+00 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9SUS3|APBLB_ARATH | Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD PE=1 SV=1 | 7 | 602 | 0.0E+00 |
| sp|O81742|APBLC_ARATH | Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD PE=1 SV=2 | 7 | 596 | 0.0E+00 |
| sp|O43079|AP1B1_SCHPO | AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apl2 PE=1 SV=1 | 3 | 658 | 0.0E+00 |
| sp|Q54X82|AP1B_DICDI | AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1 | 7 | 587 | 0.0E+00 |
| sp|P52303|AP1B1_RAT | AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1 | 7 | 589 | 0.0E+00 |
| sp|P63010|AP2B1_HUMAN | AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1 | 7 | 598 | 0.0E+00 |
| sp|P62944|AP2B1_RAT | AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1 | 7 | 598 | 0.0E+00 |
| sp|Q08DS7|AP1B1_BOVIN | AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1 | 7 | 598 | 0.0E+00 |
| sp|P63009|AP2B1_BOVIN | AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2 | 7 | 598 | 0.0E+00 |
| sp|Q10567|AP1B1_HUMAN | AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2 | 7 | 589 | 0.0E+00 |
| sp|O35643|AP1B1_MOUSE | AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2 | 7 | 589 | 0.0E+00 |
| sp|Q9DBG3|AP2B1_MOUSE | AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1 | 7 | 598 | 0.0E+00 |
| sp|O43005|AP2B_SCHPO | AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apl1 PE=3 SV=1 | 24 | 591 | 1.0E-158 |
| sp|P36000|AP1B1_YEAST | AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APL2 PE=1 SV=1 | 8 | 637 | 9.0E-154 |
| sp|Q9LDK9|APBLA_ARATH | Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD PE=1 SV=1 | 24 | 591 | 7.0E-96 |
| sp|Q9WV76|AP4B1_MOUSE | AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=1 SV=2 | 23 | 587 | 2.0E-83 |
| sp|Q9Y6B7|AP4B1_HUMAN | AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2 | 23 | 548 | 4.0E-79 |
| sp|Q54R84|AP4B_DICDI | AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3 SV=1 | 14 | 589 | 2.0E-73 |
| sp|P27351|AP2B_YEAST | AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APL1 PE=1 SV=2 | 25 | 581 | 1.0E-71 |
| sp|Q13367|AP3B2_HUMAN | AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2 | 11 | 549 | 5.0E-66 |
| sp|Q9JME5|AP3B2_MOUSE | AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2 | 11 | 549 | 1.0E-65 |
| sp|Q7YRF1|AP3B1_CANLF | AP-3 complex subunit beta-1 OS=Canis lupus familiaris GN=AP3B1 PE=2 SV=1 | 10 | 549 | 4.0E-62 |
| sp|Q32PG1|AP3B1_BOVIN | AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1 | 10 | 549 | 1.0E-61 |
| sp|O00203|AP3B1_HUMAN | AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3 | 10 | 549 | 3.0E-61 |
| sp|Q9Z1T1|AP3B1_MOUSE | AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2 | 10 | 549 | 4.0E-61 |
| sp|O13939|AP3B_SCHPO | AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=apl6 PE=1 SV=1 | 18 | 535 | 7.0E-39 |
| sp|Q556J8|AP3B_DICDI | AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1 PE=3 SV=1 | 13 | 233 | 7.0E-26 |
| sp|Q556J8|AP3B_DICDI | AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1 PE=3 SV=1 | 285 | 497 | 2.0E-25 |
| sp|Q759E2|AP3B_ASHGO | AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2 | 2 | 174 | 2.0E-18 |
| sp|Q9M2T1|AP3BA_ARATH | AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2 SV=2 | 256 | 534 | 2.0E-17 |
| sp|P46682|AP3B_YEAST | AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APL6 PE=1 SV=2 | 18 | 184 | 5.0E-16 |
| sp|Q5R5M2|AP1G1_PONAB | AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1 | 49 | 460 | 2.0E-09 |
| sp|Q0WW26|COPG_ARATH | Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2 | 42 | 536 | 2.0E-09 |
| sp|P41810|COPB_YEAST | Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC26 PE=1 SV=2 | 24 | 459 | 2.0E-09 |
| sp|Q6Z382|COPG2_ORYSJ | Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica GN=Os07g0201100 PE=2 SV=1 | 42 | 533 | 4.0E-09 |
| sp|O43747|AP1G1_HUMAN | AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5 | 49 | 460 | 7.0E-09 |
| sp|P87140|COPG_SCHPO | Probable coatomer subunit gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec21 PE=1 SV=1 | 208 | 554 | 7.0E-09 |
| sp|P22892|AP1G1_MOUSE | AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3 | 49 | 460 | 7.0E-09 |
| sp|Q8I8U2|AP1G_DICDI | AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1 PE=1 SV=1 | 49 | 515 | 2.0E-08 |
| sp|Q99128|AP1G1_USTMA | AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=APL4 PE=3 SV=3 | 49 | 183 | 4.0E-08 |
| sp|Q8H852|COPG1_ORYSJ | Coatomer subunit gamma-1 OS=Oryza sativa subsp. japonica GN=Os03g0227000 PE=2 SV=2 | 42 | 533 | 1.0E-07 |
| sp|Q80V94|AP4E1_MOUSE | AP-4 complex subunit epsilon-1 OS=Mus musculus GN=Ap4e1 PE=1 SV=3 | 27 | 364 | 3.0E-07 |
| sp|Q9UPM8|AP4E1_HUMAN | AP-4 complex subunit epsilon-1 OS=Homo sapiens GN=AP4E1 PE=1 SV=2 | 27 | 373 | 2.0E-06 |
| sp|Q9U4N3|COPB_TOXGO | Coatomer subunit beta OS=Toxoplasma gondii PE=2 SV=2 | 13 | 141 | 5.0E-06 |
| sp|Q54HL0|COPG_DICDI | Coatomer subunit gamma OS=Dictyostelium discoideum GN=copG PE=1 SV=1 | 42 | 551 | 6.0E-06 |
| sp|Q22498|COPG_CAEEL | Probable coatomer subunit gamma OS=Caenorhabditis elegans GN=T14G10.5 PE=3 SV=1 | 47 | 534 | 6.0E-06 |
| sp|Q9UUF7|COPB_SCHPO | Coatomer subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec26 PE=3 SV=1 | 29 | 177 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006886 | intracellular protein transport | Yes |
| GO:0016192 | vesicle-mediated transport | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0030117 | membrane coat | Yes |
| GO:0015031 | protein transport | No |
| GO:0051179 | localization | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0005488 | binding | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0008150 | biological_process | No |
| GO:0098796 | membrane protein complex | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0051641 | cellular localization | No |
| GO:0006810 | transport | No |
| GO:0008104 | protein localization | No |
| GO:0071702 | organic substance transport | No |
| GO:0003674 | molecular_function | No |
| GO:0033036 | macromolecule localization | No |
| GO:0046907 | intracellular transport | No |
| GO:0032991 | protein-containing complex | No |
| GO:0009987 | cellular process | No |
| GO:0051649 | establishment of localization in cell | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 108.99 | 63.34 | 154.65 |
| Initials | Initials knots | 68.99 | 41.14 | 96.84 |
| Pileal_Stipeal_center | Stage I stipe center | 70.38 | 41.96 | 98.80 |
| Pileal_Stipeal_shell | Stage I stipe shell | 61.03 | 36.58 | 85.48 |
| DIF_stipe_center | Stage II stipe center | 95.98 | 56.33 | 135.64 |
| DIF_stipe_shell | Stage II stipe shell | 114.51 | 66.39 | 162.62 |
| DIF_stipe_skin | Stage II stipe skin | 75.08 | 44.68 | 105.48 |
| DIF_cap_skin | Stage II cap skin | 77.65 | 46.13 | 109.17 |
| DIF_cap_tissue | Stage II cap tissue | 83.14 | 49.02 | 117.25 |
| DIF_gill_tissue | Stage II gill tissue | 71.13 | 42.36 | 99.91 |
| YFB_stipe_center | Young fruiting body stipe center | 94.44 | 54.23 | 134.66 |
| YFB_stipe_shell | Young fruiting body stipe shell | 141.23 | 80.42 | 202.04 |
| YFB_stipe_skin | Young fruiting body stipe skin | 74.23 | 44.24 | 104.22 |
| YFB_cap_skin | Young fruiting body cap skin | 87.37 | 51.48 | 123.25 |
| YFB_cap_tissue | Young fruiting body cap tissue | 120.63 | 68.08 | 173.18 |
| YFB_gill_tissue | Young fruiting body gill tissue | 70.60 | 41.72 | 99.47 |
| YFB_veil | Young fruiting body veil | 76.86 | 45.73 | 107.98 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.146187 | no |
| Casing | YFB_stipe_center | 0.754661 | no |
| Casing | YFB_stipe_shell | 0.475697 | no |
| Casing | YFB_stipe_skin | 0.209726 | no |
| Casing | YFB_cap_skin | 0.559990 | no |
| Casing | YFB_cap_tissue | 0.839167 | no |
| Casing | YFB_gill_tissue | 0.140982 | no |
| Casing | YFB_veil | 0.268771 | no |
| Casing | Initials | 0.117779 | no |
| Casing | Pileal_Stipeal_center | 0.137864 | no |
| Casing | Pileal_Stipeal_shell | 0.031557 | yes |
| Casing | DIF_stipe_center | 0.780752 | no |
| Casing | DIF_stipe_shell | 0.927307 | no |
| Casing | DIF_stipe_skin | 0.225814 | no |
| Casing | DIF_cap_skin | 0.286409 | no |
| Casing | DIF_cap_tissue | 0.438790 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.412746 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.008791 | yes |
| DIF_gill_tissue | YFB_stipe_skin | 0.934914 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.586609 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.057747 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.988547 | no |
| DIF_gill_tissue | YFB_veil | 0.873878 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.205767 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.511613 | no |
| YFB_stipe_center | YFB_cap_skin | 0.881373 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.521019 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.394578 | no |
| YFB_stipe_center | YFB_veil | 0.594393 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.020523 | yes |
| YFB_stipe_shell | YFB_cap_skin | 0.100894 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.719740 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.009446 | yes |
| YFB_stipe_shell | YFB_veil | 0.027451 | yes |
| YFB_stipe_skin | YFB_cap_skin | 0.690385 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.090658 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.925532 | no |
| YFB_stipe_skin | YFB_veil | 0.949210 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.327476 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.566940 | no |
| YFB_cap_skin | YFB_veil | 0.772228 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.051115 | no |
| YFB_cap_tissue | YFB_veil | 0.124995 | no |
| YFB_gill_tissue | YFB_veil | 0.861358 | no |
| Initials | DIF_gill_tissue | 0.955815 | no |
| Initials | YFB_stipe_center | 0.344928 | no |
| Initials | YFB_stipe_shell | 0.006742 | yes |
| Initials | YFB_stipe_skin | 0.881955 | no |
| Initials | YFB_cap_skin | 0.513100 | no |
| Initials | YFB_cap_tissue | 0.041824 | yes |
| Initials | YFB_gill_tissue | 0.966397 | no |
| Initials | YFB_veil | 0.815842 | no |
| Initials | Pileal_Stipeal_center | 0.970338 | no |
| Initials | Pileal_Stipeal_shell | 0.779565 | no |
| Initials | DIF_stipe_center | 0.293674 | no |
| Initials | DIF_stipe_shell | 0.072862 | no |
| Initials | DIF_stipe_skin | 0.858863 | no |
| Initials | DIF_cap_skin | 0.794189 | no |
| Initials | DIF_cap_tissue | 0.632917 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.985341 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.390088 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.006387 | yes |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.919816 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.562185 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.049046 | yes |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.995531 | no |
| Pileal_Stipeal_center | YFB_veil | 0.856998 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.733997 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.332363 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.084700 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.899301 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.838944 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.683664 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.698046 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.132420 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.000613 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.591259 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.233970 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.007782 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.719824 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.501761 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.103472 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.015529 | yes |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.560154 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.479596 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.324600 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.357627 | no |
| DIF_stipe_center | YFB_stipe_center | 0.978489 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.210195 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.454978 | no |
| DIF_stipe_center | YFB_cap_skin | 0.844801 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.539190 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.337956 | no |
| DIF_stipe_center | YFB_veil | 0.537814 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.662825 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.479870 | no |
| DIF_stipe_center | DIF_cap_skin | 0.564208 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.738454 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.101215 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.638186 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.591094 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.146995 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.440174 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.923112 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.095314 | no |
| DIF_stipe_shell | YFB_veil | 0.185218 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.154113 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.199979 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.329497 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.917728 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.536942 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.020260 | yes |
| DIF_stipe_skin | YFB_stipe_skin | 0.982263 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.715000 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.099929 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.903365 | no |
| DIF_stipe_skin | YFB_veil | 0.964697 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.950369 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.824078 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.853129 | no |
| DIF_cap_skin | YFB_stipe_center | 0.620893 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.027943 | yes |
| DIF_cap_skin | YFB_stipe_skin | 0.931434 | no |
| DIF_cap_skin | YFB_cap_skin | 0.792928 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.134571 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.840367 | no |
| DIF_cap_skin | YFB_veil | 0.984531 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.891878 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.703049 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.781001 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.061277 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.800638 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.925532 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.234076 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.689158 | no |
| DIF_cap_tissue | YFB_veil | 0.874658 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|037690 MSIRGPRKGENYELSVDLNSEYRDKRKDAIKRVIASMTVGKDVSGLFPDVLKNMQTEDLEQKKLVYLYLMNYAKT QPELVILAVNTFVKDADDSNPLVRALAIRTMGCLRAEKIIDYLCDPLQKSLRDENPYVRKTAALCVAKLYDLKPD LVIENGFLTQLHEMIADSNPMVVANTVAALTDIHNSATSNPATQADASAIFNITGSILNKLLIALNECSEWGRVA VLNALARYVAQDEKESEHICERVVPQFQHINGSVVLAAVKVIMIHMRHVTREDLIKQLVKKMAPPLVTLLSSPPE VQWVALRNINLLLQKRSDILSNEMRVFFCKYNDPLYVKVEKLDIMVRLASDNNVDALLSELKEYASEVDVDFVRK SIKAIGQTAIKIESGAERCVNVLLELIATRVSYVVQEAVVVMKDIFRRYPSTYEGVIPTLCANLDELEEPEAKAS LIWIIGEYANKINNADSLLGFFVDSFTEESYSVQLQTLTAVVKLFLKKPDTSQGLVQRILDTATKECDSPDVRDR AYIYWRLLSTDPGAAKAVVWADKPPISIPRTTVAPALLEELLGEIPTLASVYHKPAETFIGKGRVGVDSVQRKAG ADDDRLAAHKALQTVAAGRQAENLLDFDDDDISTTNGQPSGLAATEVLSQTPAAANLLSGTSSNPLDDLVSIFGT NGTGGGGGGFGAASGLAPSATNNNHAPDPLAGLGGLSISGGCSLMSPDQTSPQQPKSATSPQQQQEDLLGLF* |
| Coding | >AgabiH97|037690 ATGAGCATTCGAGGTCCCCGCAAAGGCGAAAACTACGAGCTCAGCGTCGACCTCAACAGTGAATACCGCGATAAA CGAAAGGATGCAATTAAGCGCGTCATCGCCTCTATGACCGTTGGCAAGGATGTCAGCGGTCTATTCCCTGACGTT CTCAAGAACATGCAGACTGAAGACTTGGAGCAGAAGAAACTTGTATATCTGTACCTAATGAACTACGCAAAGACT CAGCCCGAACTCGTCATCCTCGCCGTCAACACTTTCGTCAAGGACGCCGACGATTCAAATCCTCTCGTTCGTGCC CTTGCCATCAGGACCATGGGCTGTCTCAGAGCAGAGAAGATTATCGATTACCTCTGCGATCCTTTGCAAAAAAGC CTGCGGGACGAGAATCCCTATGTCAGGAAGACCGCAGCACTCTGCGTAGCAAAACTGTACGACCTGAAACCAGAC TTGGTCATCGAAAATGGCTTCTTGACGCAATTGCATGAGATGATAGCTGATTCGAACCCGATGGTAGTCGCTAAC ACGGTCGCGGCTCTCACAGATATCCACAATTCTGCCACATCTAATCCCGCAACGCAAGCCGATGCTTCTGCCATT TTCAACATCACGGGTTCGATCCTCAACAAGCTTCTGATTGCGCTCAACGAATGTTCAGAATGGGGTCGTGTTGCC GTTTTGAACGCCCTTGCCCGATACGTAGCTCAGGACGAAAAGGAATCAGAGCATATCTGTGAACGTGTCGTACCA CAGTTTCAGCATATCAATGGGAGTGTGGTGCTCGCAGCAGTCAAGGTCATTATGATTCATATGCGTCACGTAACA AGAGAAGACCTCATCAAGCAACTCGTGAAGAAGATGGCGCCCCCACTAGTCACTCTACTCTCGTCACCTCCCGAA GTACAATGGGTGGCCCTCCGAAACATCAACCTCTTACTTCAGAAGCGATCCGATATCTTGTCAAACGAGATGAGA GTCTTTTTCTGCAAGTATAACGATCCGTTGTATGTCAAGGTGGAGAAACTGGATATCATGGTCCGTTTAGCTTCG GACAATAACGTAGATGCACTATTGAGCGAGTTGAAAGAGTACGCTTCCGAGGTGGATGTTGATTTCGTGCGGAAG AGTATCAAAGCTATCGGTCAGACGGCGATCAAGATCGAGTCTGGAGCTGAACGTTGCGTCAACGTTCTTCTCGAA CTCATTGCTACGAGAGTCAGCTACGTGGTTCAAGAAGCTGTCGTTGTCATGAAAGACATATTCCGCCGGTATCCA TCTACTTATGAAGGTGTTATCCCCACTCTGTGTGCCAACTTGGATGAACTAGAAGAACCAGAGGCTAAAGCATCC CTTATCTGGATTATTGGAGAGTATGCGAACAAGATCAACAATGCGGATTCTTTACTCGGGTTCTTTGTAGATAGC TTTACGGAGGAGTCGTACTCAGTTCAACTACAAACCCTCACCGCTGTTGTCAAACTTTTCCTCAAGAAACCCGAC ACATCACAAGGACTAGTGCAACGAATATTAGACACTGCCACTAAGGAATGCGACTCTCCAGATGTAAGAGACAGG GCATACATTTATTGGAGATTGCTTTCCACGGATCCTGGCGCTGCAAAGGCAGTAGTGTGGGCCGATAAACCTCCC ATCTCGATACCACGGACGACTGTCGCTCCAGCGTTGTTGGAGGAATTGTTGGGAGAGATACCGACACTTGCGAGT GTTTATCACAAACCTGCGGAAACGTTCATTGGGAAAGGAAGGGTTGGTGTTGACTCTGTTCAAAGAAAAGCAGGA GCGGATGATGATCGGCTTGCCGCGCACAAAGCGTTACAGACGGTCGCTGCAGGAAGACAAGCGGAGAACCTCCTT GATTTCGATGACGATGATATATCAACAACAAACGGCCAACCTTCAGGCCTTGCAGCAACAGAGGTTCTCTCACAA ACGCCAGCTGCTGCTAATCTTCTTTCCGGAACGTCGAGTAATCCGTTAGACGATCTCGTATCCATCTTTGGTACA AATGGTACTGGGGGTGGTGGCGGTGGATTTGGCGCGGCGTCTGGTTTAGCTCCGTCGGCCACTAATAATAACCAT GCGCCGGATCCGCTTGCTGGTTTGGGCGGGTTGTCGATCTCGGGTGGCTGTTCGTTAATGTCGCCTGATCAAACG TCACCGCAGCAACCGAAATCTGCGACGTCGCCGCAACAGCAACAAGAGGATTTGTTGGGATTGTTTTAG |
| Transcript | >AgabiH97|037690 ATGAGCATTCGAGGTCCCCGCAAAGGCGAAAACTACGAGCTCAGCGTCGACCTCAACAGTGAATACCGCGATAAA CGAAAGGATGCAATTAAGCGCGTCATCGCCTCTATGACCGTTGGCAAGGATGTCAGCGGTCTATTCCCTGACGTT CTCAAGAACATGCAGACTGAAGACTTGGAGCAGAAGAAACTTGTATATCTGTACCTAATGAACTACGCAAAGACT CAGCCCGAACTCGTCATCCTCGCCGTCAACACTTTCGTCAAGGACGCCGACGATTCAAATCCTCTCGTTCGTGCC CTTGCCATCAGGACCATGGGCTGTCTCAGAGCAGAGAAGATTATCGATTACCTCTGCGATCCTTTGCAAAAAAGC CTGCGGGACGAGAATCCCTATGTCAGGAAGACCGCAGCACTCTGCGTAGCAAAACTGTACGACCTGAAACCAGAC TTGGTCATCGAAAATGGCTTCTTGACGCAATTGCATGAGATGATAGCTGATTCGAACCCGATGGTAGTCGCTAAC ACGGTCGCGGCTCTCACAGATATCCACAATTCTGCCACATCTAATCCCGCAACGCAAGCCGATGCTTCTGCCATT TTCAACATCACGGGTTCGATCCTCAACAAGCTTCTGATTGCGCTCAACGAATGTTCAGAATGGGGTCGTGTTGCC GTTTTGAACGCCCTTGCCCGATACGTAGCTCAGGACGAAAAGGAATCAGAGCATATCTGTGAACGTGTCGTACCA CAGTTTCAGCATATCAATGGGAGTGTGGTGCTCGCAGCAGTCAAGGTCATTATGATTCATATGCGTCACGTAACA AGAGAAGACCTCATCAAGCAACTCGTGAAGAAGATGGCGCCCCCACTAGTCACTCTACTCTCGTCACCTCCCGAA GTACAATGGGTGGCCCTCCGAAACATCAACCTCTTACTTCAGAAGCGATCCGATATCTTGTCAAACGAGATGAGA GTCTTTTTCTGCAAGTATAACGATCCGTTGTATGTCAAGGTGGAGAAACTGGATATCATGGTCCGTTTAGCTTCG GACAATAACGTAGATGCACTATTGAGCGAGTTGAAAGAGTACGCTTCCGAGGTGGATGTTGATTTCGTGCGGAAG AGTATCAAAGCTATCGGTCAGACGGCGATCAAGATCGAGTCTGGAGCTGAACGTTGCGTCAACGTTCTTCTCGAA CTCATTGCTACGAGAGTCAGCTACGTGGTTCAAGAAGCTGTCGTTGTCATGAAAGACATATTCCGCCGGTATCCA TCTACTTATGAAGGTGTTATCCCCACTCTGTGTGCCAACTTGGATGAACTAGAAGAACCAGAGGCTAAAGCATCC CTTATCTGGATTATTGGAGAGTATGCGAACAAGATCAACAATGCGGATTCTTTACTCGGGTTCTTTGTAGATAGC TTTACGGAGGAGTCGTACTCAGTTCAACTACAAACCCTCACCGCTGTTGTCAAACTTTTCCTCAAGAAACCCGAC ACATCACAAGGACTAGTGCAACGAATATTAGACACTGCCACTAAGGAATGCGACTCTCCAGATGTAAGAGACAGG GCATACATTTATTGGAGATTGCTTTCCACGGATCCTGGCGCTGCAAAGGCAGTAGTGTGGGCCGATAAACCTCCC ATCTCGATACCACGGACGACTGTCGCTCCAGCGTTGTTGGAGGAATTGTTGGGAGAGATACCGACACTTGCGAGT GTTTATCACAAACCTGCGGAAACGTTCATTGGGAAAGGAAGGGTTGGTGTTGACTCTGTTCAAAGAAAAGCAGGA GCGGATGATGATCGGCTTGCCGCGCACAAAGCGTTACAGACGGTCGCTGCAGGAAGACAAGCGGAGAACCTCCTT GATTTCGATGACGATGATATATCAACAACAAACGGCCAACCTTCAGGCCTTGCAGCAACAGAGGTTCTCTCACAA ACGCCAGCTGCTGCTAATCTTCTTTCCGGAACGTCGAGTAATCCGTTAGACGATCTCGTATCCATCTTTGGTACA AATGGTACTGGGGGTGGTGGCGGTGGATTTGGCGCGGCGTCTGGTTTAGCTCCGTCGGCCACTAATAATAACCAT GCGCCGGATCCGCTTGCTGGTTTGGGCGGGTTGTCGATCTCGGGTGGCTGTTCGTTAATGTCGCCTGATCAAACG TCACCGCAGCAACCGAAATCTGCGACGTCGCCGCAACAGCAACAAGAGGATTTGTTGGGATTGTTTTAG |
| Gene | >AgabiH97|037690 ATGAGCATTCGAGGTCCCCGCAAAGGCGAAAACTACGAGCTCAGCGTCGACCTCAACAGTGAATACCGCGATAAA CGAAAGGATGCAATTAAGCGCGTCATCGCCTCTATGACCGTTGGCAAGGGTCGCTATCCTTCAGTTTCTTATTTA CCTCGACGAACACCTAATCTCATTCCGACAGATGTCAGCGGTCTATTCCCTGACGTTCTCAAGAACATGCAGACT GAAGACTTGGAGCAGAAGAAACTTGTATATCTGTACCTAATGAACTACGCAAAGACTCAGCCCGAACTCGTCATC CTCGCCGTCAACACTTTCGTCAAGGACGCCGACGATTCAAATCCTCTCGTTCGTGCCCTTGCCATCAGGACCATG GGCTGTCTCAGAGCAGAGAAGATTATCGATTACCTCTGCGATCCTTTGCAAAAAAGCCTGCGGGACGAGAATCCC TATGTCAGGAAGACCGCAGCACTCTGCGTAGCAAAACTGTACGACCTGAAACCAGACTTGGTCATCGAAAATGGC TTCTTGACGCAATTGCATGAGATGATAGCTGATTCGAACCCGATGGTGAGCCATCAATGCCTCCCTTGCCCTTTT ACGCTCATCTTGGCTTTTCTTGAACTGTAGGTAGTCGCTAACACGGTCGCGGCTCTCACAGATATCCACAATTCT GCCACATCTAATCCCGCAACGCAAGCCGATGCTTCTGCCATTTTCAACATCACGGGTTCGATCCTCAACAAGCTT CTGATTGCGCTCAACGAATGTTCAGAATGGGGTCGTGTTGCCGTTTTGAACGCCCTTGCCCGATACGTAGCTCAG GACGAAAAGGAATCAGAGCATATCTGTGAACGTGTCGTACCACAGTTTCAGCATATCAATGGGAGTGTGGTGCTC GCAGCAGTCAAGGTCATTATGATTCATATGCGTCACGTAACAAGAGAAGACCTCATCAAGCAACTCGTGAAGAAG ATGGCGCCCCCACTAGTCACTCTACTCTCGTCACCTCCCGAAGTACAATGGGTGGCCCTCCGAAACATCAACCTC TTACTTCAGAAGCGATCCGATATCTTGTCAAACGAGATGAGAGTCTTTTTCTGCAAGTATAACGATCCGTTGTAT GTCAAGGTGGAGAAACTGGATATCATGGTCCGTTTAGCTTCGGACAATAACGTAGATGCACTATTGAGCGAGTTG AAAGAGTGAGTAGTCTTTCGTACTTGGAAGTTCGGATTTCTCAGATACCTTTCATCCTAGGTACGCTTCCGAGGT GGATGTTGATTTCGTGCGGAAGAGTATCAAAGCTATCGGTCAGACGGCGATCAAGATCGAGTCTGGAGCTGAACG TTGCGTCAACGTTCTTCTCGAACTCATTGCTACGAGAGTCAGCTACGTGGTTCAAGAAGCTGTCGTTGTCATGAA AGTAAGTTTTATCCATGTATGAGGGGGGTTTACACTTCATGCTTCTTTATACAGGACATATTCCGCCGGTATCCA TCTACTTATGAAGGTGTTATCCCCACTCTGTGTGCCAACTTGGATGAACTAGAAGAACCAGAGGCTAAAGCATCC CTTATCTGGATTATTGGAGAGTATGCGAACAAGATCAACAATGCGGATTCTTTACTCGGGTTCTTTGTAGATAGC TTTACGGAGGAGTCGTACTCAGTGAGCATAACTTCTACTTCTTTCTTTTATGTAGTATACTTCCCCATCACGCTT CTTCCGCTATTACTCCCGTGCGACACCTTCCCTCGTTCTTTTAAGGTCTCTTTCTCCATCGTCCGAAGCTGATTG GGTTCGCTTAAAAACAGGTTCAACTACAAACCCTCACCGCTGTTGTCAAACTTTTCCTCAAGAAACCCGACACAT CACAAGGACTAGTGCAACGAATATTAGACACTGCCACTAAGGAATGCGACTCTCCAGATGTAAGAGACAGGGCAT ACATTTATTGGAGATTGCTTTCCACGGATCCTGGCGCTGCAAAGGCAGTAGTGTGGGCCGATAAACCTCCCATCT CGATACCACGGACGACTGTCGCTCCAGCGTTGTTGGAGGAATTGTTGGGAGAGATACCGACACTTGCGAGTGTTT ATCACAAACCTGCGGAAACGTTCATTGGGAAAGGAAGGGTTGGTGTTGACTCTGTTCAAAGAAAAGCAGGGTATG CTTTGGGTCTATATATGAATGTCAGTTACTCATATATTAACCAATTTTTGGTAGAGCGGATGATGATCGGCTTGC CGCGCACAAAGCGTTACAGACGGTCGCTGCAGGAAGACAAGCGGAGAACCTCCTGTATGTCCACCCTCTCTCCCT TAATTTGTTAATTTTGGCTAATCTTATCTTTCCTTCCTTTTTCTTAGTGATTTCGATGACGATGATATATCAACA ACAAACGGCCAACCTTCAGGCCTTGCAGCAACAGAGGTTCTCTCACAAACGCCAGCTGCTGCTAATCTTCTTTCC GGAACGTCGAGTAATCCGTTAGACGATCTCGTATCCATCTTTGGTACAAATGGTACTGGGGGTGGTGGCGGTGGA TTTGGCGCGGCGTCTGGTTTAGCTCCGTCGGCCACTAATAATAACCATGCGCCGGATCCGCTTGCTGGTTTGGGC GGGTTGTCGATCTCGGGTGGCTGTTCGTTAATGTCGCCTGATCAAACGTCACCGCAGCAACCGAAATCTGCGACG TCGCCGCAACAGCAACAAGAGGATTTGTTGGGATTGTTTTAG |