Protein ID | AgabiH97|037530 |
Gene name | |
Location | scaffold_13:1038728..1040605 |
Strand | - |
Gene length (bp) | 1877 |
Transcript length (bp) | 1566 |
Coding sequence length (bp) | 1566 |
Protein length (aa) | 522 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 23 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 484.25 | 211.10 | 757.40 |
Initials | Initials knots | 204.70 | 116.07 | 293.33 |
Pileal_Stipeal_center | Stage I stipe center | 383.13 | 201.54 | 564.72 |
Pileal_Stipeal_shell | Stage I stipe shell | 239.57 | 134.18 | 344.95 |
DIF_stipe_center | Stage II stipe center | 332.37 | 176.79 | 487.94 |
DIF_stipe_shell | Stage II stipe shell | 218.27 | 120.68 | 315.86 |
DIF_stipe_skin | Stage II stipe skin | 264.41 | 126.01 | 402.80 |
DIF_cap_skin | Stage II cap skin | 196.06 | 111.86 | 280.26 |
DIF_cap_tissue | Stage II cap tissue | 279.47 | 153.76 | 405.19 |
DIF_gill_tissue | Stage II gill tissue | 364.32 | 179.42 | 549.22 |
YFB_stipe_center | Young fruiting body stipe center | 277.23 | 138.26 | 416.20 |
YFB_stipe_shell | Young fruiting body stipe shell | 140.53 | 81.13 | 199.94 |
YFB_stipe_skin | Young fruiting body stipe skin | 384.07 | 194.86 | 573.29 |
YFB_cap_skin | Young fruiting body cap skin | 202.20 | 115.32 | 289.07 |
YFB_cap_tissue | Young fruiting body cap tissue | 467.06 | 230.46 | 703.67 |
YFB_gill_tissue | Young fruiting body gill tissue | 143.12 | 73.99 | 212.25 |
YFB_veil | Young fruiting body veil | 187.18 | 106.60 | 267.76 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.562694 | no |
Casing | YFB_stipe_center | 0.141674 | no |
Casing | YFB_stipe_shell | 0.000613 | yes |
Casing | YFB_stipe_skin | 0.652200 | no |
Casing | YFB_cap_skin | 0.009123 | yes |
Casing | YFB_cap_tissue | 0.959501 | no |
Casing | YFB_gill_tissue | 0.000613 | yes |
Casing | YFB_veil | 0.004928 | yes |
Casing | Initials | 0.010093 | yes |
Casing | Pileal_Stipeal_center | 0.642028 | no |
Casing | Pileal_Stipeal_shell | 0.040947 | yes |
Casing | DIF_stipe_center | 0.356545 | no |
Casing | DIF_stipe_shell | 0.020523 | yes |
Casing | DIF_stipe_skin | 0.112257 | no |
Casing | DIF_cap_skin | 0.006387 | yes |
Casing | DIF_cap_tissue | 0.136312 | no |
DIF_gill_tissue | YFB_stipe_center | 0.537304 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.001140 | yes |
DIF_gill_tissue | YFB_stipe_skin | 0.936445 | no |
DIF_gill_tissue | YFB_cap_skin | 0.070862 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.600995 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.002951 | yes |
DIF_gill_tissue | YFB_veil | 0.035765 | yes |
YFB_stipe_center | YFB_stipe_shell | 0.024187 | yes |
YFB_stipe_center | YFB_stipe_skin | 0.426972 | no |
YFB_stipe_center | YFB_cap_skin | 0.396501 | no |
YFB_stipe_center | YFB_cap_tissue | 0.143900 | no |
YFB_stipe_center | YFB_gill_tissue | 0.039612 | yes |
YFB_stipe_center | YFB_veil | 0.263696 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.000613 | yes |
YFB_stipe_shell | YFB_cap_skin | 0.265846 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.000613 | yes |
YFB_stipe_shell | YFB_gill_tissue | 0.976402 | no |
YFB_stipe_shell | YFB_veil | 0.422501 | no |
YFB_stipe_skin | YFB_cap_skin | 0.039165 | yes |
YFB_stipe_skin | YFB_cap_tissue | 0.703835 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.001140 | yes |
YFB_stipe_skin | YFB_veil | 0.017783 | yes |
YFB_cap_skin | YFB_cap_tissue | 0.005302 | yes |
YFB_cap_skin | YFB_gill_tissue | 0.336860 | no |
YFB_cap_skin | YFB_veil | 0.881492 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.000613 | yes |
YFB_cap_tissue | YFB_veil | 0.001140 | yes |
YFB_gill_tissue | YFB_veil | 0.499498 | no |
Initials | DIF_gill_tissue | 0.076262 | no |
Initials | YFB_stipe_center | 0.430690 | no |
Initials | YFB_stipe_shell | 0.241143 | no |
Initials | YFB_stipe_skin | 0.042475 | yes |
Initials | YFB_cap_skin | 0.983554 | no |
Initials | YFB_cap_tissue | 0.005671 | yes |
Initials | YFB_gill_tissue | 0.315510 | no |
Initials | YFB_veil | 0.859320 | no |
Initials | Pileal_Stipeal_center | 0.038047 | yes |
Initials | Pileal_Stipeal_shell | 0.726896 | no |
Initials | DIF_stipe_center | 0.116868 | no |
Initials | DIF_stipe_shell | 0.905042 | no |
Initials | DIF_stipe_skin | 0.550636 | no |
Initials | DIF_cap_skin | 0.939658 | no |
Initials | DIF_cap_tissue | 0.387205 | no |
Pileal_Stipeal_center | DIF_gill_tissue | 0.939857 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.423390 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.001140 | yes |
Pileal_Stipeal_center | YFB_stipe_skin | 0.996364 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.034837 | yes |
Pileal_Stipeal_center | YFB_cap_tissue | 0.687384 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.001625 | yes |
Pileal_Stipeal_center | YFB_veil | 0.017226 | yes |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.160253 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.779887 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.072330 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.358572 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.025711 | yes |
Pileal_Stipeal_center | DIF_cap_tissue | 0.411911 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.246193 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.769593 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.071968 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.166446 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.695094 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.035765 | yes |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.111334 | no |
Pileal_Stipeal_shell | YFB_veil | 0.523497 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.362726 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.856255 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.866359 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.626514 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.743888 | no |
DIF_stipe_center | DIF_gill_tissue | 0.876147 | no |
DIF_stipe_center | YFB_stipe_center | 0.702761 | no |
DIF_stipe_center | YFB_stipe_shell | 0.001140 | yes |
DIF_stipe_center | YFB_stipe_skin | 0.781518 | no |
DIF_stipe_center | YFB_cap_skin | 0.112874 | no |
DIF_stipe_center | YFB_cap_tissue | 0.389377 | no |
DIF_stipe_center | YFB_gill_tissue | 0.002951 | yes |
DIF_stipe_center | YFB_veil | 0.056958 | no |
DIF_stipe_center | DIF_stipe_shell | 0.208451 | no |
DIF_stipe_center | DIF_stipe_skin | 0.626650 | no |
DIF_stipe_center | DIF_cap_skin | 0.093007 | no |
DIF_stipe_center | DIF_cap_tissue | 0.708608 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.129397 | no |
DIF_stipe_shell | YFB_stipe_center | 0.564908 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.155976 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.077698 | no |
DIF_stipe_shell | YFB_cap_skin | 0.887570 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.012577 | yes |
DIF_stipe_shell | YFB_gill_tissue | 0.215620 | no |
DIF_stipe_shell | YFB_veil | 0.732664 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.687482 | no |
DIF_stipe_shell | DIF_cap_skin | 0.831485 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.529214 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.468557 | no |
DIF_stipe_skin | YFB_stipe_center | 0.942464 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.052948 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.364018 | no |
DIF_stipe_skin | YFB_cap_skin | 0.523681 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.119615 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.075734 | no |
DIF_stipe_skin | YFB_veil | 0.371072 | no |
DIF_stipe_skin | DIF_cap_skin | 0.463020 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.929316 | no |
DIF_cap_skin | DIF_gill_tissue | 0.054776 | no |
DIF_cap_skin | YFB_stipe_center | 0.347907 | no |
DIF_cap_skin | YFB_stipe_shell | 0.321718 | no |
DIF_cap_skin | YFB_stipe_skin | 0.030372 | yes |
DIF_cap_skin | YFB_cap_skin | 0.958779 | no |
DIF_cap_skin | YFB_cap_tissue | 0.002084 | yes |
DIF_cap_skin | YFB_gill_tissue | 0.400463 | no |
DIF_cap_skin | YFB_veil | 0.934218 | no |
DIF_cap_skin | DIF_cap_tissue | 0.304013 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.532556 | no |
DIF_cap_tissue | YFB_stipe_center | 0.989426 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.013186 | yes |
DIF_cap_tissue | YFB_stipe_skin | 0.415145 | no |
DIF_cap_tissue | YFB_cap_skin | 0.352090 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.130818 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.026461 | yes |
DIF_cap_tissue | YFB_veil | 0.223259 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|037530 MFSQKLCVAFLTLALFSFSAQAAPQYHHLAGRDILSSRTGTAIAVAARQDGGFGDRRKGGGNNNGGNNNGGNNQQ GGGNNQGGGNNNQGGNNNQGGNQGGNNGANDAQTSLTLDPAVIAQGFANDGQDVPTDGQVASLTSTNNFINFCLT VDLPISNGKQVKGGSCNPAPMGTIASTSNMPSSKFTFPQNFGAVKSNTPFTIKMAIKNLQTGNFVNADSNYYSAP QQLNAQGTIIGHSHVVVEQLDAIDQTTPTDPNKFAFFKGLNVAAVNGELSADVSSGLPAGVYKLSSINAAANHQP VLVAVAQHGSLDDAVYFFVTDDGQPPAGAGAGNGAGAGNGAGAGNGAGNGNGAGNGNGAGAGDDAGAGAGAGDDA GAGAGSGDDAGAGDDAGAGNGAGAGNGGNGKNGNGKGGKGSGKGGNGKGAAAGDATASATATATATDQDGAATAT ASSADPAATDAPAGNDNADNGKGASGDQNTKGGSRPSRGSNDNGFPRGSGRGGFGRPSGGNRPRFGFQGRN* |
Coding | >AgabiH97|037530 ATGTTCTCGCAAAAGCTTTGCGTCGCCTTCTTGACTCTCGCTCTCTTCTCGTTTTCTGCTCAGGCAGCTCCTCAA TATCACCATCTTGCTGGCCGCGATATACTTTCTAGTCGAACTGGAACCGCAATCGCCGTTGCTGCCAGACAGGAT GGAGGTTTCGGTGACAGAAGGAAGGGTGGTGGCAACAACAACGGAGGCAACAACAACGGAGGCAACAACCAACAA GGTGGCGGCAACAATCAAGGTGGAGGCAACAACAACCAAGGTGGAAACAATAATCAAGGTGGTAACCAAGGCGGA AACAATGGCGCCAATGACGCTCAAACGTCTCTGACGCTTGATCCCGCGGTCATTGCCCAAGGATTCGCCAATGAC GGACAAGACGTTCCCACTGATGGCCAGGTGGCCTCTCTGACGTCGACCAACAACTTCATCAACTTTTGCTTGACT GTCGACCTTCCCATCTCCAATGGCAAACAGGTCAAAGGCGGTTCCTGTAACCCCGCCCCCATGGGCACTATTGCT TCTACTAGCAACATGCCTTCGTCCAAGTTTACTTTCCCCCAGAACTTTGGAGCCGTAAAATCGAACACGCCTTTC ACGATCAAAATGGCGATAAAGAACTTACAGACCGGTAACTTTGTCAACGCCGACAGTAACTACTATTCGGCGCCT CAACAGCTTAACGCTCAAGGCACAATTATCGGTCACTCCCATGTCGTTGTTGAACAGCTGGATGCCATCGATCAG ACGACGCCCACCGATCCCAATAAGTTTGCATTCTTCAAGGGCTTAAATGTCGCCGCTGTCAATGGTGAACTCTCT GCCGATGTATCGAGCGGTCTTCCTGCCGGTGTCTATAAATTGTCTTCTATCAATGCCGCCGCCAACCATCAACCC GTCCTGGTCGCTGTCGCTCAACATGGTTCCCTTGACGACGCCGTCTATTTCTTTGTTACCGATGACGGTCAACCT CCTGCTGGTGCTGGTGCTGGTAATGGTGCCGGCGCAGGCAATGGCGCTGGTGCTGGCAATGGTGCTGGTAATGGC AATGGTGCTGGTAATGGCAATGGTGCTGGCGCTGGTGACGATGCTGGCGCTGGTGCTGGTGCTGGTGACGATGCT GGTGCTGGTGCTGGTAGTGGCGATGATGCCGGTGCTGGTGATGATGCTGGTGCTGGCAATGGTGCTGGCGCTGGC AACGGTGGCAATGGCAAAAACGGGAATGGCAAGGGCGGTAAAGGCAGTGGCAAGGGCGGTAACGGCAAAGGCGCT GCCGCAGGGGATGCCACTGCTTCTGCTACGGCGACTGCTACTGCAACCGATCAGGATGGCGCTGCCACCGCTACT GCTTCTTCCGCCGACCCCGCCGCCACTGATGCCCCAGCTGGCAACGACAACGCCGATAATGGAAAGGGAGCTTCA GGTGACCAGAATACGAAAGGTGGCTCTAGGCCGTCAAGGGGTTCAAACGACAACGGCTTCCCCAGAGGTTCCGGT AGGGGGGGTTTTGGACGTCCATCTGGCGGTAACCGCCCGAGGTTTGGTTTTCAAGGAAGGAACTGA |
Transcript | >AgabiH97|037530 ATGTTCTCGCAAAAGCTTTGCGTCGCCTTCTTGACTCTCGCTCTCTTCTCGTTTTCTGCTCAGGCAGCTCCTCAA TATCACCATCTTGCTGGCCGCGATATACTTTCTAGTCGAACTGGAACCGCAATCGCCGTTGCTGCCAGACAGGAT GGAGGTTTCGGTGACAGAAGGAAGGGTGGTGGCAACAACAACGGAGGCAACAACAACGGAGGCAACAACCAACAA GGTGGCGGCAACAATCAAGGTGGAGGCAACAACAACCAAGGTGGAAACAATAATCAAGGTGGTAACCAAGGCGGA AACAATGGCGCCAATGACGCTCAAACGTCTCTGACGCTTGATCCCGCGGTCATTGCCCAAGGATTCGCCAATGAC GGACAAGACGTTCCCACTGATGGCCAGGTGGCCTCTCTGACGTCGACCAACAACTTCATCAACTTTTGCTTGACT GTCGACCTTCCCATCTCCAATGGCAAACAGGTCAAAGGCGGTTCCTGTAACCCCGCCCCCATGGGCACTATTGCT TCTACTAGCAACATGCCTTCGTCCAAGTTTACTTTCCCCCAGAACTTTGGAGCCGTAAAATCGAACACGCCTTTC ACGATCAAAATGGCGATAAAGAACTTACAGACCGGTAACTTTGTCAACGCCGACAGTAACTACTATTCGGCGCCT CAACAGCTTAACGCTCAAGGCACAATTATCGGTCACTCCCATGTCGTTGTTGAACAGCTGGATGCCATCGATCAG ACGACGCCCACCGATCCCAATAAGTTTGCATTCTTCAAGGGCTTAAATGTCGCCGCTGTCAATGGTGAACTCTCT GCCGATGTATCGAGCGGTCTTCCTGCCGGTGTCTATAAATTGTCTTCTATCAATGCCGCCGCCAACCATCAACCC GTCCTGGTCGCTGTCGCTCAACATGGTTCCCTTGACGACGCCGTCTATTTCTTTGTTACCGATGACGGTCAACCT CCTGCTGGTGCTGGTGCTGGTAATGGTGCCGGCGCAGGCAATGGCGCTGGTGCTGGCAATGGTGCTGGTAATGGC AATGGTGCTGGTAATGGCAATGGTGCTGGCGCTGGTGACGATGCTGGCGCTGGTGCTGGTGCTGGTGACGATGCT GGTGCTGGTGCTGGTAGTGGCGATGATGCCGGTGCTGGTGATGATGCTGGTGCTGGCAATGGTGCTGGCGCTGGC AACGGTGGCAATGGCAAAAACGGGAATGGCAAGGGCGGTAAAGGCAGTGGCAAGGGCGGTAACGGCAAAGGCGCT GCCGCAGGGGATGCCACTGCTTCTGCTACGGCGACTGCTACTGCAACCGATCAGGATGGCGCTGCCACCGCTACT GCTTCTTCCGCCGACCCCGCCGCCACTGATGCCCCAGCTGGCAACGACAACGCCGATAATGGAAAGGGAGCTTCA GGTGACCAGAATACGAAAGGTGGCTCTAGGCCGTCAAGGGGTTCAAACGACAACGGCTTCCCCAGAGGTTCCGGT AGGGGGGGTTTTGGACGTCCATCTGGCGGTAACCGCCCGAGGTTTGGTTTTCAAGGAAGGAACTGA |
Gene | >AgabiH97|037530 ATGTTCTCGCAAAAGCTTTGCGTCGCCTTCTTGACTCTCGCTCTCTTCTCGTTTTCTGCTCAGGCAGCTCCTCAA TATCACCATCTTGCTGGCCGCGATATACTTTCTGTATGTTCTTATCTTTCCCGGCGGCGCTCGATTTGAAGTGCT CATTATATGTGCGACTGACAGAGTCGAACTGGAACCGCAATCGCCGTTGCTGCCAGACAGGATGGAGGTTTCGGT GAGTCGTGTTTTGTTTGCTACGTAGTGTTTTACTAAAGCTCCATCCCAGGTGACAGAAGGAAGGGTACGTGAATT GTACTGTTAGTTTGGATTCCCAGAAACAGAAACTTTATACCACAGGTGGTGGCAACAACAACGGAGGCAACAACA ACGGAGGCAACAACCAACAAGGTGGTGGCAACAACCAACAAGGTGGCGGCAACAATCAACAAGGTGGCGGCAACA ATCAAGGTGGAGGCAACAACAACCAAGGTGGAAACAATAATCAAGGTGGTAACCAAGGCGGAAACAATGGCGCCA ATGACGCTCAAACGTCTCTGAGTGAGTGGCCTCGCCTCGACGAGAGTGCATCCTGCTTAATTTTCTCCTAGCGCT TGATCCCGCGGTCATTGCCCAAGGATTCGCCAATGACGGACAAGACGTTCCCACTGATGGCCAGGTGGCCTCTCT GACGTCGACCAACAACTTCATCAACTTTTGCTTGACTGTCGACCTTCCCATCTCCAATGGCAAACAGGTCAAAGG CGGTTCCTGTAACCCCGCCCCCATGGGCACTATTGCTTCTACTAGCAACATGCCTTCGTCCAAGTTTACTTTCCC CCAGAACTTTGGAGCCGTAAAATCGAACACGCCTTTCACGATCAAAATGGCGATAAAGAACTTACAGACCGGTAA CTTTGTCAACGCCGACAGTAACTACTATTCGGCGCCTCAACAGCTTAACGCTCAAGGCACAATTATCGGTCACTC CCATGTCGTTGTTGAACAGCTGGATGCCATCGATCAGACGACGCCCACCGATCCCAATAAGTTTGCATTCTTCAA GGGCTTAAATGTCGCCGCTGTCAATGGTGAACTCTCTGCCGATGTATCGAGCGGTCTTCCTGCCGGTGTCTATAA ATTGTCTTCTATCAATGCCGCCGCCAACCATCAACCCGTCCTGGTCGCTGTCGCTCAACATGGTTCCCTTGACGA CGCCGTCTATGTGAGTGCAATTATACTTCGGCGCTATCTTGGTCTGACCTTCCGCCTAGTTCTTTGTTACCGATG ACGGTCAACCTCCTGCTGGTGCTGGTGCTGGTAATGGTGCCGGCGCAGGCAATGGCGCTGGTGCTGGCAATGGTG CTGGTAATGGCAATGGTGCTGGTAATGGCAATGGTGCTGGCGCTGGTGACGATGCTGGCGCTGGTGCTGGTGCTG GTGACGATGCTGGTGCTGGTGCTGGTAGTGGCGATGATGCCGGTGCTGGTGATGATGCTGGTGCTGGCAATGGTG CTGGCGCTGGCAACGGTGGCAATGGCAAAAACGGGAATGGCAAGGGCGGTAAAGGCAGTGGCAAGGGCGGTAACG GCAAAGGCGCTGCCGCAGGGGATGCCACTGCTTCTGCTACGGCGACTGCTACTGCAACCGATCAGGATGGCGCTG CCACCGCTACTGCTTCTTCCGCCGACCCCGCCGCCACTGATGCCCCAGCTGGCAACGACAACGCCGATAATGGAA AGGGAGCTTCAGGTGACCAGAATACGAAAGGTGGCTCTAGGCCGTCAAGGGGTTCAAACGACAACGGCTTCCCCA GAGGTTCCGGTAGGGGGGGTTTTGGACGTCCATCTGGCGGTAACCGCCCGAGGTTTGGTTTTCAAGGAAGGAACT GA |