Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|037310
Gene name
Locationscaffold_13:981478..982315
Strand-
Gene length (bp)837
Transcript length (bp)291
Coding sequence length (bp)291
Protein length (aa) 97

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus 0.4604 0.4943 0.3677 0.1687 0.4067 0.0204 0.3038 0.3703 0.1965 0.1466

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup16551
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H97 AgabiH97|037310 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|037310
MFEVIALLVDTVLMGFSDVSPMANLQADVHQTVVPVYSLTRRYRLYRRTYYPKSHKHRRPGSWVLCIVNNQLIGT
LNTIVAINVQVTHYKYKTFLL*
Coding >AgabiH97|037310
ATGTTCGAAGTCATTGCTTTACTCGTGGATACTGTTCTGATGGGTTTTTCAGATGTATCGCCTATGGCAAACTTG
CAGGCGGATGTCCATCAAACAGTGGTTCCCGTTTATTCTCTGACTCGGCGGTATCGCTTGTACCGCCGCACATAT
TATCCTAAGAGTCATAAACATCGACGACCTGGATCATGGGTCTTATGCATTGTCAACAATCAATTGATTGGGACC
CTCAACACAATTGTGGCAATCAACGTTCAAGTTACGCACTACAAGTACAAGACCTTTTTACTATAA
Transcript >AgabiH97|037310
ATGTTCGAAGTCATTGCTTTACTCGTGGATACTGTTCTGATGGGTTTTTCAGATGTATCGCCTATGGCAAACTTG
CAGGCGGATGTCCATCAAACAGTGGTTCCCGTTTATTCTCTGACTCGGCGGTATCGCTTGTACCGCCGCACATAT
TATCCTAAGAGTCATAAACATCGACGACCTGGATCATGGGTCTTATGCATTGTCAACAATCAATTGATTGGGACC
CTCAACACAATTGTGGCAATCAACGTTCAAGTTACGCACTACAAGTACAAGACCTTTTTACTATAA
Gene >AgabiH97|037310
ATGTTCGAAGTCATTGCTTTACTCGTGGATACTGTTCTGGTAAGTCCATCCCCAAGAATGCAAAGAATGATAACT
CAGCTTTTCAGATGGGTTTTTCAGATGTATCGCCTATGGCAAACTTGCAGGCGGATGTCCATCAAACAGTGGTTC
CCGTTTATTCTCTGACTCGGCGGTATCGCTTGTACCGCCGCACATATTATCCTAAGAGTCATAAACATCGACGAC
CTGGATCATGGGTCTTATGCATTGTCAACAATCAATGTGAACGTCGGGCCTGGAATTGTGATGGTTTTGTTTCTA
GCTTGGACCATGGTGCTGAACGCCGCGGCATCGTTAAAAGCGAGTGACAAATTACGAAGGCACTTTTCCTTGCGT
CAGGACTCTTGATATGGTTTGGAAGACTTTACAACTCCGTGCAGTGCACCGAGGCAACTCCCACTTCTCATGCCT
TTTCTCATAGAATTTGGTGTTTTGAATCTCTCTATATGCATCACGCACTTCGCGGTCTATATTTGGCTATAACCG
CTTCGCCATCCACACAGTGATTGGGACCCTCGTGAGTCTTTGCAAGATTCCTTTTTAGAGGCCAAGGACTGAATT
TGGCATTCTTGTAGAACACAATTGTGGTTGGCATTGCGCGCAACCTTAGTATCATTCGCATCGGGAAGAATAGAT
AAGAAGAGGATGATTATAGCCCCATTAATTTCCCTGCAAAAGCCAGACTGTTGACGAGAGGTAGGCAATCAACGT
TAGGCGCACTGTATTCCCACCATGTACTGTACTGAGACGGCACAGGTTCAAGTTACGCACTACAAGTACAAGACC
TTTTTACTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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