Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|037300
Gene name
Locationscaffold_13:979391..981451
Strand+
Gene length (bp)2060
Transcript length (bp)1884
Coding sequence length (bp)1884
Protein length (aa) 628

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12937 F-box-like F-box-like 4.8E-09 40 82

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6215 0.5076 0.1042 0.0576 0.2389 0.0114 0.0803 0.2345 0.145 0.0112

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID1
Orthogroup12267
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|037300
Agaricus bisporus var bisporus H97 AgabiH97|037300 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|037300
MATFVEGERQYTNMTYDLIPSAISRLELDDTPHWTLRVTPELLSDIFTWCIETNEEASFNVSQVCRRWRCIALST
PQLWRKLPFRKWFSDVTEECRFITFLSEDYLLRSGGMPITFSWHPWHPLAQDLFQVLLQHVERWGDVNLVAHDKL
TIYISNLQDHLQSLYALKVTITNDSGSVSLQPFQSAPNLRCFSLIDRRTDTDVPVLANGAPWNQVTHISLSLDTT
HNFDYHSLSLFSNLTYLHIHWPRWTLIPEAIAREHLRKPLIFKSCRYLQLDFSLPRGVTHNAPFSNPLQNMYFPN
LEYLYIDYDATSFTDPYTLTELESFIGRLKTRNATPLKSFHWYRHCNYYANPTPAPPHVAATQSRTVFRLLPKTL
SNLRVTLFPRFLLEKLFNVLTTEGTFLPELKTLDLGIDVSVLISPGEFDWFCDKLKLMMATTKRQLHEFRIQLLL
VDPRPRFTIPPWQIIFRLDGWKDILRDDVERNLGCSIGREEDEFMSGTDAESIWVKNLRRALLEFMRSDDVLSQH
NRLRTNPLFRLETINRWLKLFKTNANSRRWTSLGHDGIMYVSPRSPLRESESWVYGVSDDPSDAEDIRYIDNDRV
PGVPCSWLDVRDLTMYFSPNNVSLTTW*
Coding >AgabiH97|037300
ATGGCAACATTCGTAGAAGGTGAAAGGCAGTATACAAACATGACGTACGATCTCATTCCTTCAGCAATATCTCGT
CTCGAACTTGATGATACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGT
ATAGAAACCAACGAAGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACT
CCTCAACTTTGGCGTAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTT
CTCTCTGAAGATTATTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCG
CAAGATCTATTTCAGGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTA
ACCATCTACATTTCCAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGT
GGTTCTGTTTCACTTCAGCCATTTCAATCCGCTCCCAACTTACGATGTTTCTCACTCATTGATCGTCGGACCGAT
ACCGACGTCCCTGTATTGGCAAATGGAGCGCCCTGGAATCAAGTAACTCACATTTCCCTCTCGCTCGATACCACG
CACAATTTCGATTACCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACT
TTGATCCCAGAGGCCATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTG
GATTTCTCTCTCCCTCGCGGAGTCACCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAAT
CTCGAATATCTTTACATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAATTAGAATCCTTC
ATTGGAAGACTGAAAACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCG
AATCCGACACCGGCGCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTT
TCAAACCTCCGCGTTACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACT
TTCCTACCGGAATTGAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGG
TTTTGCGATAAACTCAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTACTATTG
GTTGATCCAAGACCACGGTTTACTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTT
CGAGATGACGTGGAGCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCT
GAATCAATCTGGGTCAAAAATTTACGAAGAGCTCTACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCAC
AACCGTTTACGAACAAATCCCCTTTTCAGACTTGAAACCATTAACAGGTGGTTGAAACTGTTCAAGACGAATGCT
AATTCACGGCGATGGACCTCGCTAGGTCATGATGGCATTATGTATGTTTCGCCTCGTTCTCCGCTACGAGAATCA
GAATCATGGGTATATGGGGTTTCAGATGACCCAAGTGATGCTGAGGATATTCGATATATTGACAATGATCGTGTT
CCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACTTCTCGCCCAACAATGTGAGCTTGACC
ACCTGGTAG
Transcript >AgabiH97|037300
ATGGCAACATTCGTAGAAGGTGAAAGGCAGTATACAAACATGACGTACGATCTCATTCCTTCAGCAATATCTCGT
CTCGAACTTGATGATACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGT
ATAGAAACCAACGAAGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACT
CCTCAACTTTGGCGTAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTT
CTCTCTGAAGATTATTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCG
CAAGATCTATTTCAGGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTA
ACCATCTACATTTCCAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGT
GGTTCTGTTTCACTTCAGCCATTTCAATCCGCTCCCAACTTACGATGTTTCTCACTCATTGATCGTCGGACCGAT
ACCGACGTCCCTGTATTGGCAAATGGAGCGCCCTGGAATCAAGTAACTCACATTTCCCTCTCGCTCGATACCACG
CACAATTTCGATTACCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACT
TTGATCCCAGAGGCCATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTG
GATTTCTCTCTCCCTCGCGGAGTCACCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAAT
CTCGAATATCTTTACATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAATTAGAATCCTTC
ATTGGAAGACTGAAAACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCG
AATCCGACACCGGCGCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTT
TCAAACCTCCGCGTTACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACT
TTCCTACCGGAATTGAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGG
TTTTGCGATAAACTCAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTACTATTG
GTTGATCCAAGACCACGGTTTACTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTT
CGAGATGACGTGGAGCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCT
GAATCAATCTGGGTCAAAAATTTACGAAGAGCTCTACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCAC
AACCGTTTACGAACAAATCCCCTTTTCAGACTTGAAACCATTAACAGGTGGTTGAAACTGTTCAAGACGAATGCT
AATTCACGGCGATGGACCTCGCTAGGTCATGATGGCATTATGTATGTTTCGCCTCGTTCTCCGCTACGAGAATCA
GAATCATGGGTATATGGGGTTTCAGATGACCCAAGTGATGCTGAGGATATTCGATATATTGACAATGATCGTGTT
CCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACTTCTCGCCCAACAATGTGAGCTTGACC
ACCTGGTAG
Gene >AgabiH97|037300
ATGGCAACATTCGTAGAAGGTGAAAGGCAGTATACAAACATGGTGCGTTTTTCGAATAAAAGAACACTCAGATCG
ACATTTGACATAGTAATATTGTTTTCGTAGACGTACGATCTCATTCCTTCAGCAATATCTCGTCTCGAACTTGAT
GATACACCTCATTGGACTCTTCGAGTTACTCCTGAACTCCTTTCCGACATCTTCACATGGTGTATAGAAACCAAC
GAAGAGGCTTCATTTAACGTCTCTCAAGTTTGTCGTCGATGGAGGTGCATCGCTTTGTCTACTCCTCAACTTTGG
CGTAAACTTCCTTTCCGCAAATGGTTCTCTGATGTTACTGAAGAATGCCGGTTCATCACTTTTCTCTCTGAAGAT
TATTTATTGAGATCCGGGGGGATGCCTATCACTTTCTCTTGGCACCCGTGGCACCCACTGGCGCAAGATCTATTT
CAGGTCTTACTTCAACATGTCGAACGATGGGGAGACGTAAATCTGGTCGCGCACGATAAATTAACCATCTACATT
TCCAATCTCCAAGATCATTTGCAATCCTTGTATGCTCTTAAAGTCACTATAACCAACGACAGTGGTTCTGTTTCA
CTTCAGCCATTTCAATCCGCTCCCAACTTACGATGTTTCTCACTCATTGATCGTCGGACCGATACCGACGTCCCT
GTATTGGCAAATGGAGCGCCCTGGAATCAAGTAACTCACATTTCCCTCTCGCTCGATACCACGCACAATTTCGAT
TACCACTCGCTATCCTTATTTTCAAATCTCACTTATCTGCATATTCATTGGCCACGGTGGACTTTGATCCCAGAG
GCCATTGCTCGCGAACACTTGAGAAAACCACTCATCTTCAAATCGTGTCGCTACCTCCAGTTGGATTTCTCTCTC
CCTCGCGGAGTCACCCACAATGCACCCTTTTCCAATCCCCTCCAGAACATGTACTTCCCCAATCTCGAATATCTT
TACATCGACTACGACGCCACGTCATTCACCGATCCGTACACGCTCACTGAATTAGAATCCTTCATTGGAAGACTG
AAAACTCGTAATGCCACTCCGCTCAAGAGCTTTCATTGGTACCGACATTGCAACTACTATGCGAATCCGACACCG
GCGCCGCCACATGTTGCAGCCACTCAGTCTCGAACAGTATTCCGTCTATTACCAAAAACCCTTTCAAACCTCCGC
GTTACATTATTCCCTCGGTTTTTATTGGAGAAATTGTTCAATGTTCTTACGACCGAGGGCACTTTCCTACCGGAA
TTGAAGACGTTGGATCTTGGAATCGATGTTAGCGTACTGATCTCGCCAGGAGAGTTTGACTGGTTTTGCGATAAA
CTCAAACTCATGATGGCGACTACCAAGAGACAATTACACGAGTTTCGGATTCAGTTACTATTGGTTGATCCAAGA
CCACGGTTTACTATTCCCCCGTGGCAAATTATTTTTAGGCTTGATGGTTGGAAGGATATACTTCGAGATGACGTG
GAGCGGAACTTGGGGTGTTCTATAGGTAGGGAGGAGGATGAATTCATGAGCGGCACAGACGCTGAATCAATCTGG
GTAAAGAAACCTACTTCTTTTCAATCCCGAAACCTGATATTTTTCTTCTTTCAGGTCAAAAATTTACGAAGAGCT
CTACTTGAATTTATGCGTTCCGATGACGTACTCTCACAGCACAACCGTTTACGAACAAATCCCCTTTTCAGACTT
GAAACCATTAACAGGTGGTTGAAACTGTTCAAGACGAATGCTAATTCACGGCGATGGACCTCGCTAGGTCATGAT
GGCATTATGTATGTTTCGCCTCGTTCTCGTGAGTACAAATAGCATTTTATCCCCAAAGTTCTCAACCTCTGAGCC
GCTATGCTCTAGCGCTACGAGAATCAGAATCATGGGTATATGGGGTTTCAGATGACCCAAGTGATGCTGAGGATA
TTCGATATATTGACAATGATCGTGTTCCCGGTGTTCCATGCTCGTGGTTGGATGTCCGGGATTTAACCATGTACT
TCTCGCCCAACAATGTGAGCTTGACCACCTGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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