Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|037200
Gene name
Locationscaffold_13:962308..964943
Strand+
Gene length (bp)2635
Transcript length (bp)1698
Coding sequence length (bp)1698
Protein length (aa) 566

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.2E-31 101 465

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 61 513 6.0E-85
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 60 518 7.0E-71
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 90 535 8.0E-65
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 63 563 8.0E-58
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 86 515 1.0E-53
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 61 513 6.0E-85
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 60 518 7.0E-71
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 90 535 8.0E-65
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 63 563 8.0E-58
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 86 515 1.0E-53
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 86 389 5.0E-33
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 86 402 6.0E-33
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 86 518 7.0E-29
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 86 565 3.0E-26
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 90 292 3.0E-25
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 88 408 7.0E-23
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 90 565 1.0E-22
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 90 420 6.0E-22
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 64 363 7.0E-22
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 59 526 1.0E-21
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 16 513 2.0E-20
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 32 565 1.0E-18
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 89 477 1.0E-17
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 170 303 7.0E-16
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 84 383 1.0E-14
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 71 523 2.0E-14
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 90 518 2.0E-13
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 86 323 6.0E-13
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 83 270 9.0E-13
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 78 510 4.0E-12
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 86 383 4.0E-11
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 86 383 4.0E-11
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 68 495 6.0E-11
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 89 366 3.0E-10
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 98 408 4.0E-08
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 98 408 4.0E-08
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 98 465 9.0E-08
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 90 389 1.0E-07
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 162 181 19
2 186 208 22
3 221 243 22
4 253 275 22
5 320 342 22
6 362 381 19
7 390 409 19
8 414 436 22
9 448 470 22
10 480 502 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|037200
MRTYMHASHAHHRFLSLPAPTRNFRSAAQGAITTRTDLLQEEVPRGLLSTFSAQPFIMMMECDKAVSAQTSSETP
TTYTTELVIGRAVRKLDRNLLPLMTIFFFLSFLDRTNIGNARVAGLQRDLGLTEKQYQISLTTLFIPYLLSEVPS
TLLLKVIGPNRLFPSLLSIWGLITCLQGFVIGFKGLLGVRFFLGVVEGPVAPAIFLYLSGFYTRSELGLRIAIIF
TATSLTGAFSGFLSAAISFMDGLGGKRGWSWIFIIEGLLTFVIGILSFFLVTPTLAGAKFLAAEEKEAIAIRLQT
DRPIILNGSRFTYKEIKRAIFSPHVVMSILIPFFNASNLYGLSTFIPSIVNSLGFTPVKSQLLAAGPFVCAFFVA
LLSSYISDKYNCRSIPIALNGILTAIGFTIYLCYNREYILYASLYPTLSGIASISPLSMTWASNNSEPHYRRATT
IGLVGVFANSGGVMSMWTYPRSAAPKYQKTNIMNLSFALTVTVIAIINALFLSRRNREKQDPVKRQQILAPYHKS
NAVGLKADNLECELEELSLEANTRAWLDLGDRHPDFKYTL*
Coding >AgabiH97|037200
ATGCGCACATACATGCATGCATCTCATGCGCACCACCGTTTCCTCAGCTTGCCCGCACCGACTCGCAACTTCAGA
TCAGCTGCGCAAGGCGCAATAACGACGAGAACTGATTTGCTTCAGGAGGAAGTCCCTCGTGGTTTACTATCGACA
TTCTCTGCTCAGCCATTCATCATGATGATGGAATGTGACAAAGCCGTGTCTGCGCAAACTTCTTCTGAGACTCCA
ACCACATACACTACAGAACTTGTCATTGGTCGGGCTGTGAGGAAACTGGATCGCAACCTCCTCCCTCTAATGACA
ATATTCTTTTTTCTGTCTTTCCTTGACCGTACGAACATTGGCAATGCTCGTGTAGCGGGACTTCAACGTGACCTT
GGCCTCACAGAAAAACAGTATCAAATCTCCCTCACTACTCTTTTCATACCCTACCTTCTCTCAGAGGTTCCATCC
ACTCTACTTCTCAAAGTGATCGGCCCAAATCGGCTCTTTCCTTCTCTGTTGTCGATCTGGGGTCTCATCACATGC
CTTCAAGGCTTTGTCATCGGTTTTAAAGGGCTCTTGGGTGTCCGCTTCTTTCTTGGGGTTGTCGAGGGGCCGGTG
GCTCCTGCCATCTTTCTCTATCTATCGGGTTTCTACACTCGCTCAGAATTAGGTTTGAGAATTGCTATCATCTTT
ACTGCTACGTCGCTAACTGGTGCTTTTTCTGGATTTCTTTCCGCCGCTATTTCGTTTATGGATGGTCTCGGAGGT
AAACGCGGTTGGTCATGGATCTTTATCATAGAGGGTCTCTTGACTTTTGTCATTGGTATATTGAGTTTCTTTCTC
GTCACACCAACGCTCGCAGGGGCGAAATTTCTCGCAGCTGAGGAAAAAGAGGCTATTGCTATTCGGTTACAAACA
GACCGACCTATAATATTGAATGGAAGTCGATTCACCTACAAAGAGATCAAACGCGCAATTTTCTCACCACACGTA
GTGATGTCAATTCTTATTCCTTTTTTTAACGCTTCGAATCTCTATGGCCTTAGCACTTTCATACCCTCGATCGTC
AATTCTCTCGGATTCACACCTGTCAAATCGCAGCTCTTGGCTGCTGGGCCCTTTGTCTGTGCTTTCTTTGTTGCA
TTACTCTCTTCTTACATATCCGACAAATATAACTGCCGCTCGATTCCTATAGCCTTAAATGGCATCTTAACCGCC
ATCGGATTCACCATATACCTCTGCTATAATCGCGAGTACATACTCTACGCCTCCCTCTATCCAACTCTATCAGGC
ATTGCCTCCATCAGTCCCCTCTCCATGACCTGGGCTTCAAACAATTCTGAACCTCATTATCGTCGAGCCACAACT
ATTGGTCTAGTGGGTGTCTTCGCCAACAGCGGTGGTGTTATGAGTATGTGGACGTATCCAAGATCTGCTGCACCC
AAATATCAAAAAACGAACATCATGAATTTAAGCTTTGCGTTAACAGTTACCGTCATCGCCATCATCAACGCCCTC
TTCCTCTCCCGCCGAAACAGGGAAAAACAAGATCCCGTCAAACGGCAACAGATACTAGCACCTTATCACAAGTCC
AATGCAGTCGGGCTCAAGGCCGATAATTTGGAGTGTGAGCTTGAAGAACTTTCGCTAGAAGCTAATACAAGAGCT
TGGTTGGATCTTGGAGATAGACATCCAGACTTCAAGTACACTCTCTAA
Transcript >AgabiH97|037200
ATGCGCACATACATGCATGCATCTCATGCGCACCACCGTTTCCTCAGCTTGCCCGCACCGACTCGCAACTTCAGA
TCAGCTGCGCAAGGCGCAATAACGACGAGAACTGATTTGCTTCAGGAGGAAGTCCCTCGTGGTTTACTATCGACA
TTCTCTGCTCAGCCATTCATCATGATGATGGAATGTGACAAAGCCGTGTCTGCGCAAACTTCTTCTGAGACTCCA
ACCACATACACTACAGAACTTGTCATTGGTCGGGCTGTGAGGAAACTGGATCGCAACCTCCTCCCTCTAATGACA
ATATTCTTTTTTCTGTCTTTCCTTGACCGTACGAACATTGGCAATGCTCGTGTAGCGGGACTTCAACGTGACCTT
GGCCTCACAGAAAAACAGTATCAAATCTCCCTCACTACTCTTTTCATACCCTACCTTCTCTCAGAGGTTCCATCC
ACTCTACTTCTCAAAGTGATCGGCCCAAATCGGCTCTTTCCTTCTCTGTTGTCGATCTGGGGTCTCATCACATGC
CTTCAAGGCTTTGTCATCGGTTTTAAAGGGCTCTTGGGTGTCCGCTTCTTTCTTGGGGTTGTCGAGGGGCCGGTG
GCTCCTGCCATCTTTCTCTATCTATCGGGTTTCTACACTCGCTCAGAATTAGGTTTGAGAATTGCTATCATCTTT
ACTGCTACGTCGCTAACTGGTGCTTTTTCTGGATTTCTTTCCGCCGCTATTTCGTTTATGGATGGTCTCGGAGGT
AAACGCGGTTGGTCATGGATCTTTATCATAGAGGGTCTCTTGACTTTTGTCATTGGTATATTGAGTTTCTTTCTC
GTCACACCAACGCTCGCAGGGGCGAAATTTCTCGCAGCTGAGGAAAAAGAGGCTATTGCTATTCGGTTACAAACA
GACCGACCTATAATATTGAATGGAAGTCGATTCACCTACAAAGAGATCAAACGCGCAATTTTCTCACCACACGTA
GTGATGTCAATTCTTATTCCTTTTTTTAACGCTTCGAATCTCTATGGCCTTAGCACTTTCATACCCTCGATCGTC
AATTCTCTCGGATTCACACCTGTCAAATCGCAGCTCTTGGCTGCTGGGCCCTTTGTCTGTGCTTTCTTTGTTGCA
TTACTCTCTTCTTACATATCCGACAAATATAACTGCCGCTCGATTCCTATAGCCTTAAATGGCATCTTAACCGCC
ATCGGATTCACCATATACCTCTGCTATAATCGCGAGTACATACTCTACGCCTCCCTCTATCCAACTCTATCAGGC
ATTGCCTCCATCAGTCCCCTCTCCATGACCTGGGCTTCAAACAATTCTGAACCTCATTATCGTCGAGCCACAACT
ATTGGTCTAGTGGGTGTCTTCGCCAACAGCGGTGGTGTTATGAGTATGTGGACGTATCCAAGATCTGCTGCACCC
AAATATCAAAAAACGAACATCATGAATTTAAGCTTTGCGTTAACAGTTACCGTCATCGCCATCATCAACGCCCTC
TTCCTCTCCCGCCGAAACAGGGAAAAACAAGATCCCGTCAAACGGCAACAGATACTAGCACCTTATCACAAGTCC
AATGCAGTCGGGCTCAAGGCCGATAATTTGGAGTGTGAGCTTGAAGAACTTTCGCTAGAAGCTAATACAAGAGCT
TGGTTGGATCTTGGAGATAGACATCCAGACTTCAAGTACACTCTCTAA
Gene >AgabiH97|037200
ATGCGCACATACATGCATGCATCTCATGCGCACCACCGTTTCCTCAGCTTGCCCGGTAGATCATATTGACATACG
ATAGGGTCACTCATCAATTTGCCGTATAGCACCGTGGCTTTAGTCGGCCCCAACCAGTCGGCGGGTAAAGAACGA
GTCTTGAAAGGACTCGCAACTTCAGATCAGCTGCGCAAGGTACGTCTAACTGACTTTGTACAGTGATTTCCCAAA
CGTGTTGTCTCATAAAAATGTAGGCGCAATAACGACGAGAACTGATTTGCTTCAGGAGGTTAACATCATAGTGTA
TAAATGCCCCTTCAGCGAATGCCTGCTTAATGGCAGGAAGTCCCTCGTGGTTTACTATCGACATTCTCTGCTCAG
CCATTCATCATGATGATGGAATGTGACAAAGCCGTGTCTGCGCAAACTTCTTCTGAGACTCCAACCACATACACT
ACAGAACTTGTCATTGGTCGGGCTGTGAGGAAACTGGATCGCAACCTCCTCCCTCTAATGACAATATTCTTTTTT
CTGTCTTTCCTTGTATGTATTCCAGCCATCGCACCACCCTTCAAACTGATACGTATGATATAGGACCGTACGAAC
ATTGGTATAGTCATGACGAACTTTTTGACCCCCTCGCGTTGATAATTATTGACAGGCAATGCTCGTGTAGCGGGA
CTTCAACGTGACCTTGGCCTCACAGAAAAACAGTATCAAATCTCCCTCACTACTCTTTTCATACCCTACCTTCTC
TCAGAGGTTCCATCCACTCTACTTCTCAAAGTGATCGGCCCAAATCGGCTCTTTCCTTCTCTGTTGTCGATCTGG
GGTCTCATCACATGCCTTCAAGGTTAAGTGAGAGAAAAAAGTAACGTCCCACTTATACTGATTCCTTTTCTCCCT
ATAGGCTTTGTCATCGGTTTTAAAGGGCTCTTGGGTGTCCGCTTCTTTCTTGGGGTTGTCGAGGGGCCGGTGGCT
CCTGCCATCTTTCTCTATCTATCGGGTTTCTACACTCGCTCAGAATTAGGTTTGAGGTACGTTCCTAAGGACTTC
GTTCTTGTACTTTTCTAAACTCATGCTAGAATTGCTATCATCTTTACTGCTACGTCGGTGAGGATGACTAGTCGC
CATTTCTTTTCTCTTTGGAGGGTATACTGAACTGCGTGTAGCTAACTGGTGCTTTTTCTGGATTTCTTTCCGCCG
CTATTTCGTTTATGGATGGTCTCGGAGGTAAACGCGGTTGGTCATGGATCTTTATCATAGTAAGTCATCTTCCTT
TTACGTCAATCATTGTCAACAACACTCTATTTGAAACTGCAGGAGGGTCTCTTGACTTTTGTCATTGGTATATTG
AGTTTCTTTCTCGTCACACCAACGCTCGCAGGGGCGAAATTTCTCGCAGCTGAGGAAAAAGAGTACGTACTAATA
ACAGTAGTAGTTGATTTCTTTCTTTCCCAAAATTCCTGAAGAAGCTACACTTGCCAGGGCTATTGCTATTCGGTT
ACAAACAGACCGACCTATAATATTGAATGGAAGTCGATTCACCTACAAAGAGATCAAACGCGCAATTTTCTCACC
ACACGTAGTGATGTCAATTCTTATTCCTTTTTTTAACGCTTCGAATCTCTATGGCCTTAGCACTTTCATACCCTC
GATCGTCAATTCTCTCGGATTCACACCTGTCAAATCGCAGCTCTTGGCTGCTGGGCCCTTTGTCTGTGCTTTCTT
TGGTAAGTAAAGGAACTACTTCTAACGTCTTTTTGTTATCCCTCGATTATGGATCTCTGACTTTTTGATTTTTTA
TTGTTGTTGTGATAGTTGCATTACTCTCTTCTTACATATCCGACAAATATAACTGCCGCTCGATTCCTATAGCCT
TAAATGGCATCTTAACCGCCATCGGATTCACCATATACCTCTGTGAGCAACAGCATAATTAAACCATATATATAC
ACTAACAAAAAGAATAAACTATCTCCACTTAGGCTATAATCGCGAGTACATACTCTACGCCTCCCTCTATCCAAC
TCTATCAGGCATTGCCTCCATCAGTCCCCTCTCCATGACCTGGGCTTCAAACAATTCTGAACCTCATTATCGTCG
AGCCACAACTATTGGTCTAGTGGGTGTCTTCGCCAACAGCGTGAGTGTTTTCATTGATTCATTAATTCATTGCTT
TCTTTTTATCTTTCTCCTTTTCAACCTTATCTCGACGACATTCTTCGTCTTAATCTTAATTTTTTTTTTGCTTTG
TACTTAGGGTGGTGTTATGAGTATGTGGACGTATCCAAGATCTGCTGCACCCAAATATCAAAAAACGAACATCAT
GAATTTAAGCTTGTACGTTTATTTCCCCCCCTCTTAATGTATTATCTCTCCCTCAAAAACAAAAACCATCAGTGC
GTTAACAGTTACCGTCATCGCCATCATCAACGCCCTCTTCCTCTCCCGCCGAAACAGGGAAAAACAAGATCCCGT
CAAACGGCAACAGATACTAGCACCTTATCACAAGTCCAATGCAGTCGGGCTCAAGGCCGATAATTTGGAGTGTGA
GCTTGAAGAACTTTCGCTAGAAGCTAATACAAGAGCTTGGTTGGATCTTGGAGATAGACATCCAGACTTCAAGTA
CACTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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