Fungal Genomics

Agaricus bisporus var bisporus H39 Agaricus bisporus var bisporus H97 Agaricus bisporus var burnettii H119p4 Aspergillus niger CBS 112.32 Aspergillus niger CBS 113.50 Aspergillus niger CBS 115988 Aspergillus niger CBS 115989 Aspergillus niger CBS 118.52 Aspergillus niger CBS 124.48 Aspergillus niger CBS 131.52 Aspergillus niger CBS 133816 Aspergillus niger CBS 147320 Aspergillus niger CBS 147321 Aspergillus niger CBS 147322 Aspergillus niger CBS 147323 Aspergillus niger CBS 147324 Aspergillus niger CBS 147343 Aspergillus niger CBS 147344 Aspergillus niger CBS 147345 Aspergillus niger CBS 147346 Aspergillus niger CBS 147347 Aspergillus niger CBS 147352 Aspergillus niger CBS 147353 Aspergillus niger CBS 147371 Aspergillus niger CBS 147482 Aspergillus niger CBS 630.78 Aspergillus niger CBS 769.97 Niveomyces coronatus CBS 149186 Ophiocordyceps australis 1348a (Ghana) Ophiocordyceps australis map64 (Brazil) Ophiocordyceps camponoti-floridani Ophiocordyceps camponoti-rufipedis Ophiocordyceps kimflemingae Ophiocordyceps subramaniannii Penicillium roqueforti DTO002I6 Penicillium roqueforti DTO003C3 Penicillium roqueforti DTO003H1 (CBS 147308) Penicillium roqueforti DTO006G1 Penicillium roqueforti DTO006G7 Penicillium roqueforti DTO012A1 Penicillium roqueforti DTO012A2 (CBS 147309) Penicillium roqueforti DTO012A6 (CBS 147310) Penicillium roqueforti DTO012A7 Penicillium roqueforti DTO012A8 Penicillium roqueforti DTO012A9 Penicillium roqueforti DTO013E5 Penicillium roqueforti DTO013F2 Penicillium roqueforti DTO013F5 (CBS 147311) Penicillium roqueforti DTO027I6 Penicillium roqueforti DTO032C6 Penicillium roqueforti DTO039G3 Penicillium roqueforti DTO046C5 Penicillium roqueforti DTO070G2 (CBS 147317) Penicillium roqueforti DTO081F9 (CBS 147318) Penicillium roqueforti DTO101D6 (CBS 147325) Penicillium roqueforti DTO102I9 (CBS 147326) Penicillium roqueforti DTO126G2 (CBS 147330) Penicillium roqueforti DTO127F7 (CBS 147331) Penicillium roqueforti DTO127F9 (CBS 147332) Penicillium roqueforti DTO130C1 (CBS 147333) Penicillium roqueforti DTO163C3 (CBS 147337) Penicillium roqueforti DTO163F5 (CBS 147338) Penicillium roqueforti DTO163G4 (CBS 147339) Penicillium roqueforti DTO265D5 (CBS 147372) Penicillium roqueforti DTO369A1 (CBS 147354) Penicillium roqueforti DTO375B1 (CBS 147355) Penicillium roqueforti DTO377G2 (LCP 96.3914a) Penicillium roqueforti LCP96 04111 Rhodonia placenta FPRL280 Torrubiellomyces zombiae CBS 149187

General Properties

Protein ID	AgabiH97|037050
Gene name
Location	scaffold_13:927257..929363
Strand	-
Gene length (bp)	2106
Transcript length (bp)	1716
Coding sequence length (bp)	1716
Protein length (aa)	572

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00790	VHS	VHS domain	1.6E-07	95	192

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q4P7Q1|VPS27_USTMA	Vacuolar protein sorting-associated protein 27 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=VPS27 PE=3 SV=1	76	216	9.0E-06

GO

GO Term	Description	Terminal node
GO:0043130	ubiquitin binding	Yes
GO:0035091	phosphatidylinositol binding	Yes
GO:0008289	lipid binding	No
GO:0003674	molecular_function	No
GO:0005488	binding	No
GO:0005543	phospholipid binding	No
GO:0005515	protein binding	No
GO:0032182	ubiquitin-like protein binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 59	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|037050 MRRLFKAKTLKPKDDPIPTPIYLQHASQPVAPRILSALDAPPAPILDASEDGLSSLDMPLHRKTFWSRDRSNDHH DPLTADLTKMIAYLTATGCQDSSLVSDVCYRASQNDASAKEAIRVLRREFKYGEPPGQLSAARLWAVMLHNCSDI FIFHSTSRKFLDTVHDLLTNPKTSPVVRERLLDVIAAAAFATQSKKNDRDGFRALWRRVKPADKPDEGMPLSDDD TMLNPPLPHRTSPSAISTPEPPFQSLPPSPQIPPPLRHKNRKSPTRNRIIPHEEDVKRLLQECKIGQGNATLLSQ ALFHAKLESFKKDTVIREFYRKCRASHELLVTQIPWATAEAEKSIIAKEQESSTKEEHLLASILAAHGELVEVLN QYEDLSRVALERKVEHRSLREVRMEVLEPPIYGDRRSRSSSLSARTPSPQLQRNRTESVTGSLAPPPSAPCGPRS PNHFPPARTPSPQPPPTSPPSNESEEELDAPRQLSAKALGKQRAVEIDSSDPYQQQQQPDTNDSYYDVSTERRNS HSFDESDREDPQNDIPWHRPTHYVYDAAAERNAQRERQTRLVNGVH*
Coding	>AgabiH97|037050 ATGCGCAGGCTGTTCAAGGCCAAGACGCTCAAACCGAAAGACGACCCGATCCCCACCCCGATCTACCTCCAGCAC GCCTCTCAGCCCGTCGCACCCCGCATCCTCAGCGCTCTCGACGCACCCCCCGCTCCCATCCTCGACGCTTCCGAA GACGGTCTTTCGTCGCTCGACATGCCTCTTCACAGAAAGACCTTTTGGTCAAGAGACCGCTCCAACGACCACCAC GACCCCCTCACTGCAGACCTCACCAAGATGATCGCCTATCTCACCGCAACAGGCTGCCAGGACTCGTCGCTCGTC TCCGATGTCTGCTACCGCGCCTCCCAGAACGACGCCTCTGCCAAAGAGGCCATCAGAGTCCTCAGACGCGAATTC AAGTACGGCGAACCTCCCGGCCAACTCTCTGCCGCACGACTCTGGGCTGTCATGCTACACAACTGCTCAGATATC TTCATCTTTCACTCAACCAGTCGTAAATTCCTAGACACAGTCCACGACCTCTTGACCAACCCAAAGACCTCTCCC GTCGTCCGAGAGCGCCTTCTCGACGTCATTGCCGCCGCTGCATTCGCCACCCAGTCCAAAAAGAATGACCGCGAC GGTTTTCGCGCTCTCTGGCGCCGCGTCAAGCCCGCGGATAAGCCCGATGAGGGCATGCCTCTTTCAGACGACGAC ACCATGCTAAATCCGCCTCTTCCCCATCGAACATCTCCCTCTGCCATATCCACTCCAGAGCCTCCATTTCAAAGT CTACCTCCCTCTCCTCAAATTCCCCCACCCCTCCGCCACAAGAATCGCAAATCCCCGACACGAAACCGCATTATA CCCCATGAAGAAGACGTGAAACGTTTGCTTCAGGAATGCAAAATTGGCCAAGGAAACGCAACTCTTCTTTCCCAA GCTCTTTTCCATGCTAAACTAGAATCGTTCAAGAAGGATACCGTTATTCGCGAATTCTACCGCAAATGCCGAGCT TCCCACGAGCTTCTCGTCACTCAAATCCCTTGGGCTACTGCTGAAGCTGAAAAATCCATTATCGCCAAAGAACAA GAGTCTTCCACAAAAGAAGAACACCTTCTTGCATCCATCCTCGCCGCTCACGGCGAACTTGTCGAAGTTCTTAAC CAATATGAAGATCTCAGTCGAGTCGCTCTCGAACGTAAAGTCGAGCATCGCAGTCTCAGAGAAGTCAGAATGGAA GTGTTGGAACCACCTATATATGGTGATCGTCGGTCGAGAAGTTCTTCTTTATCTGCACGTACTCCATCACCTCAA TTACAACGGAATCGCACGGAAAGCGTGACAGGTTCTCTTGCTCCACCGCCTTCGGCTCCTTGTGGTCCTCGTTCT CCGAATCATTTTCCACCTGCTCGTACTCCGTCACCTCAACCGCCACCAACAAGTCCACCATCGAATGAGAGTGAG GAGGAATTGGATGCACCACGTCAACTCAGTGCGAAAGCACTAGGAAAACAAAGGGCGGTTGAAATCGATTCATCA GATCCTTATCAACAACAACAACAGCCTGATACCAACGACAGTTATTACGACGTTTCTACGGAGAGACGCAATTCG CATTCGTTTGACGAATCAGACCGTGAAGACCCTCAGAATGATATTCCATGGCATAGACCCACCCATTATGTTTAC GACGCTGCGGCAGAACGAAATGCTCAACGAGAACGCCAAACACGACTGGTCAATGGCGTGCATTAA
Transcript	>AgabiH97|037050 ATGCGCAGGCTGTTCAAGGCCAAGACGCTCAAACCGAAAGACGACCCGATCCCCACCCCGATCTACCTCCAGCAC GCCTCTCAGCCCGTCGCACCCCGCATCCTCAGCGCTCTCGACGCACCCCCCGCTCCCATCCTCGACGCTTCCGAA GACGGTCTTTCGTCGCTCGACATGCCTCTTCACAGAAAGACCTTTTGGTCAAGAGACCGCTCCAACGACCACCAC GACCCCCTCACTGCAGACCTCACCAAGATGATCGCCTATCTCACCGCAACAGGCTGCCAGGACTCGTCGCTCGTC TCCGATGTCTGCTACCGCGCCTCCCAGAACGACGCCTCTGCCAAAGAGGCCATCAGAGTCCTCAGACGCGAATTC AAGTACGGCGAACCTCCCGGCCAACTCTCTGCCGCACGACTCTGGGCTGTCATGCTACACAACTGCTCAGATATC TTCATCTTTCACTCAACCAGTCGTAAATTCCTAGACACAGTCCACGACCTCTTGACCAACCCAAAGACCTCTCCC GTCGTCCGAGAGCGCCTTCTCGACGTCATTGCCGCCGCTGCATTCGCCACCCAGTCCAAAAAGAATGACCGCGAC GGTTTTCGCGCTCTCTGGCGCCGCGTCAAGCCCGCGGATAAGCCCGATGAGGGCATGCCTCTTTCAGACGACGAC ACCATGCTAAATCCGCCTCTTCCCCATCGAACATCTCCCTCTGCCATATCCACTCCAGAGCCTCCATTTCAAAGT CTACCTCCCTCTCCTCAAATTCCCCCACCCCTCCGCCACAAGAATCGCAAATCCCCGACACGAAACCGCATTATA CCCCATGAAGAAGACGTGAAACGTTTGCTTCAGGAATGCAAAATTGGCCAAGGAAACGCAACTCTTCTTTCCCAA GCTCTTTTCCATGCTAAACTAGAATCGTTCAAGAAGGATACCGTTATTCGCGAATTCTACCGCAAATGCCGAGCT TCCCACGAGCTTCTCGTCACTCAAATCCCTTGGGCTACTGCTGAAGCTGAAAAATCCATTATCGCCAAAGAACAA GAGTCTTCCACAAAAGAAGAACACCTTCTTGCATCCATCCTCGCCGCTCACGGCGAACTTGTCGAAGTTCTTAAC CAATATGAAGATCTCAGTCGAGTCGCTCTCGAACGTAAAGTCGAGCATCGCAGTCTCAGAGAAGTCAGAATGGAA GTGTTGGAACCACCTATATATGGTGATCGTCGGTCGAGAAGTTCTTCTTTATCTGCACGTACTCCATCACCTCAA TTACAACGGAATCGCACGGAAAGCGTGACAGGTTCTCTTGCTCCACCGCCTTCGGCTCCTTGTGGTCCTCGTTCT CCGAATCATTTTCCACCTGCTCGTACTCCGTCACCTCAACCGCCACCAACAAGTCCACCATCGAATGAGAGTGAG GAGGAATTGGATGCACCACGTCAACTCAGTGCGAAAGCACTAGGAAAACAAAGGGCGGTTGAAATCGATTCATCA GATCCTTATCAACAACAACAACAGCCTGATACCAACGACAGTTATTACGACGTTTCTACGGAGAGACGCAATTCG CATTCGTTTGACGAATCAGACCGTGAAGACCCTCAGAATGATATTCCATGGCATAGACCCACCCATTATGTTTAC GACGCTGCGGCAGAACGAAATGCTCAACGAGAACGCCAAACACGACTGGTCAATGGCGTGCATTAA
Gene	>AgabiH97|037050 ATGCGCAGGCTGTTCAAGGCCAAGACGCTCAAACCGAAAGACGACCCGATCCCCACCCCGATCTACCTCCAGCAC GCCTCTCAGCCCGTCGCACCCCGCATCCTCAGCGCTCTCGACGCACCCCCCGCTCCCATCCTCGACGCTTCCGAA GACGGTCTTTCGTCGCTCGACATGCCTCTTCACAGAAAGACCTTTTGGTCAAGAGACCGCTCCAACGACCACCAC GACCCCCTCACTGCAGACCTCACCAAGATGATCGGTAATTCATCCGTCTTCTCTGCGGCGTCTGCTCATCACTTT CACAGCCTATCTCACCGCAACAGGCTGCCAGGACTCGTCGCTCGTCTCCGATGTCTGCTACCGCGCCTCCCAGAA CGACGCCTCTGCCAAAGAGGCCATCAGAGTCCTCAGACGCGAATTCAAGTATGTTATTTTCTCACCTCTCTCCTT CCTCTCCTCATCCATCGCAGGTACGGCGAACCTCCCGGCCAACTCTCTGCCGCACGAGTCTGTCCTTTCCATTCC CTTGTTATCTCCCACTCATTCTATTTGCAGCTCTGGGCTGTCATGCTACACAACTGCTCAGATATCTTCATCTTT CACTCAACCAGTCGTAAATTCCTAGACACAGTCCACGACCTCTTGACCAACCCAAAGACCTCTCCCGTCGTCCGA GAGCGCCTTCTCGACGTCATTGCCGCCGCTGCATTCGCCACCCAGTCCAGTTCGTGCCCTTTACCCATCTCACCC CCCATCTCACCTCTTTTCTAGAAAAGAATGACCGCGACGGTTTTCGCGCTCTCTGGCGCCGCGTCAAGCCCGCGG ATAAGCCCGATGAGGTCCGCCTTTCTCTTTCTCTTTCCATACCAACTCTTCATAACCCCATACAAGGGCATGCCT CTTTCAGACGACGACACCATGCTAAATCCGCCTCTTCCCCATCGAACATCTCCCTCTGCCATATCCACTCCAGAG CCTCCATTTCAAAGTCTACCTCCCTCTCCTCAAATTCCCCCACCCGTTCGTTCATGTCCTTCTTTCCCTGATGCG TTTTGACTCGCGTTTCAGCTCCGCCACAAGAATCGCAAATCCCCGACACGAAACCGCATTATACCCCATGAAGAA GACGTGAAACGTTTGCTTCAGGAATGCAAAATTGGCCAAGGAAACGCAACTCTTCTTTCCCAAGCTCTTTTCCAT GCTAAACTAGAATCGTTCAAGAAGGATACCGTTATTCGCGTCAGTACTCTCTCATATCCCCGTGACAATTTTTTG ATTGTAAAACAGGAATTCTACCGCAAATGCCGAGCTTCCCACGAGCTTCTCGTCACTCAAATCCCTTGGGCTACT GCTGAAGCTGAAAAATCCATTATCGCCAAAGAACAAGAGTCTTCCACAAAAGAAGAACACCTTCTTGCATCCATC CTCGCCGCTCACGGCGAACTTGTCGAAGTTCTTAACCAATATGAAGATCTCAGTCGAGTCGCTCTCGAACGTAAA GTCGAGCATCGCAGTCTCAGAGAAGTCAGAATGGAAGTGTTGGAACCACCTATATATGGTGATCGTCGGTCGAGA AGTTCTTCTTTATCTGCACGTACTCCATCACCTCAATTACAACGGAATCGCACGGAAAGCGTGACAGGTTCTCTT GCTCCACCGCCTTCGGCTCCTTGTGGTCCTCGTTCTCCGAATCATTTTCCACCTGCTCGTACTCCGTCACCTCAA CCGCCACCAACAAGTCCACCATCGAATGAGAGTGAGGAGGAATTGGATGCACCACGTCAACTCAGTGCGAAAGCA CTAGGAAAACAAAGGGCGGTTGAAATCGATTCATCAGATCGTAGGTGTCTTTATAGGCATGTTTGAATAAAATAA ATAACACACTCTTTTATAGCTTATCAACAACAACAACAGCCTGATACCAACGACAGTTATTACGACGTTTCTACG GAGAGACGCAATTCGCATTCGTTTGACGAATCAGACCGTGAAGACCCTCAGAATGATATTCCATGGCATAGACCC ACCCATTATGTTTACGACGCTGCGGCAGAACGAAATGCTCAACGAGAACGCCAAACACGACTGGTCAATGGCGTG CATTAA