Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|036360
Gene name
Locationscaffold_13:737631..738288
Strand-
Gene length (bp)657
Transcript length (bp)504
Coding sequence length (bp)504
Protein length (aa) 168

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 138 160 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|036360
MLAFAAFFFLLAGRVFAEFSITLGQQVLFPPDFLAIPSSLVPSECGANCAAANQSIIGCNNNAACLCQSSVVDSL
RGCQQCMFTQVIAKNEKVLDLRVGSSPLMTGYSTACLADGNVTLAANETALVLPASWDGPLDVILSTGGTVVAVG
VGGVLGLAAIMLLSNMN*
Coding >AgabiH97|036360
ATGCTCGCTTTTGCTGCTTTCTTTTTCTTGCTCGCTGGTCGAGTCTTTGCTGAATTCAGTATTACCTTGGGACAG
CAGGTCTTGTTCCCCCCTGACTTCCTTGCTATACCATCAAGCCTGGTTCCGTCGGAGTGTGGCGCTAACTGTGCG
GCCGCCAATCAGAGCATTATTGGTTGCAACAACAATGCGGCCTGTCTCTGTCAGAGTAGCGTCGTCGATAGTCTG
CGGGGGTGTCAACAGTGCATGTTTACGCAGGTTATAGCGAAGAATGAGAAGGTGTTGGACCTGCGGGTCGGCTCC
AGCCCGCTCATGACCGGATATTCGACGGCTTGCCTGGCCGACGGGAATGTGACATTGGCTGCGAACGAGACTGCG
CTGGTGCTGCCGGCGTCGTGGGATGGGCCGCTGGATGTTATTCTGTCGACGGGCGGCACTGTGGTCGCTGTCGGG
GTGGGCGGGGTGCTTGGGCTCGCTGCGATAATGTTGTTGAGCAACATGAATTAG
Transcript >AgabiH97|036360
ATGCTCGCTTTTGCTGCTTTCTTTTTCTTGCTCGCTGGTCGAGTCTTTGCTGAATTCAGTATTACCTTGGGACAG
CAGGTCTTGTTCCCCCCTGACTTCCTTGCTATACCATCAAGCCTGGTTCCGTCGGAGTGTGGCGCTAACTGTGCG
GCCGCCAATCAGAGCATTATTGGTTGCAACAACAATGCGGCCTGTCTCTGTCAGAGTAGCGTCGTCGATAGTCTG
CGGGGGTGTCAACAGTGCATGTTTACGCAGGTTATAGCGAAGAATGAGAAGGTGTTGGACCTGCGGGTCGGCTCC
AGCCCGCTCATGACCGGATATTCGACGGCTTGCCTGGCCGACGGGAATGTGACATTGGCTGCGAACGAGACTGCG
CTGGTGCTGCCGGCGTCGTGGGATGGGCCGCTGGATGTTATTCTGTCGACGGGCGGCACTGTGGTCGCTGTCGGG
GTGGGCGGGGTGCTTGGGCTCGCTGCGATAATGTTGTTGAGCAACATGAATTAG
Gene >AgabiH97|036360
ATGCTCGCTTTTGCTGCTTTCTTTTTCTTGCTCGCTGGTCGAGGTGCGTGCGCAGTCCATGTCTTTTGCTCGCTC
ACCGAGTCGTGTTGCAGTCTTTGCTGAATTCAGTATTACCTTGGGACAGCAGGTCTTGTTCCCCCCTGACTTCCT
TGCTATACCATCAAGCCTGGTTCCGTCGGAGGTGAGTTCCTGCCACATGTTACAATTTTTATTGCTGATAATAGG
TGCACTAGTGTGGCGCTAACTGTGCGGCCGCCAATCAGAGCATTATTGGTTGCAACAACAATGCGGCCTGTCTCT
GTCAGAGTAGCGTCGTCGATAGTCTGCGGGGGTGTCAACAGTGCATGTTTACGCAGGTTATAGCGAAGAATGAGA
AGGTGTTGGACCTGCGGGTCGGCTCCAGCCCGCTCATGACCGGTGAGTAAACCTTTACTCGTTGTGATGATGAGG
GTTGAGATGCTGTGCACAGGATATTCGACGGCTTGCCTGGCCGACGGGAATGTGACATTGGCTGCGAACGAGACT
GCGCTGGTGCTGCCGGCGTCGTGGGATGGGCCGCTGGATGTTATTCTGTCGACGGGCGGCACTGTGGTCGCTGTC
GGGGTGGGCGGGGTGCTTGGGCTCGCTGCGATAATGTTGTTGAGCAACATGAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail