Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|035970
Gene name
Location	scaffold_13:631250..632237
Strand	+
Gene length (bp)	987
Transcript length (bp)	801
Coding sequence length (bp)	801
Protein length (aa)	267

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	2.3E-09	27	122

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 70	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|035970 MDDAPSPQNSTPTRVESFYFDDDPMAIFLVEDKLFKVHRHFFIEGSKIFRDMFSQASCLEEAEGMSDDKPIVLPN VTVKEFKSLLRFFYAMKSPIPTKKLLVDVLAFKQDEKLALLRIAHKFVFDDVFEYICGEFEPGSFPVADRVCVGD KYGLKNWLSSAYKTILERTPDQKLSLEEADALGLKRTVRVLEAKNSILHEARVDDLKNVQSTMASRCKKKYRYDS EDDDMAVPMTLSCSCCTQQMNDISVGNMENAVARAVENLLS*
Coding	>AgabiH97\|035970 ATGGATGACGCTCCTTCCCCCCAAAACTCAACTCCTACTCGTGTTGAATCCTTTTATTTCGATGATGATCCTATG GCTATCTTTCTTGTTGAAGATAAACTGTTCAAAGTCCATCGTCACTTTTTCATCGAGGGTTCCAAGATCTTTCGG GATATGTTTTCTCAGGCCAGCTGTCTTGAAGAAGCGGAAGGAATGTCTGACGACAAGCCGATCGTATTACCGAAT GTGACTGTCAAAGAATTCAAATCTCTTTTACGTTTTTTCTATGCAATGAAATCACCCATACCCACCAAAAAGCTA CTCGTCGACGTTCTTGCTTTTAAGCAAGACGAGAAGCTCGCTCTCCTCAGGATTGCTCATAAATTTGTCTTTGAC GACGTTTTTGAGTACATCTGTGGAGAGTTTGAACCCGGATCGTTTCCGGTGGCAGACAGGGTGTGCGTGGGTGAT AAGTACGGTCTCAAAAATTGGCTCTCTTCAGCGTATAAAACCATCTTGGAACGTACTCCGGACCAAAAGCTGTCC CTTGAAGAAGCCGATGCGTTGGGTCTCAAAAGGACCGTCAGGGTCCTTGAAGCGAAAAATTCCATATTGCATGAA GCTCGTGTTGACGACCTGAAGAACGTTCAGTCGACCATGGCGTCTCGCTGTAAAAAAAAATATCGATACGACTCC GAGGATGATGACATGGCAGTGCCAATGACTCTGTCATGCTCATGTTGCACTCAACAGATGAACGACATTAGCGTA GGAAATATGGAGAATGCTGTTGCTCGAGCGGTAGAGAATCTTTTGTCGTAA
Transcript	>AgabiH97\|035970 ATGGATGACGCTCCTTCCCCCCAAAACTCAACTCCTACTCGTGTTGAATCCTTTTATTTCGATGATGATCCTATG GCTATCTTTCTTGTTGAAGATAAACTGTTCAAAGTCCATCGTCACTTTTTCATCGAGGGTTCCAAGATCTTTCGG GATATGTTTTCTCAGGCCAGCTGTCTTGAAGAAGCGGAAGGAATGTCTGACGACAAGCCGATCGTATTACCGAAT GTGACTGTCAAAGAATTCAAATCTCTTTTACGTTTTTTCTATGCAATGAAATCACCCATACCCACCAAAAAGCTA CTCGTCGACGTTCTTGCTTTTAAGCAAGACGAGAAGCTCGCTCTCCTCAGGATTGCTCATAAATTTGTCTTTGAC GACGTTTTTGAGTACATCTGTGGAGAGTTTGAACCCGGATCGTTTCCGGTGGCAGACAGGGTGTGCGTGGGTGAT AAGTACGGTCTCAAAAATTGGCTCTCTTCAGCGTATAAAACCATCTTGGAACGTACTCCGGACCAAAAGCTGTCC CTTGAAGAAGCCGATGCGTTGGGTCTCAAAAGGACCGTCAGGGTCCTTGAAGCGAAAAATTCCATATTGCATGAA GCTCGTGTTGACGACCTGAAGAACGTTCAGTCGACCATGGCGTCTCGCTGTAAAAAAAAATATCGATACGACTCC GAGGATGATGACATGGCAGTGCCAATGACTCTGTCATGCTCATGTTGCACTCAACAGATGAACGACATTAGCGTA GGAAATATGGAGAATGCTGTTGCTCGAGCGGTAGAGAATCTTTTGTCGTAA
Gene	>AgabiH97\|035970 ATGGATGACGCTCCTTCGTAAGACCGGTTTATGGACTATATGAACAAGCAGAAAACTGACATTCATAATTGAGCC CCCAAAACTCAACTCCTACTCGTGTTGAATCCTTTTATTTCGATGATGATCCTATGGCTATCTTTCTTGTGAGTC GTGTGTACTAGCCAATTACTAAAGGTGGAATGAGCTTGACTGACTATATGATGTAGGTTGAAGATAAACTGTTCA AAGTCCATCGTCACTTTTTCATCGAGGGTTCCAAGATCTTTCGGGATATGTTTTCTCAGGCCAGCTGTCTTGAAG AAGCGGAAGGAATGTCTGACGACAAGCCGATCGTATTACCGAATGTGACTGTCAAAGAATTCAAATCTCTTTTAC GTTTTTTCTATGCAATGTGAATGTTTTTGATTTTATTCTCGAAAATATTATATTTCATCTCACATTATCTATGAT CCAAATAGGAAATCACCCATACCCACCAAAAAGCTACTCGTCGACGTTCTTGCTTTTAAGCAAGACGAGAAGCTC GCTCTCCTCAGGATTGCTCATAAATTTGTCTTTGACGACGTTTTTGAGTACATCTGTGGAGAGTTTGAACCCGGA TCGTTTCCGGTGGCAGACAGGGTGTGCGTGGGTGATAAGTACGGTCTCAAAAATTGGCTCTCTTCAGCGTATAAA ACCATCTTGGAACGTACTCCGGACCAAAAGCTGTCCCTTGAAGAAGCCGATGCGTTGGGTCTCAAAAGGACCGTC AGGGTCCTTGAAGCGAAAAATTCCATATTGCATGAAGCTCGTGTTGACGACCTGAAGAACGTTCAGTCGACCATG GCGTCTCGCTGTAAAAAAAAATATCGATACGACTCCGAGGATGATGACATGGCAGTGCCAATGACTCTGTCATGC TCATGTTGCACTCAACAGATGAACGACATTAGCGTAGGAAATATGGAGAATGCTGTTGCTCGAGCGGTAGAGAAT CTTTTGTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail