Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|034860
Gene name
Locationscaffold_13:337703..338623
Strand+
Gene length (bp)920
Transcript length (bp)867
Coding sequence length (bp)867
Protein length (aa) 289

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|034860
MKAWVLISLFATLASAQSASSSSSAASPEASSYIPDGISSGCKDFLSSLDSDSSLTSCTDSLLKSTANFGSDGSH
TKAEVTGAIDAVCNGPVSSACPDSLIRGKLADFYSACSAELTSNPNKQVRGLYDVLYILMPMKSAICSKDDSGNY
CVFSGTGANSTANLPAATDNGLDLSTLGSSNLAFLFRTANMDSTSLCTTCTRNIISGYFSYESDTLYSPGISNSE
MLGGQTPLVSAIEKQCGANFLSGAVQAAGGIQSGFGSSGAAQDKVSGVVVALVGALTVAISAL*
Coding >AgabiH97|034860
ATGAAGGCCTGGGTTTTGATCTCTCTTTTTGCAACTCTTGCATCTGCGCAATCGGCATCTTCGAGCTCGAGTGCT
GCTTCTCCAGAGGCATCTTCTTATATTCCAGATGGCATCAGCTCTGGATGCAAGGATTTTCTCTCATCTTTGGAC
TCCGATTCCTCCCTCACATCATGCACGGACTCATTACTCAAATCCACTGCAAACTTCGGCTCTGACGGATCGCAC
ACAAAGGCAGAGGTCACTGGAGCCATCGACGCCGTTTGCAATGGCCCAGTTTCCTCGGCGTGCCCCGACAGTCTC
ATCCGCGGAAAACTTGCGGACTTTTACTCAGCTTGTTCCGCCGAGCTCACCTCGAATCCCAACAAACAAGTTCGC
GGCCTTTATGATGTCTTATACATCCTCATGCCCATGAAGTCTGCCATCTGCTCGAAAGACGATAGCGGCAACTAC
TGTGTCTTCTCTGGCACTGGTGCCAATTCCACCGCTAATCTTCCTGCTGCAACCGACAATGGTCTCGACCTCTCA
ACCTTGGGCTCCAGCAACCTTGCATTCCTATTCCGTACGGCCAACATGGATAGCACGTCGTTGTGCACTACTTGC
ACTCGTAACATCATATCGGGATATTTCAGCTATGAGTCTGATACCCTTTACTCCCCTGGCATCAGCAACAGCGAA
ATGCTTGGTGGTCAGACCCCGCTTGTCAGCGCAATTGAAAAGCAGTGCGGTGCCAACTTCCTGAGTGGTGCTGTT
CAAGCCGCTGGTGGTATTCAATCAGGCTTCGGCTCCTCTGGAGCTGCTCAAGATAAGGTTTCAGGGGTCGTTGTC
GCCCTGGTAGGCGCTTTGACCGTCGCCATCTCTGCCCTTTAA
Transcript >AgabiH97|034860
ATGAAGGCCTGGGTTTTGATCTCTCTTTTTGCAACTCTTGCATCTGCGCAATCGGCATCTTCGAGCTCGAGTGCT
GCTTCTCCAGAGGCATCTTCTTATATTCCAGATGGCATCAGCTCTGGATGCAAGGATTTTCTCTCATCTTTGGAC
TCCGATTCCTCCCTCACATCATGCACGGACTCATTACTCAAATCCACTGCAAACTTCGGCTCTGACGGATCGCAC
ACAAAGGCAGAGGTCACTGGAGCCATCGACGCCGTTTGCAATGGCCCAGTTTCCTCGGCGTGCCCCGACAGTCTC
ATCCGCGGAAAACTTGCGGACTTTTACTCAGCTTGTTCCGCCGAGCTCACCTCGAATCCCAACAAACAAGTTCGC
GGCCTTTATGATGTCTTATACATCCTCATGCCCATGAAGTCTGCCATCTGCTCGAAAGACGATAGCGGCAACTAC
TGTGTCTTCTCTGGCACTGGTGCCAATTCCACCGCTAATCTTCCTGCTGCAACCGACAATGGTCTCGACCTCTCA
ACCTTGGGCTCCAGCAACCTTGCATTCCTATTCCGTACGGCCAACATGGATAGCACGTCGTTGTGCACTACTTGC
ACTCGTAACATCATATCGGGATATTTCAGCTATGAGTCTGATACCCTTTACTCCCCTGGCATCAGCAACAGCGAA
ATGCTTGGTGGTCAGACCCCGCTTGTCAGCGCAATTGAAAAGCAGTGCGGTGCCAACTTCCTGAGTGGTGCTGTT
CAAGCCGCTGGTGGTATTCAATCAGGCTTCGGCTCCTCTGGAGCTGCTCAAGATAAGGTTTCAGGGGTCGTTGTC
GCCCTGGTAGGCGCTTTGACCGTCGCCATCTCTGCCCTTTAA
Gene >AgabiH97|034860
ATGAAGGCCTGGGTTTTGATCTCTCTTTTTGCAACTCTTGCATCTGCGCAATCGGTGGGTTGTTTCGGGTTTTCA
GTTTTCATCGTTGATACTCATCGACGTCAAAGGCATCTTCGAGCTCGAGTGCTGCTTCTCCAGAGGCATCTTCTT
ATATTCCAGATGGCATCAGCTCTGGATGCAAGGATTTTCTCTCATCTTTGGACTCCGATTCCTCCCTCACATCAT
GCACGGACTCATTACTCAAATCCACTGCAAACTTCGGCTCTGACGGATCGCACACAAAGGCAGAGGTCACTGGAG
CCATCGACGCCGTTTGCAATGGCCCAGTTTCCTCGGCGTGCCCCGACAGTCTCATCCGCGGAAAACTTGCGGACT
TTTACTCAGCTTGTTCCGCCGAGCTCACCTCGAATCCCAACAAACAAGTTCGCGGCCTTTATGATGTCTTATACA
TCCTCATGCCCATGAAGTCTGCCATCTGCTCGAAAGACGATAGCGGCAACTACTGTGTCTTCTCTGGCACTGGTG
CCAATTCCACCGCTAATCTTCCTGCTGCAACCGACAATGGTCTCGACCTCTCAACCTTGGGCTCCAGCAACCTTG
CATTCCTATTCCGTACGGCCAACATGGATAGCACGTCGTTGTGCACTACTTGCACTCGTAACATCATATCGGGAT
ATTTCAGCTATGAGTCTGATACCCTTTACTCCCCTGGCATCAGCAACAGCGAAATGCTTGGTGGTCAGACCCCGC
TTGTCAGCGCAATTGAAAAGCAGTGCGGTGCCAACTTCCTGAGTGGTGCTGTTCAAGCCGCTGGTGGTATTCAAT
CAGGCTTCGGCTCCTCTGGAGCTGCTCAAGATAAGGTTTCAGGGGTCGTTGTCGCCCTGGTAGGCGCTTTGACCG
TCGCCATCTCTGCCCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail