Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|034350
Gene name
Locationscaffold_13:207214..207804
Strand+
Gene length (bp)590
Transcript length (bp)522
Coding sequence length (bp)522
Protein length (aa) 174

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|034350
MKPIASATILVTLIAIVGVQGRRQTSTVEQAVDSVTATGTATDAVSPSFTDTALSTATLQSDSDSLKISTDSESD
AAATSILDDETTDTWTDDSGFIPAPSMIASHPPSIPPKLTPMAGPAMTYASTSMFSAATTPTGSPNLAKSRNAGS
RVGLISSEWLVLSLVAAVAAVLL*
Coding >AgabiH97|034350
ATGAAACCCATTGCCTCAGCCACTATACTCGTCACTCTCATTGCTATTGTCGGAGTGCAAGGTCGTCGCCAAACT
TCCACTGTTGAACAAGCCGTCGATAGTGTTACAGCCACCGGCACTGCTACCGATGCTGTCTCGCCTTCTTTCACA
GACACAGCCTTATCAACCGCGACCTTGCAGAGTGACTCTGATTCTCTCAAAATCTCAACCGATTCAGAAAGTGAC
GCAGCGGCGACATCTATTTTGGACGATGAAACCACAGATACATGGACCGATGATAGCGGGTTTATTCCCGCACCT
TCCATGATCGCATCACACCCTCCCTCTATCCCGCCGAAGCTTACACCAATGGCCGGCCCTGCCATGACATACGCA
TCTACTTCCATGTTCTCCGCTGCTACCACCCCGACAGGAAGTCCCAACCTCGCTAAATCCCGGAACGCAGGATCC
AGAGTTGGACTGATTAGCTCCGAATGGCTGGTTCTGAGTTTGGTTGCTGCTGTGGCGGCTGTCTTATTGTGA
Transcript >AgabiH97|034350
ATGAAACCCATTGCCTCAGCCACTATACTCGTCACTCTCATTGCTATTGTCGGAGTGCAAGGTCGTCGCCAAACT
TCCACTGTTGAACAAGCCGTCGATAGTGTTACAGCCACCGGCACTGCTACCGATGCTGTCTCGCCTTCTTTCACA
GACACAGCCTTATCAACCGCGACCTTGCAGAGTGACTCTGATTCTCTCAAAATCTCAACCGATTCAGAAAGTGAC
GCAGCGGCGACATCTATTTTGGACGATGAAACCACAGATACATGGACCGATGATAGCGGGTTTATTCCCGCACCT
TCCATGATCGCATCACACCCTCCCTCTATCCCGCCGAAGCTTACACCAATGGCCGGCCCTGCCATGACATACGCA
TCTACTTCCATGTTCTCCGCTGCTACCACCCCGACAGGAAGTCCCAACCTCGCTAAATCCCGGAACGCAGGATCC
AGAGTTGGACTGATTAGCTCCGAATGGCTGGTTCTGAGTTTGGTTGCTGCTGTGGCGGCTGTCTTATTGTGA
Gene >AgabiH97|034350
ATGAAACCCATTGCCTCAGCCACTATACTCGTCACTCTCATTGCTATTGTCGGAGTGCAAGGTCGTCGCCAAACT
TCCACTGTTGAACAAGCCGTCGATAGTGTTACAGCCACCGGCACTGCTACCGATGCTGTCTCGCCTTCTTTCACA
GACACAGCGTAAAGACTAACTCCCTCCTGCACAAACATCAATGCGAATGACATCCATTTTTTTCCTTTCTATCTA
GCTTATCAACCGCGACCTTGCAGAGTGACTCTGATTCTCTCAAAATCTCAACCGATTCAGAAAGTGACGCAGCGG
CGACATCTATTTTGGACGATGAAACCACAGATACATGGACCGATGATAGCGGGTTTATTCCCGCACCTTCCATGA
TCGCATCACACCCTCCCTCTATCCCGCCGAAGCTTACACCAATGGCCGGCCCTGCCATGACATACGCATCTACTT
CCATGTTCTCCGCTGCTACCACCCCGACAGGAAGTCCCAACCTCGCTAAATCCCGGAACGCAGGATCCAGAGTTG
GACTGATTAGCTCCGAATGGCTGGTTCTGAGTTTGGTTGCTGCTGTGGCGGCTGTCTTATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail