Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|033740
Gene name
Location	scaffold_13:58507..59195
Strand	-
Gene length (bp)	688
Transcript length (bp)	471
Coding sequence length (bp)	471
Protein length (aa)	157

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	1.0E-08	28	100

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 14	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|033740 MEPAAPPSVADELIVHNDAFYFNHDPMVVFLVENQLFKVHRYYFIQGSEFFQNLFAEAGGGEASGTEGISDEHPI PLPGVTVKEFKTLLRFFYAMAERMEDIETGFDLLKLEIDEQLALLSISHRFMFDNIFKYMLRVICPGDLHVLDRI RFGDRD*
Coding	>AgabiH97\|033740 ATGGAGCCAGCTGCCCCCCCTTCCGTAGCGGACGAACTAATCGTGCACAATGACGCATTTTATTTCAACCATGAT CCCATGGTCGTCTTCCTAGTTGAAAATCAGTTGTTCAAGGTCCATCGCTATTATTTCATTCAAGGATCAGAGTTT TTTCAGAACTTGTTCGCTGAGGCTGGGGGAGGAGAAGCCAGTGGTACTGAGGGTATTTCTGACGAGCACCCAATT CCCCTGCCCGGTGTTACGGTGAAGGAGTTTAAAACGTTATTGCGGTTCTTCTATGCTATGGCAGAGCGCATGGAA GACATAGAAACCGGTTTTGATCTGCTGAAACTCGAAATTGATGAGCAACTCGCTCTCCTCAGCATTTCTCATCGA TTCATGTTCGATAACATCTTCAAGTACATGCTTCGCGTCATTTGTCCTGGCGACCTCCATGTCTTGGACAGAATT CGATTTGGCGACAGAGATTGA
Transcript	>AgabiH97\|033740 ATGGAGCCAGCTGCCCCCCCTTCCGTAGCGGACGAACTAATCGTGCACAATGACGCATTTTATTTCAACCATGAT CCCATGGTCGTCTTCCTAGTTGAAAATCAGTTGTTCAAGGTCCATCGCTATTATTTCATTCAAGGATCAGAGTTT TTTCAGAACTTGTTCGCTGAGGCTGGGGGAGGAGAAGCCAGTGGTACTGAGGGTATTTCTGACGAGCACCCAATT CCCCTGCCCGGTGTTACGGTGAAGGAGTTTAAAACGTTATTGCGGTTCTTCTATGCTATGGCAGAGCGCATGGAA GACATAGAAACCGGTTTTGATCTGCTGAAACTCGAAATTGATGAGCAACTCGCTCTCCTCAGCATTTCTCATCGA TTCATGTTCGATAACATCTTCAAGTACATGCTTCGCGTCATTTGTCCTGGCGACCTCCATGTCTTGGACAGAATT CGATTTGGCGACAGAGATTGA
Gene	>AgabiH97\|033740 ATGGAGCCAGCTGCCCCCCCTTCGTAAGTTGGGATCCGAGGAATGAATTGAGCCTGATATATCATCCGAGCAGCG TAGCGGACGAACTAATCGTGCACAATGACGCATTTTATTTCAACCATGATCCCATGGTCGTCTTCCTAGTGAGTT AGTGGCCCAAGAGTTACAGAATATTAATTATAGCCATAGGTTGAAAATCAGTTGTTCAAGGTCCATCGCTATTAT TTCATTCAAGGATCAGAGTTTTTTCAGAACTTGTTCGCTGAGGCTGGGGGAGGAGAAGCCAGTGGTACTGAGGGT ATTTCTGACGAGCACCCAATTCCCCTGCCCGGTGTTACGGTGAAGGAGTTTAAAACGTTATTGCGGTTCTTCTAT GCTATGTGGGTCTGTGGAATTTTTTATTGGATCGGGCGCTGACCATTGTCACACATTTCATCCAGGGCAGAGCGC ATGGAAGACATAGAAACCGGTTTTGATCTGCTGAAACTCGAAATTGATGAGCAACTCGCTCTCCTCAGCATTTCT CATCGATTCATGTTCGATAACATCTTCAAGTACATGCTTCGCGTCATTTGTCCTGGCGACCTCCATGTCTTGGAC AGAATTCGATTTGGCGACAGGTATGAACTGCGCGAATGGCTCCTTTCTGCGTACGGGACCCTTCTTGACCGTTCT TCGGAGAGATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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