© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|033730 |
| Gene name | |
| Location | scaffold_13:54884..55831 |
| Strand | - |
| Gene length (bp) | 947 |
| Transcript length (bp) | 780 |
| Coding sequence length (bp) | 780 |
| Protein length (aa) | 260 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00651 | BTB | BTB/POZ domain | 7.4E-09 | 27 | 112 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|033730 MDLNSSPGRSQTPVRAETFYLEDDSMVIFLVENQLFKVHRRFFIQGSEIFRHMFSQAGVKDTAAIGEGMSDEKPI VLKHVSVKEFRSLLRLFYAMTLPIPNKNGLSDALDFELDEKLAILSIAHRFVFDKIFEYICGKIEPDEVPVVDRI RLGDKYRLNKWLYSAYKTILGRTPGEKLSLEEADALGLERVVDVLEAKNLILHQAYSDGPSRHLTPCQSCKCRST CKYCIQWVHTTLAAISEGTEICSTVPLVRRNPHF* |
| Coding | >AgabiH97|033730 ATGGATTTGAATTCTTCCCCTGGCAGAAGCCAAACCCCTGTTCGCGCTGAGACCTTTTATCTTGAAGATGATTCG ATGGTTATCTTTCTTGTTGAGAATCAACTCTTCAAAGTTCATCGCCGGTTTTTCATTCAAGGTTCTGAGATTTTT CGCCATATGTTTTCCCAAGCCGGTGTCAAGGACACAGCCGCGATAGGTGAAGGAATGTCTGACGAGAAGCCTATT GTTCTCAAGCATGTATCTGTGAAAGAATTCCGGAGTCTTTTGCGCTTATTCTATGCAATGACACTGCCCATACCC AACAAAAACGGACTTTCTGACGCCCTGGACTTTGAGCTAGACGAGAAACTCGCTATCCTCAGCATTGCTCACCGA TTTGTCTTTGACAAAATCTTCGAGTACATCTGCGGAAAAATCGAGCCTGACGAGGTTCCGGTGGTAGATAGGATT CGCCTTGGTGACAAATATCGTCTGAACAAGTGGCTGTATTCAGCATACAAGACCATTCTGGGGCGAACTCCGGGC GAAAAGCTATCCCTCGAAGAAGCTGATGCTTTGGGTTTGGAAAGAGTTGTTGATGTCCTTGAGGCTAAGAACCTC ATATTACATCAAGCTTATTCTGACGGGCCCTCGCGTCATCTAACTCCCTGTCAAAGCTGCAAGTGTCGTTCAACT TGCAAATATTGTATTCAATGGGTTCATACAACACTAGCTGCGATCTCAGAAGGGACAGAGATATGTTCTACTGTA CCGTTGGTTAGACGCAATCCCCATTTTTAA |
| Transcript | >AgabiH97|033730 ATGGATTTGAATTCTTCCCCTGGCAGAAGCCAAACCCCTGTTCGCGCTGAGACCTTTTATCTTGAAGATGATTCG ATGGTTATCTTTCTTGTTGAGAATCAACTCTTCAAAGTTCATCGCCGGTTTTTCATTCAAGGTTCTGAGATTTTT CGCCATATGTTTTCCCAAGCCGGTGTCAAGGACACAGCCGCGATAGGTGAAGGAATGTCTGACGAGAAGCCTATT GTTCTCAAGCATGTATCTGTGAAAGAATTCCGGAGTCTTTTGCGCTTATTCTATGCAATGACACTGCCCATACCC AACAAAAACGGACTTTCTGACGCCCTGGACTTTGAGCTAGACGAGAAACTCGCTATCCTCAGCATTGCTCACCGA TTTGTCTTTGACAAAATCTTCGAGTACATCTGCGGAAAAATCGAGCCTGACGAGGTTCCGGTGGTAGATAGGATT CGCCTTGGTGACAAATATCGTCTGAACAAGTGGCTGTATTCAGCATACAAGACCATTCTGGGGCGAACTCCGGGC GAAAAGCTATCCCTCGAAGAAGCTGATGCTTTGGGTTTGGAAAGAGTTGTTGATGTCCTTGAGGCTAAGAACCTC ATATTACATCAAGCTTATTCTGACGGGCCCTCGCGTCATCTAACTCCCTGTCAAAGCTGCAAGTGTCGTTCAACT TGCAAATATTGTATTCAATGGGTTCATACAACACTAGCTGCGATCTCAGAAGGGACAGAGATATGTTCTACTGTA CCGTTGGTTAGACGCAATCCCCATTTTTAA |
| Gene | >AgabiH97|033730 ATGGATTTGAATTCTTCGTAAGACGGGTCTTGGAAAAGAAAACGCGACGAAAACTGACATCTCATCTTTGAGCCC TGGCAGAAGCCAAACCCCTGTTCGCGCTGAGACCTTTTATCTTGAAGATGATTCGATGGTTATCTTTCTTGTGAG TCGTAGTCATTCAAGTCTCAAGTAAGCAAGCTAACCGGGCGGCGCAGGTTGAGAATCAACTCTTCAAAGTTCATC GCCGGTTTTTCATTCAAGGTTCTGAGATTTTTCGCCATATGTTTTCCCAAGCCGGTGTCAAGGACACAGCCGCGA TAGGTGAAGGAATGTCTGACGAGAAGCCTATTGTTCTCAAGCATGTATCTGTGAAAGAATTCCGGAGTCTTTTGC GCTTATTCTATGCAATGTGTGCATATCTAAAATTCTCTTAAAGGCAGCGAGCTTCATCTAACTTATTACTGAACA GGACACTGCCCATACCCAACAAAAACGGACTTTCTGACGCCCTGGACTTTGAGCTAGACGAGAAACTCGCTATCC TCAGCATTGCTCACCGATTTGTCTTTGACAAAATCTTCGAGTACATCTGCGGAAAAATCGAGCCTGACGAGGTTC CGGTGGTAGATAGGATTCGCCTTGGTGACAAATATCGTCTGAACAAGTGGCTGTATTCAGCATACAAGACCATTC TGGGGCGAACTCCGGGCGAAAAGCTATCCCTCGAAGAAGCTGATGCTTTGGGTTTGGAAAGAGTTGTTGATGTCC TTGAGGCTAAGAACCTCATATTACATCAAGCTTATTCTGACGGGCCCTCGCGTCATCTAACTCCCTGTCAAAGCT GCAAGTGTCGTTCAACTTGCAAATATTGTATTCAATGGGTTCATACAACACTAGCTGCGATCTCAGAAGGGACAG AGATATGTTCTACTGTACCGTTGGTTAGACGCAATCCCCATTTTTAA |