© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|033590 |
| Gene name | |
| Location | scaffold_13:5642..6074 |
| Strand | + |
| Gene length (bp) | 432 |
| Transcript length (bp) | 432 |
| Coding sequence length (bp) | 432 |
| Protein length (aa) | 144 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.6029 | 0.5277 | 0.0379 | 0.0843 | 0.2309 | 0.081 | 0.0795 | 0.0811 | 0.0647 | 0.0205 |
| Orthofinder run ID | 1 |
| Orthogroup | 12233 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|033590 |
| Agaricus bisporus var bisporus H97 | AgabiH97|033590 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|033590 MRPKMSLLLALSSLDYSPAFLAEVHSDYLDKGLSGHFLRLDKLGLLDRRFIVSKKRTKQLIDLTAMWRRTVLERR DHQATEVPAPTLSRGTAAPSTQTELRTSIVAKVAAAPQPVRRRPPVRTGPLDAWLIHRDAPPGEDNDV* |
| Coding | >AgabiH97|033590 ATGCGCCCGAAGATGTCTCTACTCCTGGCGTTGAGTAGTCTGGATTATTCCCCGGCCTTTTTGGCTGAGGTACAT TCGGATTATCTTGACAAAGGGTTGTCAGGGCATTTTCTGCGGCTCGACAAACTCGGCCTTCTAGATCGCCGCTTT ATTGTGTCTAAAAAACGCACGAAGCAATTGATCGACCTTACCGCCATGTGGCGTCGGACCGTTCTGGAGCGCCGT GATCACCAAGCAACAGAAGTGCCTGCTCCGACACTTAGTCGTGGTACGGCGGCGCCTTCAACGCAGACGGAGCTT CGTACTTCGATTGTCGCGAAGGTTGCTGCTGCGCCGCAACCAGTTAGGAGACGGCCGCCTGTACGTACAGGTCCG CTTGACGCGTGGTTAATTCATCGGGATGCGCCTCCGGGTGAGGACAACGACGTTTGA |
| Transcript | >AgabiH97|033590 ATGCGCCCGAAGATGTCTCTACTCCTGGCGTTGAGTAGTCTGGATTATTCCCCGGCCTTTTTGGCTGAGGTACAT TCGGATTATCTTGACAAAGGGTTGTCAGGGCATTTTCTGCGGCTCGACAAACTCGGCCTTCTAGATCGCCGCTTT ATTGTGTCTAAAAAACGCACGAAGCAATTGATCGACCTTACCGCCATGTGGCGTCGGACCGTTCTGGAGCGCCGT GATCACCAAGCAACAGAAGTGCCTGCTCCGACACTTAGTCGTGGTACGGCGGCGCCTTCAACGCAGACGGAGCTT CGTACTTCGATTGTCGCGAAGGTTGCTGCTGCGCCGCAACCAGTTAGGAGACGGCCGCCTGTACGTACAGGTCCG CTTGACGCGTGGTTAATTCATCGGGATGCGCCTCCGGGTGAGGACAACGACGTTTGA |
| Gene | >AgabiH97|033590 ATGCGCCCGAAGATGTCTCTACTCCTGGCGTTGAGTAGTCTGGATTATTCCCCGGCCTTTTTGGCTGAGGTACAT TCGGATTATCTTGACAAAGGGTTGTCAGGGCATTTTCTGCGGCTCGACAAACTCGGCCTTCTAGATCGCCGCTTT ATTGTGTCTAAAAAACGCACGAAGCAATTGATCGACCTTACCGCCATGTGGCGTCGGACCGTTCTGGAGCGCCGT GATCACCAAGCAACAGAAGTGCCTGCTCCGACACTTAGTCGTGGTACGGCGGCGCCTTCAACGCAGACGGAGCTT CGTACTTCGATTGTCGCGAAGGTTGCTGCTGCGCCGCAACCAGTTAGGAGACGGCCGCCTGTACGTACAGGTCCG CTTGACGCGTGGTTAATTCATCGGGATGCGCCTCCGGGTGAGGACAACGACGTTTGA |