Protein ID | AgabiH97|033050 |
Gene name | |
Location | scaffold_12:1346496..1349751 |
Strand | - |
Gene length (bp) | 3255 |
Transcript length (bp) | 3201 |
Coding sequence length (bp) | 3201 |
Protein length (aa) | 1067 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13650 | Asp_protease_2 | Aspartyl protease | 1.1E-05 | 933 | 1020 |
PF08284 | RVP_2 | Retroviral aspartyl protease | 7.3E-06 | 925 | 1038 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 35 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|033050 MNPDTKWKAQIFGPDNEEQRATSREPRSTSPLIYGTRRRGRMPPAPTKPRASRSAPFPLRDATWSSFDQGGPSRM EEDTMRETREEGLPLPRIEDWGTAESDKTLTNIGSQVGEEVEEQREDVERRSSQTPPTKLDKGKAREASPQIEDG LVEDTMFELLGITDPERAAHIRKKAMEITDEAFKAAGMEANQTSKKYIEIFRRNIHRLAEIYGNLKDNKSPGGET PMERLGERYHEKWNNERPATSQGAVEQPATTLLPPIQMGIHQPQPQHPIQIKTEYATSVGTSMDTLGKAYKSLYE PPRENESARQYKTRLEAQERHRSISMTMNEPKVPIEVRRAKSPTRGTLPVVHFGPGQRNEKIEQENNSSTYEYDN HRRLLTSPARPLPIPPMIPKTYNPIKPTSEQSNGGCYSFIAPGPSSQQIPHESTLKNPNLDTIRPHKEKLMFETK PESNRQYSFKNYAPAEEYQTPRTQRGLSLARGMSVPMIGGIAEAIEQHQERMHERLRSIIQYYLEEPTQVPKGYK LNSSRLPSDGGIEPYKGSPKFIILERFVTAVSIDFALRGLAGTGRICDRLRNMHLPYYLQAEAKDLETIIALYDR FVLPTSTQEAKEKLSRLRYDARYGVQTFYDSIKKCAAQMNTYPEDHYLNDIFIKGIPSDMQEELILKYGMRPELN TLEEFLKCAANYENRKWLYGYYEKSLKLNTNNDRTYERRRYEKKGERSAPRGARSQPKDNDREPRKWKDYTKPFK PKHEQPAKLDLKDRIGGYAKDSKYEKKNRTESNKRKYNNDKKENKWKRKDQLKAIQLEAEEQESGYEAMSDESDY DSLYSREKQRSQIMKIGEVDESEQLTEAEDTELEIEENHEWNEDRYESSENERLNALSVTPTRKAKNETREHDEN HVKMRKVTLKKNKEKIERPKYTREAKQCMASLVKIGGLEAWALWDSGSTTTGITPALAQLAKIRVSELSESHILQ LGTVGSRSTIKYGTNTKFEIEGIQFKTYADIANFDRYDAIIGTPFMRMNNVKLDFENNEIIIRGRRVPALTITLE NEARARRYRTTEQVQK* |
Coding | >AgabiH97|033050 ATGAACCCCGACACGAAATGGAAAGCCCAGATCTTCGGACCTGACAACGAAGAACAACGAGCGACGTCTAGAGAA CCGCGTTCGACTTCACCTCTGATCTACGGAACAAGGAGAAGAGGAAGGATGCCTCCCGCTCCGACAAAACCACGA GCATCACGAAGTGCACCGTTCCCGTTGCGTGACGCCACGTGGTCGAGCTTCGACCAAGGAGGACCGAGCCGAATG GAAGAGGACACGATGAGGGAGACGAGAGAGGAAGGACTACCCCTACCGAGGATAGAGGATTGGGGTACAGCGGAA TCCGATAAAACACTGACCAATATCGGCAGTCAAGTAGGAGAAGAAGTAGAGGAACAACGAGAGGACGTTGAAAGG AGATCGAGTCAGACGCCACCAACGAAATTAGACAAAGGAAAAGCGAGGGAAGCGTCCCCGCAGATAGAAGATGGA CTAGTAGAGGATACTATGTTCGAGTTGCTAGGAATAACAGACCCGGAGAGGGCTGCACATATACGAAAAAAGGCA ATGGAAATAACAGACGAAGCATTTAAGGCAGCTGGCATGGAAGCCAACCAAACGTCGAAAAAATACATTGAGATT TTTAGAAGAAATATACATCGATTAGCCGAAATCTACGGTAACTTAAAAGACAACAAATCACCCGGGGGTGAAACG CCTATGGAACGGCTAGGAGAAAGATACCATGAGAAATGGAATAACGAGAGACCAGCAACGAGTCAAGGAGCCGTG GAACAACCGGCAACCACGTTACTACCCCCAATACAAATGGGAATACACCAGCCACAACCACAGCATCCAATCCAA ATAAAAACGGAGTATGCTACGTCCGTAGGAACATCCATGGACACATTAGGAAAAGCATATAAATCATTATACGAA CCCCCACGCGAGAACGAATCAGCTAGACAATATAAAACACGATTGGAAGCTCAAGAGAGACACAGATCGATAAGC ATGACTATGAACGAACCGAAGGTACCGATAGAAGTGCGAAGGGCTAAGAGTCCGACGAGGGGAACACTACCCGTT GTACACTTCGGACCAGGACAACGTAACGAAAAAATTGAACAAGAAAACAATTCCTCGACATATGAGTATGATAAC CATCGGAGACTACTCACGTCACCAGCGAGACCGTTACCAATACCACCAATGATACCAAAAACATATAATCCGATC AAACCAACTTCAGAACAATCTAATGGAGGATGTTATTCGTTCATAGCCCCTGGACCATCATCACAACAAATACCA CATGAATCTACACTAAAAAATCCGAACTTGGATACTATACGACCACATAAGGAGAAATTAATGTTTGAAACGAAA CCAGAAAGTAATAGACAATATAGTTTCAAAAATTATGCACCGGCGGAAGAATATCAAACCCCGAGAACTCAAAGA GGACTATCATTGGCTAGAGGAATGTCCGTACCGATGATAGGAGGAATAGCAGAAGCGATTGAGCAACATCAAGAA AGGATGCACGAGAGGCTACGAAGCATCATCCAATATTATCTAGAGGAACCAACACAGGTCCCAAAAGGTTATAAA TTAAATTCATCGAGACTACCTAGTGACGGGGGAATTGAGCCCTATAAGGGTAGTCCAAAGTTCATCATATTGGAA CGATTCGTAACAGCAGTATCCATCGACTTCGCATTGAGAGGACTAGCAGGAACAGGAAGAATATGCGATCGATTA CGCAATATGCATCTACCATATTACCTACAAGCGGAAGCGAAAGACTTAGAGACCATTATCGCACTATACGATCGA TTCGTACTACCAACGTCTACTCAAGAAGCTAAAGAGAAACTTTCACGCCTGAGATATGATGCACGCTATGGCGTA CAAACTTTCTATGATTCAATCAAAAAATGTGCAGCGCAGATGAACACTTACCCAGAAGATCATTACCTTAACGAT ATATTTATCAAAGGTATACCATCAGATATGCAGGAAGAATTAATATTAAAATACGGAATGAGACCGGAGTTAAAC ACACTAGAAGAATTCCTAAAGTGCGCAGCCAACTATGAGAATAGGAAATGGTTATATGGATACTATGAGAAATCA TTGAAACTAAATACAAACAATGACCGAACGTACGAACGACGTAGATATGAAAAGAAAGGTGAACGAAGCGCCCCA CGAGGAGCAAGATCACAACCCAAAGACAATGATAGAGAACCGCGGAAATGGAAAGACTACACGAAACCATTTAAA CCAAAGCATGAACAACCAGCCAAACTAGACCTCAAGGACAGAATAGGCGGATACGCTAAAGATTCGAAATACGAG AAAAAGAATAGAACAGAGTCGAACAAACGAAAATATAATAACGATAAAAAGGAGAACAAATGGAAAAGAAAAGAT CAACTAAAAGCCATCCAATTGGAGGCGGAGGAACAGGAATCAGGATACGAAGCAATGAGCGATGAATCAGACTAC GATTCATTATACTCACGAGAAAAACAACGATCACAAATTATGAAAATAGGAGAAGTAGACGAGAGTGAACAACTA ACAGAAGCGGAGGATACTGAATTGGAAATAGAAGAAAACCACGAATGGAATGAAGATCGATACGAATCATCAGAA AACGAGAGATTGAATGCGTTGTCCGTAACGCCAACGAGAAAAGCGAAAAATGAGACTAGAGAACACGACGAAAAT CACGTAAAAATGAGGAAAGTAACGCTAAAGAAGAATAAAGAAAAGATAGAGAGACCGAAATATACGCGTGAAGCG AAACAATGCATGGCGTCACTGGTAAAGATAGGAGGCCTAGAAGCATGGGCACTCTGGGACTCAGGCAGTACTACC ACAGGTATAACACCTGCTCTGGCTCAGTTAGCAAAAATCCGAGTGAGTGAACTATCCGAATCGCACATACTCCAA CTGGGGACAGTGGGTAGTCGATCAACAATAAAATATGGTACAAATACCAAATTTGAAATAGAAGGAATACAATTT AAAACCTATGCAGACATAGCCAACTTTGACAGATACGACGCTATAATAGGCACCCCCTTCATGCGAATGAATAAC GTAAAACTAGACTTCGAGAACAACGAAATAATAATTCGAGGTAGACGCGTTCCAGCACTAACGATCACCTTGGAA AACGAGGCACGCGCAAGGAGATATCGAACTACGGAACAAGTGCAAAAATGA |
Transcript | >AgabiH97|033050 ATGAACCCCGACACGAAATGGAAAGCCCAGATCTTCGGACCTGACAACGAAGAACAACGAGCGACGTCTAGAGAA CCGCGTTCGACTTCACCTCTGATCTACGGAACAAGGAGAAGAGGAAGGATGCCTCCCGCTCCGACAAAACCACGA GCATCACGAAGTGCACCGTTCCCGTTGCGTGACGCCACGTGGTCGAGCTTCGACCAAGGAGGACCGAGCCGAATG GAAGAGGACACGATGAGGGAGACGAGAGAGGAAGGACTACCCCTACCGAGGATAGAGGATTGGGGTACAGCGGAA TCCGATAAAACACTGACCAATATCGGCAGTCAAGTAGGAGAAGAAGTAGAGGAACAACGAGAGGACGTTGAAAGG AGATCGAGTCAGACGCCACCAACGAAATTAGACAAAGGAAAAGCGAGGGAAGCGTCCCCGCAGATAGAAGATGGA CTAGTAGAGGATACTATGTTCGAGTTGCTAGGAATAACAGACCCGGAGAGGGCTGCACATATACGAAAAAAGGCA ATGGAAATAACAGACGAAGCATTTAAGGCAGCTGGCATGGAAGCCAACCAAACGTCGAAAAAATACATTGAGATT TTTAGAAGAAATATACATCGATTAGCCGAAATCTACGGTAACTTAAAAGACAACAAATCACCCGGGGGTGAAACG CCTATGGAACGGCTAGGAGAAAGATACCATGAGAAATGGAATAACGAGAGACCAGCAACGAGTCAAGGAGCCGTG GAACAACCGGCAACCACGTTACTACCCCCAATACAAATGGGAATACACCAGCCACAACCACAGCATCCAATCCAA ATAAAAACGGAGTATGCTACGTCCGTAGGAACATCCATGGACACATTAGGAAAAGCATATAAATCATTATACGAA CCCCCACGCGAGAACGAATCAGCTAGACAATATAAAACACGATTGGAAGCTCAAGAGAGACACAGATCGATAAGC ATGACTATGAACGAACCGAAGGTACCGATAGAAGTGCGAAGGGCTAAGAGTCCGACGAGGGGAACACTACCCGTT GTACACTTCGGACCAGGACAACGTAACGAAAAAATTGAACAAGAAAACAATTCCTCGACATATGAGTATGATAAC CATCGGAGACTACTCACGTCACCAGCGAGACCGTTACCAATACCACCAATGATACCAAAAACATATAATCCGATC AAACCAACTTCAGAACAATCTAATGGAGGATGTTATTCGTTCATAGCCCCTGGACCATCATCACAACAAATACCA CATGAATCTACACTAAAAAATCCGAACTTGGATACTATACGACCACATAAGGAGAAATTAATGTTTGAAACGAAA CCAGAAAGTAATAGACAATATAGTTTCAAAAATTATGCACCGGCGGAAGAATATCAAACCCCGAGAACTCAAAGA GGACTATCATTGGCTAGAGGAATGTCCGTACCGATGATAGGAGGAATAGCAGAAGCGATTGAGCAACATCAAGAA AGGATGCACGAGAGGCTACGAAGCATCATCCAATATTATCTAGAGGAACCAACACAGGTCCCAAAAGGTTATAAA TTAAATTCATCGAGACTACCTAGTGACGGGGGAATTGAGCCCTATAAGGGTAGTCCAAAGTTCATCATATTGGAA CGATTCGTAACAGCAGTATCCATCGACTTCGCATTGAGAGGACTAGCAGGAACAGGAAGAATATGCGATCGATTA CGCAATATGCATCTACCATATTACCTACAAGCGGAAGCGAAAGACTTAGAGACCATTATCGCACTATACGATCGA TTCGTACTACCAACGTCTACTCAAGAAGCTAAAGAGAAACTTTCACGCCTGAGATATGATGCACGCTATGGCGTA CAAACTTTCTATGATTCAATCAAAAAATGTGCAGCGCAGATGAACACTTACCCAGAAGATCATTACCTTAACGAT ATATTTATCAAAGGTATACCATCAGATATGCAGGAAGAATTAATATTAAAATACGGAATGAGACCGGAGTTAAAC ACACTAGAAGAATTCCTAAAGTGCGCAGCCAACTATGAGAATAGGAAATGGTTATATGGATACTATGAGAAATCA TTGAAACTAAATACAAACAATGACCGAACGTACGAACGACGTAGATATGAAAAGAAAGGTGAACGAAGCGCCCCA CGAGGAGCAAGATCACAACCCAAAGACAATGATAGAGAACCGCGGAAATGGAAAGACTACACGAAACCATTTAAA CCAAAGCATGAACAACCAGCCAAACTAGACCTCAAGGACAGAATAGGCGGATACGCTAAAGATTCGAAATACGAG AAAAAGAATAGAACAGAGTCGAACAAACGAAAATATAATAACGATAAAAAGGAGAACAAATGGAAAAGAAAAGAT CAACTAAAAGCCATCCAATTGGAGGCGGAGGAACAGGAATCAGGATACGAAGCAATGAGCGATGAATCAGACTAC GATTCATTATACTCACGAGAAAAACAACGATCACAAATTATGAAAATAGGAGAAGTAGACGAGAGTGAACAACTA ACAGAAGCGGAGGATACTGAATTGGAAATAGAAGAAAACCACGAATGGAATGAAGATCGATACGAATCATCAGAA AACGAGAGATTGAATGCGTTGTCCGTAACGCCAACGAGAAAAGCGAAAAATGAGACTAGAGAACACGACGAAAAT CACGTAAAAATGAGGAAAGTAACGCTAAAGAAGAATAAAGAAAAGATAGAGAGACCGAAATATACGCGTGAAGCG AAACAATGCATGGCGTCACTGGTAAAGATAGGAGGCCTAGAAGCATGGGCACTCTGGGACTCAGGCAGTACTACC ACAGGTATAACACCTGCTCTGGCTCAGTTAGCAAAAATCCGAGTGAGTGAACTATCCGAATCGCACATACTCCAA CTGGGGACAGTGGGTAGTCGATCAACAATAAAATATGGTACAAATACCAAATTTGAAATAGAAGGAATACAATTT AAAACCTATGCAGACATAGCCAACTTTGACAGATACGACGCTATAATAGGCACCCCCTTCATGCGAATGAATAAC GTAAAACTAGACTTCGAGAACAACGAAATAATAATTCGAGGTAGACGCGTTCCAGCACTAACGATCACCTTGGAA AACGAGGCACGCGCAAGGAGATATCGAACTACGGAACAAGTGCAAAAATGA |
Gene | >AgabiH97|033050 ATGAACCCCGACACGAAATGGAAAGCCCAGATCTTCGGACCTGACAACGAAGAACAACGAGCGACGTCTAGAGAA CCGCGTTCGACTTCACCTCTGATCTACGGAACAAGGAGAAGAGGAAGGATGCCTCCCGCTCCGACAAAACCACGA GCATCACGAAGTGCACCGTTCCCGTTGCGTGACGCCACGTGGTCGAGCTTCGACCAAGGAGGACCGAGCCGAATG GAAGAGGACACGATGAGGGAGACGAGAGAGGAAGGACTACCCCTACCGAGGATAGAGGATTGGGGTACAGCGGAA TCCGATAAAACACTGACCAATATCGGCAGTCAAGTAGGAGAAGAAGTAGAGGAACAACGAGAGGACGTTGAAAGG AGATCGAGTCAGACGCCACCAACGAAATTAGACAAAGGAAAAGCGAGGGAAGCGTCCCCGCAGATAGAAGATGGA CTAGTAGAGGATACTATGTTCGAGTTGCTAGGAATAACAGACCCGGAGAGGGCTGCACATATACGAAAAAAGGCA ATGGAAATAACAGACGAAGCATTTAAGGCAGCTGGCATGGAAGCCAACCAAACGTCGAAAAAATACATTGAGATT TTTAGAAGAAATATACATCGATTAGCCGAAATCTACGGTAACTTAAAAGACAACAAATCACCCGGGGGTGAAACG CCTATGGAACGGCTAGGAGAAAGATACCATGAGAAATGGAATAACGAGAGACCAGCAACGAGTCAAGGAGCCGTG GAACAACCGGCAACCACGTTACTACCCCCAATACAAATGGGAATACACCAGCCACAACCACAGCATCCAATCCAA ATAAAAACGGAGTATGCTACGTCCGTAGGAACATCCATGGACACATTAGGAAAAGCATATAAATCATTATACGAA CCCCCACGCGAGAACGAATCAGCTAGACAATATAAAACACGATTGGAAGCTCAAGAGAGACACAGATCGATAAGC ATGACTATGAACGAACCGAAGGTACCGATAGAAGTGCGAAGGGCTAAGAGTCCGACGAGGGGAACACTACCCGTT GTACACTTCGGACCAGGACAACGTAACGAAAAAATTGAACAAGAAAACAATTCCTCGACATATGAGTATGATAAC CATCGGAGACTACTCACGTCACCAGCGAGACCGTTACCAATACCACCAATGATACCAAAAACATATAATCCGATC AAACCAACTTCAGAACAATCTAATGGAGGATGTTATTCGTTCATAGCCCCTGGACCATCATCACAACAAATACCA CATGAATCTACACTAAAAAATCCGAACTTGGATACTATACGACCACATAAGGAGAAATTAATGTTTGAAACGAAA CCAGAAAGTAATAGACAATATAGTTTCAAAAATTATGCACCGGCGGAAGAATATCAAACCCCGAGAACTCAAAGA GGACTATCATTGGCTAGAGGAATGTCCGTACCGATGATAGGAGGAATAGCAGAAGCGATTGAGCAACATCAAGAA AGGATGCACGAGAGGCTACGAAGCATCATCCAATATTATCTAGAGGAACCAACACAGGTCCCAAAAGGTTATAAA TTAAATTCATCGAGACTACCTAGTGACGGGGGAATTGAGCCCTATAAGGGTAGTCCAAAGTTCATCATATTGGAA CGATTCGTAACAGCAGTATCCATCGACTTCGCATTGAGAGGACTAGCAGGAACAGGAAGAATATGCGATCGATTA CGCAATATGCATCTACCATATTACCTACAAGCGGAAGCGAAAGACTTAGTAATGGAACATGTATTGGGCAGTTTA TGAGAAAAAACGGAATGGACATTTGAGGAGACCATTATCGCACTATACGATCGATTCGTACTACCAACGTCTACT CAAGAAGCTAAAGAGAAACTTTCACGCCTGAGATATGATGCACGCTATGGCGTACAAACTTTCTATGATTCAATC AAAAAATGTGCAGCGCAGATGAACACTTACCCAGAAGATCATTACCTTAACGATATATTTATCAAAGGTATACCA TCAGATATGCAGGAAGAATTAATATTAAAATACGGAATGAGACCGGAGTTAAACACACTAGAAGAATTCCTAAAG TGCGCAGCCAACTATGAGAATAGGAAATGGTTATATGGATACTATGAGAAATCATTGAAACTAAATACAAACAAT GACCGAACGTACGAACGACGTAGATATGAAAAGAAAGGTGAACGAAGCGCCCCACGAGGAGCAAGATCACAACCC AAAGACAATGATAGAGAACCGCGGAAATGGAAAGACTACACGAAACCATTTAAACCAAAGCATGAACAACCAGCC AAACTAGACCTCAAGGACAGAATAGGCGGATACGCTAAAGATTCGAAATACGAGAAAAAGAATAGAACAGAGTCG AACAAACGAAAATATAATAACGATAAAAAGGAGAACAAATGGAAAAGAAAAGATCAACTAAAAGCCATCCAATTG GAGGCGGAGGAACAGGAATCAGGATACGAAGCAATGAGCGATGAATCAGACTACGATTCATTATACTCACGAGAA AAACAACGATCACAAATTATGAAAATAGGAGAAGTAGACGAGAGTGAACAACTAACAGAAGCGGAGGATACTGAA TTGGAAATAGAAGAAAACCACGAATGGAATGAAGATCGATACGAATCATCAGAAAACGAGAGATTGAATGCGTTG TCCGTAACGCCAACGAGAAAAGCGAAAAATGAGACTAGAGAACACGACGAAAATCACGTAAAAATGAGGAAAGTA ACGCTAAAGAAGAATAAAGAAAAGATAGAGAGACCGAAATATACGCGTGAAGCGAAACAATGCATGGCGTCACTG GTAAAGATAGGAGGCCTAGAAGCATGGGCACTCTGGGACTCAGGCAGTACTACCACAGGTATAACACCTGCTCTG GCTCAGTTAGCAAAAATCCGAGTGAGTGAACTATCCGAATCGCACATACTCCAACTGGGGACAGTGGGTAGTCGA TCAACAATAAAATATGGTACAAATACCAAATTTGAAATAGAAGGAATACAATTTAAAACCTATGCAGACATAGCC AACTTTGACAGATACGACGCTATAATAGGCACCCCCTTCATGCGAATGAATAACGTAAAACTAGACTTCGAGAAC AACGAAATAATAATTCGAGGTAGACGCGTTCCAGCACTAACGATCACCTTGGAAAACGAGGCACGCGCAAGGAGA TATCGAACTACGGAACAAGTGCAAAAATGA |