Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|031500
Gene name
Locationscaffold_12:916117..917693
Strand+
Gene length (bp)1576
Transcript length (bp)951
Coding sequence length (bp)951
Protein length (aa) 317

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08450 SGL SMP-30/Gluconolactonase/LRE-like region 4.9E-12 196 292

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|031500
MMTITISIALLGASIAYANILQGRAVNAALPPQSVLVDPKSFAVLPDDFNYRTDSFNQHFNPTNSQDFPTFQVFN
GAFLDIIGSSPSISEIASNSSFAFAHEAPDHWAEQMLSSGGSQTVNVPITQIPLPDSIQMTNGATGPFNGNLILV
NSGRGTIPSTIALVNSRPPHNATFTRQVEIFSLRIPSMASLTDSCSDGKTAYIADTGASGGKPTEPGTVYAFDVD
PTTETFLNRRVLAHIDAGVPDGLQVDLNGNVYTACADGVQVFAADGTLLGKFFLDISSANMIFAGPGRMIILAET
KVFLAKIAPTTKGVVS*
Coding >AgabiH97|031500
ATGATGACGATCACCATTTCAATTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACTTCAAGGCCGAGCT
GTAAATGCCGCTCTTCCGCCTCAATCAGTTTTAGTAGACCCAAAATCATTCGCAGTCCTCCCAGACGACTTCAAT
TACCGTACCGACAGTTTCAACCAACATTTCAACCCAACCAATTCCCAGGATTTTCCCACATTTCAAGTATTTAAT
GGGGCTTTCCTCGACATCATAGGATCATCTCCTTCCATATCGGAAATCGCATCCAATTCGTCTTTTGCTTTTGCT
CATGAAGCACCTGACCACTGGGCGGAACAAATGTTGAGTTCCGGAGGTAGTCAGACTGTGAACGTGCCTATCACC
CAGATCCCATTGCCGGACAGTATACAAATGACAAACGGCGCTACGGGCCCATTCAATGGCAATCTCATACTTGTC
AATTCAGGTCGTGGAACGATACCATCTACGATTGCGTTGGTCAACTCAAGACCGCCTCATAATGCTACGTTCACC
CGACAAGTGGAAATCTTTTCTTTACGGATACCATCTATGGCTTCCTTAACAGATTCCTGCTCAGATGGGAAAACC
GCGTACATTGCCGATACAGGCGCTTCGGGCGGAAAGCCAACTGAACCGGGTACAGTATACGCGTTTGATGTCGAT
CCAACGACGGAAACATTTTTGAACCGTCGGGTACTGGCCCATATCGACGCAGGCGTACCCGATGGACTTCAAGTT
GATTTAAATGGAAATGTGTATACCGCTTGCGCTGATGGTGTTCAAGTGTTTGCTGCGGATGGCACACTTCTTGGG
AAATTCTTTTTGGATATCTCTAGTGCCAACATGATCTTTGCGGGTCCTGGCAGAATGATTATTTTAGCAGAGACA
AAGGTGTTTTTGGCAAAGATTGCGCCGACCACCAAAGGCGTTGTTTCTTAA
Transcript >AgabiH97|031500
ATGATGACGATCACCATTTCAATTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACTTCAAGGCCGAGCT
GTAAATGCCGCTCTTCCGCCTCAATCAGTTTTAGTAGACCCAAAATCATTCGCAGTCCTCCCAGACGACTTCAAT
TACCGTACCGACAGTTTCAACCAACATTTCAACCCAACCAATTCCCAGGATTTTCCCACATTTCAAGTATTTAAT
GGGGCTTTCCTCGACATCATAGGATCATCTCCTTCCATATCGGAAATCGCATCCAATTCGTCTTTTGCTTTTGCT
CATGAAGCACCTGACCACTGGGCGGAACAAATGTTGAGTTCCGGAGGTAGTCAGACTGTGAACGTGCCTATCACC
CAGATCCCATTGCCGGACAGTATACAAATGACAAACGGCGCTACGGGCCCATTCAATGGCAATCTCATACTTGTC
AATTCAGGTCGTGGAACGATACCATCTACGATTGCGTTGGTCAACTCAAGACCGCCTCATAATGCTACGTTCACC
CGACAAGTGGAAATCTTTTCTTTACGGATACCATCTATGGCTTCCTTAACAGATTCCTGCTCAGATGGGAAAACC
GCGTACATTGCCGATACAGGCGCTTCGGGCGGAAAGCCAACTGAACCGGGTACAGTATACGCGTTTGATGTCGAT
CCAACGACGGAAACATTTTTGAACCGTCGGGTACTGGCCCATATCGACGCAGGCGTACCCGATGGACTTCAAGTT
GATTTAAATGGAAATGTGTATACCGCTTGCGCTGATGGTGTTCAAGTGTTTGCTGCGGATGGCACACTTCTTGGG
AAATTCTTTTTGGATATCTCTAGTGCCAACATGATCTTTGCGGGTCCTGGCAGAATGATTATTTTAGCAGAGACA
AAGGTGTTTTTGGCAAAGATTGCGCCGACCACCAAAGGCGTTGTTTCTTAA
Gene >AgabiH97|031500
ATGATGACGATCACCATTTCAATTGCTTTACTCGGGGCCTCCATTGCATACGCAAATATACTTCAAGGCCGAGCT
GTAAATGCCGCTCTTCCGCCTCAATCAGTTGTATGTTGCCTTTGAGGCTTTAAGTTGTTAACTGCTAAACACCAT
TTCAAATCAGTTAGTAGACCCAAAATCATTCGCAGTCCTCCCAGACGACTTCAATTACCGTACCGACAGTTTCAA
CCAACATTTCAACCCAACCAATTCCCAGGATTTTCCCACATTTCAAGTATTTAATGGGGCTTTCCTCGACATCAT
AGGATCATCTCCTTCCATATCGGAAATCGCATCCAATTCGTCTTTTGCTTTTGCTCATGAAGCACCTGTATATAT
TGCGGAGACGGATGAGGTATTTTTCGCGAGTAATGACGGAGGACCACTGGGTATGAGTGATATCAATCACAACAA
TGCGTTTTTCAAGTTAAATTTGACCGAGGCGGAACAAATGTTGAGTTCCGGAGGTAGTCAGACTGTGAACGTGCC
TATCACCCAGGTAATAGTCCCTGTATACCGAATATATTTCAGGGCTAAATTCTTATTTATTGACAATTTATAGAT
CCCATTGCCGGACAGTATACAAATGACAAACGGCGCTACGGGCCCATTCAATGGCAATCTCATACTTGTCAATTC
AGGTCGTGGAACGATACCATCTACGATTGCGTTGGTCAACTCAAGACCGCCTCATAATGCTACGGTAATCTTGAA
TAATTACTATGGACGATAATTTAATTCTCTCAACGATGTCAAAGTTCACCCGACAAGTGGAAATCTTTTCTTTAC
GGATACCATGTATGTGGGGCATACAAATACCAATTACGATATCAGAGCTGATATTATTGGATCACTACAGCTATG
GCTTCCTTAACAGATTCCGTGACACGCCTCTGATTCCGGGTCAAGTATATCGCTTCGATTTGGATACCAGTGCTG
TTCGCGTTGTCGCTGACGGTATTGACAAACCGAATGGAATTGCCTTTACAGCAGATGGGAAAACCGCGTACATGT
AAGTACAATGACTTAGTCTTTCTACATTTATTAAAGCTATCTACCAAACACAGTGCCGATACAGGCGCTTCGGGC
GGAAAGCCAACTGAACCGGGTACAGTGTGAGTTATATATCTTTGTTTCTATCATAATTGATCCTTATGCGGGGCT
GGGATTATTTCGACTTAGATACGCGTTTGATGTCGATCCAACGACGGAAACATTTTTGAACCGTCGGGTACTGGC
CCATATCGACGCAGGCGTACCCGATGGACTTCAAGTTGATTTAAATGGAAATGTGTATACCGCTTGCGCTGATGG
TGTTCAAGTGCGTAAAGTTCAGTTATACCCATCGTAAAGAGCGTATCTTCATTTTCATACCATCAATTAGGTGTT
TGCTGCGGATGGCACACTTCTTGGGAAATTCTTTTTGGATATCTCTAGTGCCAACATGATCTTTGCGGGTCCTGG
CAGAATGATTATTTTAGCAGAGACAAAGGTGTTTTTGGCAAAGATTGCGCCGACCACCAAAGGCGTTGTTTCTTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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