© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|030710 |
| Gene name | |
| Location | scaffold_12:706924..708939 |
| Strand | - |
| Gene length (bp) | 2015 |
| Transcript length (bp) | 1518 |
| Coding sequence length (bp) | 1518 |
| Protein length (aa) | 506 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00704 | Glyco_hydro_18 | Glycosyl hydrolases family 18 | 8.0E-75 | 60 | 400 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32470|CHI1_APHAL | Chitinase 1 OS=Aphanocladium album GN=CHI1 PE=1 SV=2 | 50 | 439 | 5.0E-127 |
| sp|E9QRF2|CHIB1_ASPFU | Endochitinase B1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiB1 PE=3 SV=1 | 44 | 439 | 5.0E-121 |
| sp|Q873X9|CHIB1_ASPFM | Endochitinase B1 OS=Neosartorya fumigata GN=chiB1 PE=1 SV=1 | 44 | 439 | 5.0E-121 |
| sp|P48827|CHI42_TRIHA | Endochitinase 42 OS=Trichoderma harzianum GN=chit42 PE=1 SV=1 | 48 | 439 | 9.0E-121 |
| sp|E9ERT9|CHI1_METRA | Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chit1 PE=3 SV=1 | 52 | 439 | 3.0E-118 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32470|CHI1_APHAL | Chitinase 1 OS=Aphanocladium album GN=CHI1 PE=1 SV=2 | 50 | 439 | 5.0E-127 |
| sp|E9QRF2|CHIB1_ASPFU | Endochitinase B1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiB1 PE=3 SV=1 | 44 | 439 | 5.0E-121 |
| sp|Q873X9|CHIB1_ASPFM | Endochitinase B1 OS=Neosartorya fumigata GN=chiB1 PE=1 SV=1 | 44 | 439 | 5.0E-121 |
| sp|P48827|CHI42_TRIHA | Endochitinase 42 OS=Trichoderma harzianum GN=chit42 PE=1 SV=1 | 48 | 439 | 9.0E-121 |
| sp|E9ERT9|CHI1_METRA | Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chit1 PE=3 SV=1 | 52 | 439 | 3.0E-118 |
| sp|Q1E3R8|CHI1_COCIM | Endochitinase 1 OS=Coccidioides immitis (strain RS) GN=CTS1 PE=3 SV=1 | 59 | 439 | 5.0E-117 |
| sp|P0CB51|CHI1_COCPS | Endochitinase 1 OS=Coccidioides posadasii (strain RMSCC 757 / Silveira) GN=CTS1 PE=1 SV=1 | 59 | 439 | 8.0E-117 |
| sp|C5P230|CHI1_COCP7 | Endochitinase 1 OS=Coccidioides posadasii (strain C735) GN=CTS1 PE=3 SV=1 | 59 | 439 | 6.0E-116 |
| sp|A6N6J0|CHI46_TRIHA | Endochitinase 46 OS=Trichoderma harzianum GN=chit46 PE=1 SV=1 | 46 | 439 | 8.0E-116 |
| sp|Q92222|CHIB_EMEND | Endochitinase B OS=Emericella nidulans GN=chiB PE=1 SV=3 | 59 | 436 | 9.0E-114 |
| sp|G5EAZ3|CHIB1_EMENI | Endochitinase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiB PE=1 SV=1 | 59 | 436 | 9.0E-114 |
| sp|O14456|CHI1_METAN | Endochitinase 1 OS=Metarhizium anisopliae GN=chit1 PE=1 SV=1 | 50 | 439 | 9.0E-112 |
| sp|Q5AM60|CHI4_CANAL | Chitinase 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT4 PE=3 SV=1 | 61 | 426 | 2.0E-57 |
| sp|P20533|CHIA1_BACCI | Chitinase A1 OS=Bacillus circulans GN=chiA1 PE=1 SV=1 | 62 | 401 | 7.0E-45 |
| sp|Q06350|CHI2_YEAST | Sporulation-specific chitinase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS2 PE=1 SV=1 | 41 | 396 | 7.0E-44 |
| sp|P11797|CHIB_SERMA | Chitinase B OS=Serratia marcescens GN=chiB PE=1 SV=1 | 76 | 497 | 4.0E-43 |
| sp|Q13231|CHIT1_HUMAN | Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1 | 61 | 420 | 1.0E-42 |
| sp|Q95M17|CHIA_BOVIN | Acidic mammalian chitinase OS=Bos taurus GN=CHIA PE=1 SV=1 | 61 | 423 | 1.0E-40 |
| sp|Q11174|CHIT_CAEEL | Probable endochitinase OS=Caenorhabditis elegans GN=cht-1 PE=1 SV=1 | 1 | 418 | 2.0E-39 |
| sp|Q9D7Q1|CHIT1_MOUSE | Chitotriosidase-1 OS=Mus musculus GN=Chit1 PE=1 SV=2 | 61 | 400 | 4.0E-38 |
| sp|Q91XA9|CHIA_MOUSE | Acidic mammalian chitinase OS=Mus musculus GN=Chia PE=1 SV=2 | 60 | 400 | 3.0E-37 |
| sp|P36909|CHIT_STRLI | Chitinase C OS=Streptomyces lividans GN=chiC PE=2 SV=1 | 56 | 400 | 4.0E-37 |
| sp|Q6RY07|CHIA_RAT | Acidic mammalian chitinase OS=Rattus norvegicus GN=Chia PE=2 SV=1 | 61 | 400 | 2.0E-36 |
| sp|P32823|CHIA_PSEO7 | Chitinase A OS=Pseudoalteromonas piscicida GN=chiA PE=1 SV=1 | 39 | 400 | 3.0E-35 |
| sp|Q9BZP6|CHIA_HUMAN | Acidic mammalian chitinase OS=Homo sapiens GN=CHIA PE=1 SV=1 | 61 | 400 | 3.0E-34 |
| sp|P11220|CHIT_STRPL | Chitinase 63 OS=Streptomyces plicatus GN=chtA PE=1 SV=2 | 56 | 410 | 4.0E-34 |
| sp|Q9W5U2|CHIT3_DROME | Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 | 51 | 400 | 1.0E-33 |
| sp|O10363|CHIT_NPVOP | Probable endochitinase OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF124 PE=3 SV=1 | 53 | 400 | 1.0E-32 |
| sp|Q5RBP6|CH3L1_PONAB | Chitinase-3-like protein 1 OS=Pongo abelii GN=CHI3L1 PE=2 SV=1 | 61 | 400 | 2.0E-32 |
| sp|P41684|CHIT_NPVAC | Probable endochitinase OS=Autographa californica nuclear polyhedrosis virus PE=3 SV=1 | 53 | 400 | 3.0E-32 |
| sp|Q61362|CH3L1_MOUSE | Chitinase-3-like protein 1 OS=Mus musculus GN=Chi3l1 PE=1 SV=3 | 61 | 400 | 3.0E-32 |
| sp|Q9WTV1|CH3L1_RAT | Chitinase-3-like protein 1 OS=Rattus norvegicus GN=Chi3l1 PE=2 SV=3 | 61 | 400 | 1.0E-31 |
| sp|P36222|CH3L1_HUMAN | Chitinase-3-like protein 1 OS=Homo sapiens GN=CHI3L1 PE=1 SV=2 | 61 | 400 | 2.0E-31 |
| sp|Q29411|CH3L1_PIG | Chitinase-3-like protein 1 OS=Sus scrofa GN=CHI3L1 PE=1 SV=2 | 61 | 400 | 3.0E-30 |
| sp|P07254|CHIA_SERMA | Chitinase A OS=Serratia marcescens GN=chiA PE=1 SV=3 | 18 | 400 | 5.0E-30 |
| sp|Q9W092|CHIT2_DROME | Probable chitinase 2 OS=Drosophila melanogaster GN=Cht2 PE=1 SV=1 | 57 | 400 | 3.0E-29 |
| sp|Q8SPQ0|CH3L1_CAPHI | Chitinase-3-like protein 1 OS=Capra hircus GN=CHI3L1 PE=1 SV=1 | 60 | 400 | 7.0E-29 |
| sp|Q6TMG6|CH3L1_SHEEP | Chitinase-3-like protein 1 OS=Ovis aries GN=CHI3L1 PE=1 SV=1 | 61 | 400 | 9.0E-29 |
| sp|Q15782|CH3L2_HUMAN | Chitinase-3-like protein 2 OS=Homo sapiens GN=CHI3L2 PE=1 SV=1 | 61 | 418 | 1.0E-28 |
| sp|Q9W5U2|CHIT3_DROME | Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 | 11 | 400 | 2.0E-28 |
| sp|P36362|CHIT_MANSE | Endochitinase OS=Manduca sexta PE=2 SV=1 | 61 | 400 | 2.0E-28 |
| sp|Q91Z98|CHIL4_MOUSE | Chitinase-like protein 4 OS=Mus musculus GN=Chil4 PE=1 SV=2 | 60 | 409 | 2.0E-28 |
| sp|P30922|CH3L1_BOVIN | Chitinase-3-like protein 1 OS=Bos taurus GN=CHI3L1 PE=1 SV=3 | 60 | 400 | 5.0E-28 |
| sp|Q9W5U2|CHIT3_DROME | Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 | 54 | 400 | 6.0E-28 |
| sp|O35744|CHIL3_MOUSE | Chitinase-like protein 3 OS=Mus musculus GN=Chil3 PE=1 SV=2 | 60 | 409 | 5.0E-27 |
| sp|P29030|CHIT_BRUMA | Endochitinase OS=Brugia malayi PE=1 SV=1 | 61 | 400 | 9.0E-27 |
| sp|Q7YS85|CH3L1_BUBBU | Chitinase-3-like protein 1 OS=Bubalus bubalis GN=CHI3L1 PE=1 SV=3 | 60 | 400 | 9.0E-27 |
| sp|Q62010|OVGP1_MOUSE | Oviduct-specific glycoprotein OS=Mus musculus GN=Ovgp1 PE=2 SV=1 | 61 | 402 | 5.0E-26 |
| sp|Q60557|OVGP1_MESAU | Oviduct-specific glycoprotein OS=Mesocricetus auratus GN=OVGP1 PE=1 SV=1 | 61 | 402 | 8.0E-26 |
| sp|P36718|OVGP1_PAPAN | Oviduct-specific glycoprotein OS=Papio anubis GN=OVGP1 PE=2 SV=2 | 61 | 402 | 1.0E-25 |
| sp|Q12889|OVGP1_HUMAN | Oviduct-specific glycoprotein OS=Homo sapiens GN=OVGP1 PE=2 SV=1 | 61 | 402 | 7.0E-25 |
| sp|Q28542|OVGP1_SHEEP | Oviduct-specific glycoprotein OS=Ovis aries GN=OVGP1 PE=1 SV=1 | 61 | 400 | 2.0E-23 |
| sp|Q28042|OVGP1_BOVIN | Oviduct-specific glycoprotein (Fragment) OS=Bos taurus GN=OVGP1 PE=1 SV=1 | 61 | 400 | 9.0E-23 |
| sp|Q28990|OVGP1_PIG | Oviduct-specific glycoprotein OS=Sus scrofa GN=OVGP1 PE=2 SV=1 | 61 | 402 | 2.0E-22 |
| sp|A5FB63|CHIA_FLAJ1 | Chitinase ChiA OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=chiA PE=1 SV=1 | 52 | 418 | 6.0E-22 |
| sp|H2A0L4|CHI1_PINMG | Putative chitinase 1 OS=Pinctada margaritifera PE=1 SV=1 | 61 | 400 | 8.0E-21 |
| sp|H2A0L5|CHI2_PINMG | Putative chitinase 2 OS=Pinctada margaritifera PE=1 SV=1 | 60 | 400 | 5.0E-20 |
| sp|P86955|CHI_PINMA | Putative chitinase OS=Pinctada maxima PE=1 SV=1 | 60 | 400 | 9.0E-19 |
| sp|Q9W5U2|CHIT3_DROME | Probable chitinase 3 OS=Drosophila melanogaster GN=Cht3 PE=2 SV=2 | 56 | 449 | 1.0E-17 |
| sp|Q2PQM7|IDGF4_GLOMM | Chitinase-like protein Idgf4 OS=Glossina morsitans morsitans GN=Idgf4 PE=2 SV=1 | 127 | 400 | 4.0E-17 |
| sp|Q9W303|IDGF4_DROME | Chitinase-like protein Idgf4 OS=Drosophila melanogaster GN=Idgf4 PE=2 SV=1 | 76 | 406 | 2.0E-14 |
| sp|P96156|CHID_VIBFU | Chitodextrinase OS=Vibrio furnissii GN=endo I PE=1 SV=1 | 57 | 319 | 9.0E-13 |
| sp|Q23997|C5210_DROME | Chitinase-like protein CG5210 OS=Drosophila melanogaster GN=CG5210 PE=1 SV=2 | 127 | 400 | 3.0E-12 |
| sp|Q9V3D4|IDGF2_DROME | Chitinase-like protein Idgf2 OS=Drosophila melanogaster GN=Idgf2 PE=1 SV=1 | 129 | 400 | 4.0E-12 |
| sp|Q5AKZ3|CHI5_CANAL | Probable chitinase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CaO19.12451 PE=3 SV=1 | 136 | 325 | 2.0E-10 |
| sp|Q9GV28|IDGFL_BOMMO | Chitinase-like protein EN03 OS=Bombyx mori GN=EN03 PE=1 SV=1 | 71 | 400 | 4.0E-10 |
| sp|Q8MX31|IDGF3_DROYA | Chitinase-like protein Idgf3 OS=Drosophila yakuba GN=Idgf3 PE=3 SV=1 | 84 | 400 | 3.0E-08 |
| sp|Q8MLZ7|IDGF3_DROME | Chitinase-like protein Idgf3 OS=Drosophila melanogaster GN=Idgf3 PE=1 SV=3 | 84 | 400 | 8.0E-08 |
| sp|P09805|KTXA_KLULA | Killer toxin subunits alpha/beta OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) PE=1 SV=1 | 137 | 318 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 106.30 | 50.48 | 162.13 |
| Initials | Initials knots | 80.98 | 48.36 | 113.61 |
| Pileal_Stipeal_center | Stage I stipe center | 32.62 | 18.60 | 46.64 |
| Pileal_Stipeal_shell | Stage I stipe shell | 24.23 | 13.11 | 35.35 |
| DIF_stipe_center | Stage II stipe center | 48.48 | 28.86 | 68.10 |
| DIF_stipe_shell | Stage II stipe shell | 40.81 | 24.06 | 57.55 |
| DIF_stipe_skin | Stage II stipe skin | 35.29 | 20.61 | 49.96 |
| DIF_cap_skin | Stage II cap skin | 22.12 | 12.28 | 31.97 |
| DIF_cap_tissue | Stage II cap tissue | 21.55 | 11.93 | 31.17 |
| DIF_gill_tissue | Stage II gill tissue | 21.36 | 11.86 | 30.85 |
| YFB_stipe_center | Young fruiting body stipe center | 66.43 | 39.55 | 93.32 |
| YFB_stipe_shell | Young fruiting body stipe shell | 63.56 | 38.13 | 88.98 |
| YFB_stipe_skin | Young fruiting body stipe skin | 40.66 | 23.94 | 57.39 |
| YFB_cap_skin | Young fruiting body cap skin | 24.48 | 13.80 | 35.16 |
| YFB_cap_tissue | Young fruiting body cap tissue | 33.70 | 19.61 | 47.78 |
| YFB_gill_tissue | Young fruiting body gill tissue | 21.49 | 11.88 | 31.09 |
| YFB_veil | Young fruiting body veil | 17.51 | 9.47 | 25.55 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.000613 | yes |
| Casing | YFB_stipe_center | 0.156383 | no |
| Casing | YFB_stipe_shell | 0.114428 | no |
| Casing | YFB_stipe_skin | 0.000613 | yes |
| Casing | YFB_cap_skin | 0.000613 | yes |
| Casing | YFB_cap_tissue | 0.000613 | yes |
| Casing | YFB_gill_tissue | 0.000613 | yes |
| Casing | YFB_veil | 0.000613 | yes |
| Casing | Initials | 0.493171 | no |
| Casing | Pileal_Stipeal_center | 0.000613 | yes |
| Casing | Pileal_Stipeal_shell | 0.000613 | yes |
| Casing | DIF_stipe_center | 0.010728 | yes |
| Casing | DIF_stipe_shell | 0.000613 | yes |
| Casing | DIF_stipe_skin | 0.000613 | yes |
| Casing | DIF_cap_skin | 0.000613 | yes |
| Casing | DIF_cap_tissue | 0.000613 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.000613 | yes |
| DIF_gill_tissue | YFB_stipe_shell | 0.000613 | yes |
| DIF_gill_tissue | YFB_stipe_skin | 0.019987 | yes |
| DIF_gill_tissue | YFB_cap_skin | 0.774730 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.135006 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.990811 | no |
| DIF_gill_tissue | YFB_veil | 0.654041 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.932441 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.078410 | no |
| YFB_stipe_center | YFB_cap_skin | 0.000613 | yes |
| YFB_stipe_center | YFB_cap_tissue | 0.011041 | yes |
| YFB_stipe_center | YFB_gill_tissue | 0.000613 | yes |
| YFB_stipe_center | YFB_veil | 0.000613 | yes |
| YFB_stipe_shell | YFB_stipe_skin | 0.110231 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.001140 | yes |
| YFB_stipe_shell | YFB_cap_tissue | 0.014956 | yes |
| YFB_stipe_shell | YFB_gill_tissue | 0.000613 | yes |
| YFB_stipe_shell | YFB_veil | 0.000613 | yes |
| YFB_stipe_skin | YFB_cap_skin | 0.075016 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.628489 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.020523 | yes |
| YFB_stipe_skin | YFB_veil | 0.002084 | yes |
| YFB_cap_skin | YFB_cap_tissue | 0.350576 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.788263 | no |
| YFB_cap_skin | YFB_veil | 0.353264 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.144709 | no |
| YFB_cap_tissue | YFB_veil | 0.025205 | yes |
| YFB_gill_tissue | YFB_veil | 0.641778 | no |
| Initials | DIF_gill_tissue | 0.000613 | yes |
| Initials | YFB_stipe_center | 0.592128 | no |
| Initials | YFB_stipe_shell | 0.481618 | no |
| Initials | YFB_stipe_skin | 0.009773 | yes |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.000613 | yes |
| Initials | YFB_veil | 0.000613 | yes |
| Initials | Pileal_Stipeal_center | 0.001140 | yes |
| Initials | Pileal_Stipeal_shell | 0.000613 | yes |
| Initials | DIF_stipe_center | 0.060299 | no |
| Initials | DIF_stipe_shell | 0.010093 | yes |
| Initials | DIF_stipe_skin | 0.000613 | yes |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.176045 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.007439 | yes |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.012274 | yes |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.548865 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.415354 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.954923 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.187178 | no |
| Pileal_Stipeal_center | YFB_veil | 0.034377 | yes |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.415213 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.187434 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.536719 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.875069 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.229477 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.190009 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.806363 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.000613 | yes |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.000613 | yes |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.086750 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.987629 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.347054 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.814221 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.388722 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.011968 | yes |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.086247 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.254646 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.870122 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.821698 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.001140 | yes |
| DIF_stipe_center | YFB_stipe_center | 0.319878 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.417465 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.652734 | no |
| DIF_stipe_center | YFB_cap_skin | 0.015242 | yes |
| DIF_stipe_center | YFB_cap_tissue | 0.238213 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.002951 | yes |
| DIF_stipe_center | YFB_veil | 0.000613 | yes |
| DIF_stipe_center | DIF_stipe_shell | 0.657798 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.320650 | no |
| DIF_stipe_center | DIF_cap_skin | 0.004548 | yes |
| DIF_stipe_center | DIF_cap_tissue | 0.002525 | yes |
| DIF_stipe_shell | DIF_gill_tissue | 0.021322 | yes |
| DIF_stipe_shell | YFB_stipe_center | 0.074661 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.115346 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.994225 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.074840 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.623771 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.020790 | yes |
| DIF_stipe_shell | YFB_veil | 0.002084 | yes |
| DIF_stipe_shell | DIF_stipe_skin | 0.729192 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.032504 | yes |
| DIF_stipe_shell | DIF_cap_tissue | 0.021056 | yes |
| DIF_stipe_skin | DIF_gill_tissue | 0.089979 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.017783 | yes |
| DIF_stipe_skin | YFB_stipe_shell | 0.026955 | yes |
| DIF_stipe_skin | YFB_stipe_skin | 0.736784 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.250586 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.932665 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.093505 | no |
| DIF_stipe_skin | YFB_veil | 0.013485 | yes |
| DIF_stipe_skin | DIF_cap_skin | 0.125729 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.096131 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.954483 | no |
| DIF_cap_skin | YFB_stipe_center | 0.000613 | yes |
| DIF_cap_skin | YFB_stipe_shell | 0.000613 | yes |
| DIF_cap_skin | YFB_stipe_skin | 0.030372 | yes |
| DIF_cap_skin | YFB_cap_skin | 0.843227 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.181928 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.960790 | no |
| DIF_cap_skin | YFB_veil | 0.570717 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.965907 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.987653 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.000613 | yes |
| DIF_cap_tissue | YFB_stipe_shell | 0.000613 | yes |
| DIF_cap_tissue | YFB_stipe_skin | 0.021846 | yes |
| DIF_cap_tissue | YFB_cap_skin | 0.792120 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.149487 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.995010 | no |
| DIF_cap_tissue | YFB_veil | 0.632144 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|030710 MALRNFLRAVTFVLAALSAVEATQVMHRPDAYKDAPRKFSIETDPKTHRIQKRATSKASFAYFTNWGIYGANFQP TDIIPGPLTHILYSFADTDASTGHIKLTDSFADVEKHFPGDSWDETGNNVYGCFKQLYLLKLQRRNLKVLLSIGG WTYSQSGHFNFVTSASARQNFANDAVQLVKDYGLDGIDIDFEYPANSAQGQGLADLVTSLRSALDQLASSNGDST PYLITAAVAAGSANYGNYVVPQMNQALNYWNLMAYDYAGSWLTWADNQANLFGGARTGVNTDSAVQHYVSSGATS SKINLGMPLYGRAFEATNGLGQSYSGIGPGTIEAGIYSYETLPLAGAQVFENTTDVSSYSYDSSKRELVSYDTPN IIKLKAQYVNTKGLGGSMFWELSTDKVGSGSLIQVSANTLGSLDQTQNHINYPNSKWDNIRNNMGGGGGGGGTNP PPTGSCSGTAAWESSKVYTGGMTATYNGHLWTAKWWTQNETPGSSSGVWTDNGAC* |
| Coding | >AgabiH97|030710 ATGGCTCTACGAAATTTTCTTCGAGCTGTTACGTTTGTGTTGGCTGCATTGAGTGCAGTTGAAGCCACACAGGTT ATGCATAGACCCGACGCGTACAAAGACGCTCCCCGCAAGTTTTCTATAGAAACTGACCCGAAGACCCATCGGATC CAAAAGCGTGCTACTTCCAAGGCTTCTTTTGCCTACTTCACCAATTGGGGCATCTATGGAGCTAACTTCCAACCC ACCGATATCATCCCAGGCCCTCTCACTCATATTCTCTACTCTTTCGCCGACACCGATGCTTCGACTGGACATATA AAATTGACCGATAGTTTTGCCGATGTAGAGAAACATTTCCCAGGCGATTCTTGGGATGAAACGGGGAACAACGTT TACGGTTGTTTCAAACAACTATACCTCCTCAAGTTGCAACGTCGTAATTTGAAAGTTCTTCTCTCAATCGGCGGA TGGACATACTCCCAGTCTGGCCATTTCAACTTCGTGACTTCCGCATCTGCGCGTCAGAATTTCGCAAATGACGCT GTACAATTGGTTAAAGATTACGGGCTTGATGGAATTGATATCGACTTTGAATACCCTGCCAACAGCGCCCAAGGT CAAGGTCTGGCTGACCTTGTCACCTCCCTTCGTTCCGCGCTCGACCAACTTGCCTCCAGCAATGGAGATTCCACC CCTTACCTCATCACCGCTGCCGTCGCTGCAGGTTCTGCAAACTATGGAAACTATGTCGTTCCCCAGATGAATCAA GCCTTAAACTACTGGAACTTGATGGCATACGACTATGCCGGCTCCTGGTTGACATGGGCTGACAATCAAGCCAAC CTATTTGGTGGTGCGAGGACTGGTGTTAACACTGACTCGGCGGTCCAACACTACGTGAGCTCTGGCGCGACATCC AGTAAGATTAACCTCGGCATGCCCTTGTACGGTCGTGCATTCGAAGCCACCAATGGCCTCGGTCAATCCTACAGC GGTATCGGTCCTGGTACAATCGAGGCTGGCATTTACTCTTACGAGACCCTTCCACTTGCTGGCGCTCAGGTCTTC GAAAATACCACTGATGTCAGCTCCTACTCGTACGATTCTTCAAAGAGAGAACTTGTCTCTTACGACACACCCAAC ATCATTAAACTGAAGGCCCAGTATGTCAATACAAAAGGATTGGGTGGTAGCATGTTCTGGGAACTTTCAACGGAC AAGGTCGGCTCTGGGAGTCTTATTCAGGTTTCAGCCAATACCCTTGGCTCTTTGGACCAGACTCAGAATCATATC AACTATCCTAATAGCAAGTGGGACAACATCAGAAACAATATGGGCGGCGGAGGCGGTGGTGGTGGTACAAACCCA CCGCCAACAGGATCGTGCAGTGGCACTGCTGCGTGGGAGTCCTCGAAGGTTTATACCGGTGGCATGACAGCTACT TACAACGGTCATTTATGGACTGCCAAATGGTGGACACAGAATGAGACCCCCGGATCTAGCAGCGGTGTCTGGACA GACAACGGTGCTTGTTGA |
| Transcript | >AgabiH97|030710 ATGGCTCTACGAAATTTTCTTCGAGCTGTTACGTTTGTGTTGGCTGCATTGAGTGCAGTTGAAGCCACACAGGTT ATGCATAGACCCGACGCGTACAAAGACGCTCCCCGCAAGTTTTCTATAGAAACTGACCCGAAGACCCATCGGATC CAAAAGCGTGCTACTTCCAAGGCTTCTTTTGCCTACTTCACCAATTGGGGCATCTATGGAGCTAACTTCCAACCC ACCGATATCATCCCAGGCCCTCTCACTCATATTCTCTACTCTTTCGCCGACACCGATGCTTCGACTGGACATATA AAATTGACCGATAGTTTTGCCGATGTAGAGAAACATTTCCCAGGCGATTCTTGGGATGAAACGGGGAACAACGTT TACGGTTGTTTCAAACAACTATACCTCCTCAAGTTGCAACGTCGTAATTTGAAAGTTCTTCTCTCAATCGGCGGA TGGACATACTCCCAGTCTGGCCATTTCAACTTCGTGACTTCCGCATCTGCGCGTCAGAATTTCGCAAATGACGCT GTACAATTGGTTAAAGATTACGGGCTTGATGGAATTGATATCGACTTTGAATACCCTGCCAACAGCGCCCAAGGT CAAGGTCTGGCTGACCTTGTCACCTCCCTTCGTTCCGCGCTCGACCAACTTGCCTCCAGCAATGGAGATTCCACC CCTTACCTCATCACCGCTGCCGTCGCTGCAGGTTCTGCAAACTATGGAAACTATGTCGTTCCCCAGATGAATCAA GCCTTAAACTACTGGAACTTGATGGCATACGACTATGCCGGCTCCTGGTTGACATGGGCTGACAATCAAGCCAAC CTATTTGGTGGTGCGAGGACTGGTGTTAACACTGACTCGGCGGTCCAACACTACGTGAGCTCTGGCGCGACATCC AGTAAGATTAACCTCGGCATGCCCTTGTACGGTCGTGCATTCGAAGCCACCAATGGCCTCGGTCAATCCTACAGC GGTATCGGTCCTGGTACAATCGAGGCTGGCATTTACTCTTACGAGACCCTTCCACTTGCTGGCGCTCAGGTCTTC GAAAATACCACTGATGTCAGCTCCTACTCGTACGATTCTTCAAAGAGAGAACTTGTCTCTTACGACACACCCAAC ATCATTAAACTGAAGGCCCAGTATGTCAATACAAAAGGATTGGGTGGTAGCATGTTCTGGGAACTTTCAACGGAC AAGGTCGGCTCTGGGAGTCTTATTCAGGTTTCAGCCAATACCCTTGGCTCTTTGGACCAGACTCAGAATCATATC AACTATCCTAATAGCAAGTGGGACAACATCAGAAACAATATGGGCGGCGGAGGCGGTGGTGGTGGTACAAACCCA CCGCCAACAGGATCGTGCAGTGGCACTGCTGCGTGGGAGTCCTCGAAGGTTTATACCGGTGGCATGACAGCTACT TACAACGGTCATTTATGGACTGCCAAATGGTGGACACAGAATGAGACCCCCGGATCTAGCAGCGGTGTCTGGACA GACAACGGTGCTTGTTGA |
| Gene | >AgabiH97|030710 ATGGCTCTACGAAATTTTCTTCGAGCTGTTACGTTTGTGTTGGCTGCATTGAGTGCAGTTGAAGCCACACAGGTT ATGCATAGACCCGACGCGTACAAAGACGCTCCCCGCAAGTTTTCTATAGAAACTGACCCGAAGACCCATCGGATC CAAAAGCGTGCTACTTCCAAGGCTTCTTTTGCCTACTTCACCAATTGGGGCATCTATGGAGCTAACTTCCGTACG TTTGATTTCTTCACTGCGCAATCAATCCACATATTCTAAATCATCATGTAGAACCCACCGATATCATCCCAGGCC CTCTCACTCGTAAGCCCTCGTTGTGTTATGGTAACAATAAACTTCGGCTAATCACGACTTTCTAAGATATTCTCT ACTCTTTCGCCGACACCGATGCTTCGACTGGACATATAAAATTGACCGATAGTTTTGCCGATGTAGAGAAACATT TCCCAGGCGATTCTTGGGATGAAACGGGGAACAACGTTTACGGTTGTTTCAAACAACTATACCTCCTCAAGTTGC AACGTCGTAATTTGAAAGTTCTTCTCTCAATCGGCGGATGGACATACTCCCAGTCTGGCCATTTCAACTTCGTGA CTTCCGCATCTGCGCGTCAGAATTTCGCAAATGACGCTGTACAATTGGTTAAAGATTACGGGCTTGATGGAATGT AAGAGGTTGCCTCGTTTACTCATACACACATCAACTGACGGTACCATCTCAATACAGTGATATCGACTTTGAATA CCCTGCCAACAGCGCCCAAGGTCAAGGTCTGGCTGACCTTGTCACCTCCCTTCGTTCCGCGCTCGACCAACTTGC CTCCAGCAATGGAGATTCCACCCCTTACCTCATCACCGCTGCCGTCGCTGCAGGTTCTGCAAACTATGGAAACTA TGTCGTTCCCCAGATGAATCAAGCCTTAAACTACTGGAACTTGATGGTAAATTTAACTACTTCCTTTGCTACTAG CTTCTTACGCTCATCGGGACTAATAGGCATACGACTATGCCGGCTCCTGGTTGACATGGGCTGACAATCAAGCCA ACCTATTTGGTGGTGCGAGGACTGGTGTTAACACTGACTCGGCGGTCCAACACTACGTGAGCTCTGGCGCGACAT CCAGTAAGATTAACCTCGGCATGCCCTTGTACGGTCGTGCATTCGAAGCCACCAATGGCCTCGGTCAATCCTACA GCGGTGTACGTTCCAGCTCAATCTTTTCAGAGTGTGACGAGTTCAAAGTTAATTTTAACCGCCTAGATCGGTCCT GGTACAATCGAGGCTGGCATTTACTCTTACGAGACCCTTCCACGTATGTATAATCCGTTATGCCGGATACAGAGA ACTTACAATTATTTCCCAGTTGCTGGCGCTCAGGTCTTCGAAAATACCACTGATGTCAGCTCCTACTCGTACGAT TCTTCAAAGAGAGAACTTGTCTCTTACGACACACCCAACATCATTAAACTGAAGGCCCAGTATGTCAATACAAAA GGATTGGGTGGTAGCATGTTCTGGGAACTTTCAACGGACAAGGTCGGCTCTGGGAGTCTTATTCAGGTTTCAGCC AATACCCTTGGCTCTTTGGACCAGACTCAGAATCATATCAAGTACGTTATCAAAGTGTTTCGTCGTGAGATCCAT GCTGATAGATATGATCATCAGCTATCCTAATAGCAAGTGGGACAACATCAGAAACAATATGGGCGGCGGAGGCGG TGGTGGTGGTACAAACCCACCGCCAACAGGATCGTGCAGTGGCACTGCTGCGTGGGAGTCCTCGAAGGTTTATAC CGGTGGCATGACAGCTACTTACAGTGAGTGTCTGCGCTTCCATGGGCTGAATCAAGCTGAAATTGTCCGCGTATA GACGGTCATTTATGGACTGCCAAATGGTGGACACAGAATGAGACCCCCGGATCTAGCAGTAGGTCCTATCGTATC ATATAGCGTCACATTTAGCTAATACAATGACAGGCGGTGTCTGGACAGACAACGGTGCTTGTTGA |