© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|030510 |
| Gene name | |
| Location | scaffold_12:637019..638013 |
| Strand | + |
| Gene length (bp) | 994 |
| Transcript length (bp) | 873 |
| Coding sequence length (bp) | 873 |
| Protein length (aa) | 291 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.0E-13 | 62 | 156 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 2.9E-11 | 47 | 210 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.9E-09 | 63 | 158 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.2E-07 | 57 | 175 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 1.0E-04 | 60 | 165 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.6662 | 0.5419 | 0.0635 | 0.0499 | 0.0774 | 0.013 | 0.1934 | 0.1617 | 0.1294 | 0.0068 |
| Orthofinder run ID | 1 |
| Orthogroup | 288 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|030510 MIQAGIQHTVTRQYTQVKGTAYSLPHDAEEQRRLTLQSDVFLRATDNKVLHAPIKLNDDDRVLETATGTGIWLQD LARETHAKPQYTGVDIESAFFPKASTLPPNMRFETQSVTALPSEWTNHFSLVHQRLLIAALRRHEWGTALKEIYR VLKPGGWVQLLEMQGWTSGPALAKHTDLLFKFSDDVGIMYRDIAKRLPDFLEESGFANIHQDPRGTPLGAWAGTD GVDGKEVLMGVLEGLKTPILRKGGYGIIESETEYDALLKEISEELDNTPGSVAKWTMFWAQKPLE* |
| Coding | >AgabiH97|030510 ATGATCCAAGCAGGTATCCAGCATACAGTGACTCGCCAGTATACCCAAGTCAAGGGTACAGCGTATTCCTTGCCA CATGACGCAGAAGAACAGCGAAGGTTGACGTTACAGAGCGATGTGTTTCTCCGTGCAACGGATAACAAGGTTCTC CACGCGCCCATCAAACTCAATGACGATGATCGAGTTCTGGAGACTGCTACTGGCACAGGTATTTGGCTTCAGGAC CTAGCAAGAGAGACGCATGCGAAGCCACAGTACACCGGTGTTGATATCGAATCGGCTTTCTTCCCAAAAGCCTCT ACTCTTCCCCCCAATATGCGATTTGAAACCCAATCCGTCACTGCCCTTCCAAGCGAATGGACAAACCACTTTAGT CTCGTTCATCAACGTCTCCTTATTGCTGCGCTCCGCAGGCACGAATGGGGAACGGCTCTCAAAGAAATCTACCGA GTTCTCAAACCAGGTGGATGGGTGCAACTTTTAGAAATGCAGGGATGGACTTCCGGCCCTGCACTCGCTAAACAT ACGGATCTGCTTTTTAAGTTTTCGGATGATGTGGGGATTATGTATCGTGATATCGCTAAGCGACTACCCGATTTT CTGGAGGAGAGCGGTTTTGCCAATATTCATCAGGACCCCCGTGGTACTCCTCTTGGTGCCTGGGCCGGTACTGAT GGTGTCGACGGGAAGGAGGTTCTCATGGGTGTCTTAGAAGGGCTCAAAACGCCTATTTTGAGAAAGGGTGGTTAT GGTATCATCGAGAGCGAAACCGAGTACGATGCACTGTTAAAAGAAATCTCGGAGGAGTTGGACAACACGCCGGGA TCAGTGGCCAAGTGGACGATGTTCTGGGCACAGAAACCGCTTGAGTAG |
| Transcript | >AgabiH97|030510 ATGATCCAAGCAGGTATCCAGCATACAGTGACTCGCCAGTATACCCAAGTCAAGGGTACAGCGTATTCCTTGCCA CATGACGCAGAAGAACAGCGAAGGTTGACGTTACAGAGCGATGTGTTTCTCCGTGCAACGGATAACAAGGTTCTC CACGCGCCCATCAAACTCAATGACGATGATCGAGTTCTGGAGACTGCTACTGGCACAGGTATTTGGCTTCAGGAC CTAGCAAGAGAGACGCATGCGAAGCCACAGTACACCGGTGTTGATATCGAATCGGCTTTCTTCCCAAAAGCCTCT ACTCTTCCCCCCAATATGCGATTTGAAACCCAATCCGTCACTGCCCTTCCAAGCGAATGGACAAACCACTTTAGT CTCGTTCATCAACGTCTCCTTATTGCTGCGCTCCGCAGGCACGAATGGGGAACGGCTCTCAAAGAAATCTACCGA GTTCTCAAACCAGGTGGATGGGTGCAACTTTTAGAAATGCAGGGATGGACTTCCGGCCCTGCACTCGCTAAACAT ACGGATCTGCTTTTTAAGTTTTCGGATGATGTGGGGATTATGTATCGTGATATCGCTAAGCGACTACCCGATTTT CTGGAGGAGAGCGGTTTTGCCAATATTCATCAGGACCCCCGTGGTACTCCTCTTGGTGCCTGGGCCGGTACTGAT GGTGTCGACGGGAAGGAGGTTCTCATGGGTGTCTTAGAAGGGCTCAAAACGCCTATTTTGAGAAAGGGTGGTTAT GGTATCATCGAGAGCGAAACCGAGTACGATGCACTGTTAAAAGAAATCTCGGAGGAGTTGGACAACACGCCGGGA TCAGTGGCCAAGTGGACGATGTTCTGGGCACAGAAACCGCTTGAGTAG |
| Gene | >AgabiH97|030510 ATGATCCAAGCAGGTATCCAGCATACAGTGACTCGCCAGTATACCCAAGTCAAGGGTACAGCGTATTCCTTGCCA CATGACGCAGAAGAACAGCGAAGGTGAGCAGCTTTAACTATGCATTCATTTCTTCTTTTACTCATTATCGTTGTA AGGTTGACGTTACAGAGCGATGTGTTTCTCCGTGCAACGGATAACAAGGTTCTCCACGCGCCCATCAAACTCAAT GACGATGATCGAGTTCTGGAGACTGCTACTGGCACAGGTAAGAATTCTCTCCTCTCCCAAGTCCAAGGGGGAAGA AAGCTAAATGAGTAATTATCGCCCAATAGGTATTTGGCTTCAGGACCTAGCAAGAGAGACGCATGCGAAGCCACA GTACACCGGTGTTGATATCGAATCGGCTTTCTTCCCAAAAGCCTCTACTCTTCCCCCCAATATGCGATTTGAAAC CCAATCCGTCACTGCCCTTCCAAGCGAATGGACAAACCACTTTAGTCTCGTTCATCAACGTCTCCTTATTGCTGC GCTCCGCAGGCACGAATGGGGAACGGCTCTCAAAGAAATCTACCGAGTTCTCAAACCAGGTGGATGGGTGCAACT TTTAGAAATGCAGGGATGGACTTCCGGCCCTGCACTCGCTAAACATACGGATCTGCTTTTTAAGTTTTCGGATGA TGTGGGGATTATGTATCGTGATATCGCTAAGCGACTACCCGATTTTCTGGAGGAGAGCGGTTTTGCCAATATTCA TCAGGACCCCCGTGGTACTCCTCTTGGTGCCTGGGCCGGTACTGATGGTGTCGACGGGAAGGAGGTTCTCATGGG TGTCTTAGAAGGGCTCAAAACGCCTATTTTGAGAAAGGGTGGTTATGGTATCATCGAGAGCGAAACCGAGTACGA TGCACTGTTAAAAGAAATCTCGGAGGAGTTGGACAACACGCCGGGATCAGTGGCCAAGTGGACGATGTTCTGGGC ACAGAAACCGCTTGAGTAG |