Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|029970
Gene name
Locationscaffold_12:480864..482159
Strand+
Gene length (bp)1295
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 225 247 22
2 259 281 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|029970
MALCWFGLGMARCWTSSNAFGGPSGRLERQSKWSTSCCRNDADTGRSKFGVLTAIKLAFSLTHPPHILFEMRSFA
SIATFATLAFAAVCSALPTANVADVANKLPAGADVAPVAPRGGAGAIIGTYHPHYPRGGEQHKSVLDIIVDVTAE
VKPMCEKLTATISADIEVDAAVKISLEVLADIKVALVAAVADIKAAIHVGVDLLVLNGVTVTVDVVAKIVAELLI
VVLAVIGLVVKVCVSVDISALLKIIVDINVCLSVIVSLVVEISAGLIVVLLPLIGGVLDICVRLHLLDLLKVLAV
VRI*
Coding >AgabiH97|029970
ATGGCACTTTGCTGGTTTGGACTTGGGATGGCTCGTTGTTGGACCTCGTCAAACGCCTTCGGTGGACCGTCAGGA
AGACTGGAGAGGCAAAGCAAGTGGTCTACTTCTTGTTGCCGGAACGATGCGGACACAGGCCGTTCCAAGTTTGGG
GTCTTGACGGCTATAAAACTAGCTTTCAGCTTAACCCACCCCCCCCACATTCTTTTCGAAATGCGTTCTTTTGCC
TCCATCGCTACTTTTGCCACCCTCGCCTTCGCGGCTGTTTGCTCTGCTCTCCCCACTGCCAACGTGGCCGATGTA
GCTAACAAACTTCCTGCTGGTGCTGATGTTGCTCCCGTTGCCCCTCGTGGCGGAGCTGGCGCCATCATCGGTACT
TACCACCCTCACTACCCCCGTGGTGGTGAGCAGCACAAGTCTGTTCTCGATATCATCGTCGATGTCACCGCTGAG
GTGAAGCCGATGTGCGAGAAACTGACTGCTACCATCTCGGCTGATATTGAGGTCGATGCGGCTGTCAAAATCTCT
CTTGAAGTCCTCGCGGACATCAAGGTTGCTCTCGTTGCGGCTGTCGCTGATATCAAGGCTGCTATCCATGTCGGT
GTTGACCTCCTCGTCCTCAACGGTGTCACCGTTACCGTCGATGTTGTTGCTAAGATCGTTGCCGAACTCCTCATC
GTTGTTTTGGCTGTCATTGGATTAGTTGTGAAGGTGTGCGTGTCTGTTGACATCAGCGCCCTCCTCAAGATCATC
GTCGATATCAATGTCTGCCTCTCCGTCATTGTGTCCCTTGTTGTCGAAATCAGCGCCGGTCTCATTGTTGTCCTC
CTCCCTCTCATCGGTGGTGTTCTCGACATCTGTGTCAGGCTGCACCTTTTGGACCTCCTCAAGGTGTTGGCTGTT
GTCCGCATTTAA
Transcript >AgabiH97|029970
ATGGCACTTTGCTGGTTTGGACTTGGGATGGCTCGTTGTTGGACCTCGTCAAACGCCTTCGGTGGACCGTCAGGA
AGACTGGAGAGGCAAAGCAAGTGGTCTACTTCTTGTTGCCGGAACGATGCGGACACAGGCCGTTCCAAGTTTGGG
GTCTTGACGGCTATAAAACTAGCTTTCAGCTTAACCCACCCCCCCCACATTCTTTTCGAAATGCGTTCTTTTGCC
TCCATCGCTACTTTTGCCACCCTCGCCTTCGCGGCTGTTTGCTCTGCTCTCCCCACTGCCAACGTGGCCGATGTA
GCTAACAAACTTCCTGCTGGTGCTGATGTTGCTCCCGTTGCCCCTCGTGGCGGAGCTGGCGCCATCATCGGTACT
TACCACCCTCACTACCCCCGTGGTGGTGAGCAGCACAAGTCTGTTCTCGATATCATCGTCGATGTCACCGCTGAG
GTGAAGCCGATGTGCGAGAAACTGACTGCTACCATCTCGGCTGATATTGAGGTCGATGCGGCTGTCAAAATCTCT
CTTGAAGTCCTCGCGGACATCAAGGTTGCTCTCGTTGCGGCTGTCGCTGATATCAAGGCTGCTATCCATGTCGGT
GTTGACCTCCTCGTCCTCAACGGTGTCACCGTTACCGTCGATGTTGTTGCTAAGATCGTTGCCGAACTCCTCATC
GTTGTTTTGGCTGTCATTGGATTAGTTGTGAAGGTGTGCGTGTCTGTTGACATCAGCGCCCTCCTCAAGATCATC
GTCGATATCAATGTCTGCCTCTCCGTCATTGTGTCCCTTGTTGTCGAAATCAGCGCCGGTCTCATTGTTGTCCTC
CTCCCTCTCATCGGTGGTGTTCTCGACATCTGTGTCAGGCTGCACCTTTTGGACCTCCTCAAGGTGTTGGCTGTT
GTCCGCATTTAA
Gene >AgabiH97|029970
ATGGCACTTTGCTGGTTTGGACTTGGGATGGCTCGTTGTTGGACCTCGTCAAACGCCTTCGGTGGACCGTCAGGA
AGACTGGAGAGGCAAAGCAAGTGTAGGGAAATTTTAATGACTTAATAATAGGTCTTAGCCGTCAACTGGCCGTCA
GGGTAGGACGAAAATACTTGCAGGGTCTACTTCTTGTTGCGTAAATATTCATCGAAGTCAGTCAAACCAGCCTGG
CTAAACGCAAATTTTTTGATCATTCGTGCGGCATTAAACATTCTAGCGGAACGATGCGGACACAGGCCGTTCCAA
GTTTGGGGTCTTGACGGCTATAAAACTAGGTGTGTTGCAGTTCTTCATACCCAGCCAACTCTTCCAGTTAGCATC
AACTACTTCCCCTACAACAGCTTTCAGCTTAACCCACCCCCCCCACATTCTTTTCGAAATGCGTTCTTTTGCCTC
CATCGCTACTTTTGCCACCCTCGCCTTCGCGGCTGTTTGCTCTGCTCTCCCCACTGCCAACGTGGCCGATGTAGC
TAACAAACTTGTGAGTTTTATTTTGGTCTTGTAATGTCTTGTTTCTCAACGTTCAATTATTTAGCCTGCTGGTGC
TGATGTTGCTCCCGTTGCCCCTCGTGGCGGAGCTGGCGCCATCATCGGTACTTACCACCCTCACTACCCCCGTGG
TGGTGAGCAGCACAAGTCTGTTCTCGATATCATCGTCGATGTCACCGCTGAGGTGAAGCCGATGTGCGAGAAACT
GAGTGAGTTAAAGTCTTTCGTAACTGCTTGTAAAATTTTATTAATGTCGGTATCAAGCTGCTACCATCTCGGCTG
ATATTGAGGTCGATGCGGCTGTCAAAATCTCTCTTGAAGTCCTCGCGGACATCAAGGTTGCTCTCGTTGCGGCTG
TCGCTGATATCAAGGCTGCTATCCATGTCGGTGTTGACCTCCTCGTCCTCAACGGTGTCACCGTTACCGTCGATG
TTGTTGCTAAGATCGTTGCCGAACTCCTCATCGTACGTTGGATTTGGCTCTAGTGTGGGATTTGTGACTAACTCT
TGGCGCAGGTTGTTTTGGCTGTCATTGGATTAGTTGTGAAGGTGTGCGTGTCTGTTGACATCAGCGCCCTCCTCA
AGATCATCGTCGATATCAATGTCTGCCTCTCCGTCATTGTGTCCCTTGTTGTCGAAATCAGCGCCGGTCTCATTG
TTGTCCTCCTCCCTCTCATCGGTGGTGTTCTCGACATCTGTGTCAGGCTGCACCTTTTGGACCTCCTCAAGGTGT
TGGCTGTTGTCCGCATTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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