Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|028350
Gene name
Location	scaffold_12:56557..57807
Strand	-
Gene length (bp)	1250
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12849	PBP_like_2	PBP superfamily domain	2.1E-08	61	264

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|028350 MKTTLRFYALLAVLSAPLAVVQAQSSTSDSLMPAAVYNGGHNGTTKVGLRIANGGAGQSGLIGAWGDAFINYMVG KGHEPFTVEWYLGDTTQSIEYLEKGQVDVAVTYNEAAERQVYDSELVSAWLYGFHDHFYFVGPPSNPAQLSTNDS ILAMARRIVQVGNQQAAVPPTNGTVTRFLSRYDKSATNIKESEIFIKIGQVPWAYAYSKWYHQYPRFPIQALEAA SLLSEYTLTDRGTWLSSSPDVRSRLTIFKAGTDNETDILLNPARVLIAKEDNLVDKEIGQAFGKWVVLYDEQNKT GGQNVIETFTGTGQTGETKEPLYTRAPVNWSPANSTAGQ*
Coding	>AgabiH97\|028350 ATGAAAACCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT AGTACTTCTGACTCTTTGATGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGTCTACGT ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT AAAGGCCATGAACCTTTTACCGTGGAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGT CAGGTAGATGTTGCTGTGACCTACAATGAGGCTGCGGAACGGCAGGTCTACGATTCTGAGCTGGTGTCCGCTTGG CTCTACGGTTTTCATGATCATTTCTATTTTGTCGGACCTCCGAGTAACCCAGCCCAACTTTCCACCAACGATTCT ATTCTTGCCATGGCGCGTAGGATCGTCCAGGTCGGAAATCAACAAGCTGCAGTCCCACCAACCAATGGCACTGTC ACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATTAAGGAAAGCGAGATTTTCATCAAGATCGGCCAA GTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAGCTGCC TCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGTTCCCCAGACGTTCGATCGAGGTTG ACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCAAAGAA GACAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTAAATGGGTGGTTTTGTATGATGAACAGAACAAGACT GGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTTTGTATACCCGC GCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG
Transcript	>AgabiH97\|028350 ATGAAAACCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT AGTACTTCTGACTCTTTGATGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGTCTACGT ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT AAAGGCCATGAACCTTTTACCGTGGAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGT CAGGTAGATGTTGCTGTGACCTACAATGAGGCTGCGGAACGGCAGGTCTACGATTCTGAGCTGGTGTCCGCTTGG CTCTACGGTTTTCATGATCATTTCTATTTTGTCGGACCTCCGAGTAACCCAGCCCAACTTTCCACCAACGATTCT ATTCTTGCCATGGCGCGTAGGATCGTCCAGGTCGGAAATCAACAAGCTGCAGTCCCACCAACCAATGGCACTGTC ACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATTAAGGAAAGCGAGATTTTCATCAAGATCGGCCAA GTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAGCTGCC TCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGTTCCCCAGACGTTCGATCGAGGTTG ACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCAAAGAA GACAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTAAATGGGTGGTTTTGTATGATGAACAGAACAAGACT GGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTTTGTATACCCGC GCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG
Gene	>AgabiH97\|028350 ATGAAAACCACACTCAGGTTTTATGCATTGCTAGCGGTCCTCTCTGCCCCCCTTGCTGTGGTTCAAGCCCAGTCT AGTACTTCTGACTCTTTGATGCCTGCAGCTGTCTATAATGGCGGTCATAATGGTACAACAAAAGTTGGTCTACGT ATTGCTAACGGAGGCGCTGGACAGTCGGGGCTAATTGGCGCCTGGGGCGACGCGTTTATCAACTACATGGTCGGT AAAGGCCATGAACCTTTTACCGTGAGTCTATCCGTTAGGTTTATTAAGACTGTTAATGACAATTGCTGTTAGGTG GAGTGGTATCTGGGCGATACGACCCAGAGTATTGAGTATTTGGAGAAAGGTCAGGTAGATGTTGCTGTGACCTAC AATGAGGCTGCGGAACGGCAGGTCTACGATTCTGAGCTGGTGTCCGCTTGGCTCTACGGTTTTCATGTGAGTACT AGTACTGACGTCATATTTGACATCACATTTTGACGTTCTACGTCTAGGATCATTTCTATTTTGTCGGACCTCCGA GTAACCCAGCCCAACTTTCCACCAACGATTCTATTCTTGCCATGGCGCGTAGGATCGTCCAGGTCGGAAATCAAC AAGCTGCAGTAAGATACTTTTTCCATGAATATATGAAATTTAAACTTATGCTATTCGAACTCGCGTTAGGTCCCA CCAACCAATGGCACTGTCACCCGTTTTCTTTCTCGGTATGACAAAAGTGCCACGAACATTAAGGAAAGCGAGATT TTCATCAAGATCGGCCAAGTGAGTTTTCCAAAAAGAACTATGGGATGTCAAAATGGCTGACATTCTTCCTTGGAC CTTAGGTTCCATGGGCTTATGCCTACTCGAAATGGTACCATCAATACCCGCGTTTCCCCATTCAAGCACTTGAAG CTGCCTCCCTTCTGAGTGAATATACGCTCACCGACCGTGGAACATGGCTATCGAGTTCCCCAGACGTTCGATCGA GGTTGACGATTTTCAAAGCCGGAACTGATAACGAGACGGATATATTATTGAATCCCGCTCGCGTTTTGATCGCCA AAGAAGACAATCTGGTTGATAAAGAAATTGGTCAAGCTTTTGGTAAATGGGTGGTTTTGTATGATGAACAGAACA AGACTGGTGGGCAGAATGTGATTGAGACTTTCACGGGAACTGGACAGACTGGAGAAACGAAGGAGCCTTTGTATA CCCGCGCACCAGTGAACTGGTCTCCTGCCAATTCGACAGCTGGCCAGTAG

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