Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|027560
Gene name
Locationscaffold_11:1567445..1568701
Strand-
Gene length (bp)1256
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 7 133 7.0E-12
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 175 276 3.0E-09
sp|D4B3I5|A3024_ARTBC Extracellular serine-rich protein ARB_03024 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03024 PE=1 SV=1 23 136 9.0E-08
sp|P0DN32|CUPR1_ARTBC Probable GPI-anchored cupredoxin ARB_05732-1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05732-1 PE=1 SV=1 168 276 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|027560
MIFNIALLAIGITGAYSQTTHTVQVGPSGSLVFDPPTVSAAVGDVVRYCFHPKAHSVTQSNFGTPCQFNGGFDSD
LTPIPADSADCQHPFDVPVPDEKPIWFYCKQPTGLHCQHGMVGAINAPETGNTFANFQAAALALLNSTTTTAAPS
ASITPPPAGSDAPPPPPAAPVTHTITVGADNLKKFEPNNITAAVNDVVRFHFVSKNHTSTQSSLNDPCTTLEGPD
GTPLFDTGFQVINPSNPNQVTFDFMVNDTKPKWGYCQQVGHCGSGMVWAINGGEKFDQFLQNALALGNSTNSTTG
GSNPAAGANSTTSGGTTDTSGALSTKSVSWAMIGLFAATMATL*
Coding >AgabiH97|027560
ATGATCTTCAATATTGCTCTTCTCGCCATTGGTATAACTGGCGCATACTCTCAAACGACGCATACCGTTCAAGTT
GGTCCGAGCGGTTCGTTGGTTTTCGATCCTCCTACTGTTTCCGCGGCTGTGGGTGATGTCGTGCGATACTGCTTC
CATCCCAAAGCCCACTCGGTTACTCAGTCCAACTTTGGCACTCCCTGTCAATTTAACGGAGGGTTCGACTCTGAT
TTAACCCCTATTCCCGCTGATTCTGCAGATTGCCAACACCCGTTCGATGTCCCGGTTCCAGATGAGAAGCCTATC
TGGTTTTACTGTAAACAACCGACCGGATTGCATTGTCAGCATGGAATGGTTGGAGCTATTAACGCTCCCGAAACG
GGTAACACGTTCGCCAATTTCCAAGCTGCGGCATTAGCTTTGTTGAATTCGACGACAACCACTGCTGCTCCATCG
GCTTCGATTACTCCTCCACCTGCTGGTTCCGATGCCCCTCCTCCACCGCCTGCTGCTCCTGTCACCCATACTATT
ACTGTTGGCGCTGATAATTTGAAGAAGTTTGAGCCTAATAATATTACGGCGGCTGTGAATGATGTAGTCCGTTTC
CACTTCGTTTCGAAGAACCATACGTCTACTCAGTCGAGTTTGAATGACCCTTGTACGACTCTTGAGGGTCCGGAT
GGTACTCCACTTTTCGATACCGGATTCCAAGTCATCAACCCGAGTAACCCCAACCAAGTCACCTTTGACTTCATG
GTCAACGACACCAAACCCAAATGGGGATACTGTCAGCAAGTCGGTCATTGTGGATCAGGAATGGTTTGGGCTATC
AACGGTGGTGAAAAATTCGATCAATTCCTTCAAAATGCTTTAGCTTTGGGTAATTCTACCAATTCTACTACTGGT
GGATCTAACCCGGCGGCTGGTGCAAATTCTACTACGTCGGGAGGTACGACTGATACTTCTGGAGCTTTGTCGACG
AAGAGTGTTTCGTGGGCTATGATCGGATTGTTCGCCGCTACAATGGCTACGCTTTGA
Transcript >AgabiH97|027560
ATGATCTTCAATATTGCTCTTCTCGCCATTGGTATAACTGGCGCATACTCTCAAACGACGCATACCGTTCAAGTT
GGTCCGAGCGGTTCGTTGGTTTTCGATCCTCCTACTGTTTCCGCGGCTGTGGGTGATGTCGTGCGATACTGCTTC
CATCCCAAAGCCCACTCGGTTACTCAGTCCAACTTTGGCACTCCCTGTCAATTTAACGGAGGGTTCGACTCTGAT
TTAACCCCTATTCCCGCTGATTCTGCAGATTGCCAACACCCGTTCGATGTCCCGGTTCCAGATGAGAAGCCTATC
TGGTTTTACTGTAAACAACCGACCGGATTGCATTGTCAGCATGGAATGGTTGGAGCTATTAACGCTCCCGAAACG
GGTAACACGTTCGCCAATTTCCAAGCTGCGGCATTAGCTTTGTTGAATTCGACGACAACCACTGCTGCTCCATCG
GCTTCGATTACTCCTCCACCTGCTGGTTCCGATGCCCCTCCTCCACCGCCTGCTGCTCCTGTCACCCATACTATT
ACTGTTGGCGCTGATAATTTGAAGAAGTTTGAGCCTAATAATATTACGGCGGCTGTGAATGATGTAGTCCGTTTC
CACTTCGTTTCGAAGAACCATACGTCTACTCAGTCGAGTTTGAATGACCCTTGTACGACTCTTGAGGGTCCGGAT
GGTACTCCACTTTTCGATACCGGATTCCAAGTCATCAACCCGAGTAACCCCAACCAAGTCACCTTTGACTTCATG
GTCAACGACACCAAACCCAAATGGGGATACTGTCAGCAAGTCGGTCATTGTGGATCAGGAATGGTTTGGGCTATC
AACGGTGGTGAAAAATTCGATCAATTCCTTCAAAATGCTTTAGCTTTGGGTAATTCTACCAATTCTACTACTGGT
GGATCTAACCCGGCGGCTGGTGCAAATTCTACTACGTCGGGAGGTACGACTGATACTTCTGGAGCTTTGTCGACG
AAGAGTGTTTCGTGGGCTATGATCGGATTGTTCGCCGCTACAATGGCTACGCTTTGA
Gene >AgabiH97|027560
ATGATCTTCAATATTGCTCTTCTCGCCATTGGTATAACTGGCGCATACTCTCAAACGACGCATACCGTTCAAGTT
GGTCCGAGCGGTTCGTTGGTTTTCGATCCTCCTACTGTTTCCGCGGCTGTGGGTGATGTCGTGCGATACTGCTTG
TAAGTTGATTTCCCAAATTCTTACGATTCTCTTGTGTTTAGTTTTGTCTTTAGCCATCCCAAAGCCCACTCGGTT
ACTCAGTCCAACTTTGGCACTCCCTGTCAATTTAACGGAGGGTTCGACTCTGATTTGTGAGTCCCTATCTGTCTT
AGTTGGGCGCGTAATAACGATTTTGTTAGAACCCCTATTCCCGCTGATTCTGCAGATTGCCAACACCCGTTCGAT
GTCCCGGTTCCAGATGAGAAGCCTATCTGGTTTTACTGTAAACAACCGACCGGATTGCATTGTCAGCATGGTAAG
TTGTCCGTCATCAGTAGAAATATCGCGTTATATTCAATATTTTTATTTTTTCATAGGAATGGTTGGAGCTATTAA
CGCTCCCGAAACGGGTAACACGTTCGCCAATTTCCAAGCTGCGGCATTAGCTTTGTTGAATTCGACGACAACCAC
TGCTGCTCCATCGGCTTCGATTACTCCTCCACCTGCTGGTTCCGATGCCCCTCCTCCACCGCCTGCTGCTCCTGT
CACCCATACTATTACTGTTGGCGCTGATAATTTGAAGAAGTTTGAGCCTAATAATATTACGGCGGCTGTGAATGA
TGTAGTCCGTTTCCACTTCGTTTCGAAGAACCATACGTCTACTCAGTCGAGTTTGAATGACCCTTGTACGACTCT
TGAGGGTCCGGATGGTACTCCACTTTTCGATACCGGATTGTACGTTTCTTTTTTCGCTTCCTTACAAAGTGATTG
AACTCTTTCTTTTTTTTTCTAATAGCCAAGTCATCAACCCGAGTAACCCCAACCAAGTCACCTTTGACTTCATGG
TCAACGACACCAAACCCAAATGGGGATACTGTCAGCAAGTCGGTCATTGTGGATCAGGAATGGTTTGGGCTATCA
ACGGTGGTGAAAAATTCGATCAATTCCTTCAAAATGCTTTAGCTTTGGGTAATTCTACCAATTCTACTACTGGTG
GATCTAACCCGGCGGCTGGTGCAAATTCTACTACGTCGGGAGGTACGACTGATACTTCTGGAGCTTTGTCGACGA
AGAGTGTTTCGTGGGCTATGATCGGATTGTTCGCCGCTACAATGGCTACGCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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