Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|027530
Gene name
Locationscaffold_11:1557875..1558612
Strand+
Gene length (bp)737
Transcript length (bp)618
Coding sequence length (bp)618
Protein length (aa) 206

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 2 24 22
2 44 66 22
3 87 109 22
4 124 143 19
5 168 190 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|027530
MLIIYVVFTLVLATATEVAEIFVTLDGILDDVCFFQGLQPPTPYLGLFAITVWLTNITTDGLFVWRCYTLCGGLR
GQRGWSTLLWAMPLGVYIVMICTGTNIIIGFAAYNTREVISDVLLPLQYGISGFLNALVTICIIVLILRHRRATL
EAFGENHQMPYLNVMTMLIESASLVVVIDIFAVAGYIQGILSNVAMQVWIPLQVS*
Coding >AgabiH97|027530
ATGTTGATCATATACGTGGTGTTCACACTTGTCCTGGCGACTGCGACGGAAGTTGCTGAGATTTTTGTGACGCTC
GACGGCATATTGGACGACGTCTGCTTCTTTCAGGGTTTGCAGCCACCAACTCCATACCTTGGACTCTTTGCTATC
ACTGTATGGTTGACTAATATCACGACAGACGGACTCTTTGTCTGGAGGTGCTACACTCTTTGTGGAGGTTTACGG
GGTCAGAGAGGTTGGTCCACTCTATTATGGGCAATGCCATTGGGTGTCTACATCGTGATGATCTGCACCGGTACC
AATATCATCATTGGGTTCGCTGCATATAATACACGTGAAGTAATTTCCGATGTGCTCCTCCCACTCCAATACGGT
ATAAGCGGTTTCTTAAACGCCTTAGTCACTATATGCATCATTGTTCTCATCCTGCGTCATCGTCGTGCCACTCTC
GAAGCTTTTGGAGAAAACCATCAAATGCCTTACCTCAACGTAATGACAATGTTGATCGAATCAGCAAGTTTGGTC
GTCGTCATTGATATATTCGCAGTTGCGGGTTATATCCAAGGTATTTTGTCGAATGTTGCGATGCAAGTTTGGATT
CCTTTACAGGTGAGCTAG
Transcript >AgabiH97|027530
ATGTTGATCATATACGTGGTGTTCACACTTGTCCTGGCGACTGCGACGGAAGTTGCTGAGATTTTTGTGACGCTC
GACGGCATATTGGACGACGTCTGCTTCTTTCAGGGTTTGCAGCCACCAACTCCATACCTTGGACTCTTTGCTATC
ACTGTATGGTTGACTAATATCACGACAGACGGACTCTTTGTCTGGAGGTGCTACACTCTTTGTGGAGGTTTACGG
GGTCAGAGAGGTTGGTCCACTCTATTATGGGCAATGCCATTGGGTGTCTACATCGTGATGATCTGCACCGGTACC
AATATCATCATTGGGTTCGCTGCATATAATACACGTGAAGTAATTTCCGATGTGCTCCTCCCACTCCAATACGGT
ATAAGCGGTTTCTTAAACGCCTTAGTCACTATATGCATCATTGTTCTCATCCTGCGTCATCGTCGTGCCACTCTC
GAAGCTTTTGGAGAAAACCATCAAATGCCTTACCTCAACGTAATGACAATGTTGATCGAATCAGCAAGTTTGGTC
GTCGTCATTGATATATTCGCAGTTGCGGGTTATATCCAAGGTATTTTGTCGAATGTTGCGATGCAAGTTTGGATT
CCTTTACAGGTGAGCTAG
Gene >AgabiH97|027530
ATGTTGATCATATACGTGGTGTTCACACTTGTCCTGGCGACTGCGACGGAAGTTGCTGAGATTTTTGTGACGCTC
GACGGCATATTGGACGACGTCTGCTTCTTTCAGGGTTTGCAGCCACCAACTCCATACCTTGGACTCTTTGCTATC
ACTGTATGGTTGACTAATATCACGACAGACGGACTCTTTGTGAGAATTTTGAATTGCGAGTTCATGATTGATTTA
CTGACCATGGCTGTGGCAGGTCTGGAGGTGCTACACTCTTTGTGGAGGTTTACGGGGTCAGAGAGGTTGGTCCAC
TCTATTATGGGCAATGCCATTGGGTGTCTACATCGTGATGATCTGTGAGTCGCTTGAAATACACAGGATGATGTA
TAACCGTTAAACCTTGATCTTTGGTTATTGAAGGCACCGGTACCAATATCATCATTGGGTTCGCTGCATATAATA
CACGTGAAGTAATTTCCGATGTGCTCCTCCCACTCCAATACGGTATAAGCGGTTTCTTAAACGCCTTAGTCACTA
TATGCATCATTGTTCTCATCCTGCGTCATCGTCGTGCCACTCTCGAAGCTTTTGGAGAAAACCATCAAATGCCTT
ACCTCAACGTAATGACAATGTTGATCGAATCAGCAAGTTTGGTCGTCGTCATTGATATATTCGCAGTTGCGGGTT
ATATCCAAGGTATTTTGTCGAATGTTGCGATGCAAGTTTGGATTCCTTTACAGGTGAGCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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