Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|027250
Gene name
Locationscaffold_11:1474979..1476400
Strand+
Gene length (bp)1421
Transcript length (bp)1368
Coding sequence length (bp)1368
Protein length (aa) 456

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|027250
MAFFPTCATYVLYLVALLRVLAAKVLGHSKREARRRSTRSRRSTLDKHDLEANITTTSAIELGLNTLGKYEKDTK
MTDSDLEFEAFIGQVKLPIDDSRKPAICEDHILPLYHIPSPKSPSVPLLDPLSETQPPPYHQVSLNNPDDVSSRI
MEASGFRGYEEPTNGRMIFARGLQFTENNNFQFPASFFSSLRSRSPKSQRRFRMKPKVNQIPANAIPVYLVKRSS
MSNTNNNTPRRRSNSNNGTLPTTPTTPGSPNLPLSPFPASNPSGSSLASSCANTPTHEIDMASLPSWRRDPNRAK
FIFGSLAKGASTAGVISSSSSSNSSSPSSPTRVGRGNGKKGVVIVESVVGERASQIVAESGFEVGFENVIIGMGL
TPPPTPTHAPISAMTPPSSIAAPATVTADTAPPPSPSANTSKLKVESGKKSGRGTSSSRRSRESIMKDVLSWVQN
SSLAV*
Coding >AgabiH97|027250
ATGGCTTTCTTCCCGACTTGTGCGACTTACGTTCTCTACCTGGTTGCCTTACTTCGGGTGCTCGCTGCGAAGGTT
CTTGGACACTCCAAAAGAGAGGCTAGGAGGCGGTCTACTCGGTCTAGGCGGTCTACACTTGATAAGCATGACTTG
GAGGCGAACATCACTACTACTTCTGCTATCGAACTAGGCTTGAATACTCTGGGGAAATACGAAAAGGACACAAAG
ATGACAGATTCTGATCTCGAGTTCGAAGCCTTCATCGGACAAGTCAAGCTTCCTATCGACGATTCTAGAAAACCC
GCTATCTGCGAGGACCATATATTACCGCTCTATCATATTCCATCACCCAAGTCACCTTCTGTGCCTCTACTGGAT
CCGCTCTCGGAAACTCAGCCTCCTCCGTATCACCAAGTCAGCCTCAACAATCCCGATGACGTCTCCTCTCGGATT
ATGGAAGCCTCCGGCTTCCGGGGCTATGAAGAACCGACGAATGGGCGAATGATATTCGCAAGGGGTCTTCAATTC
ACCGAAAATAACAATTTCCAATTTCCTGCTAGCTTCTTTTCGTCGCTTCGATCGAGATCTCCCAAATCACAACGT
CGCTTCAGAATGAAACCTAAAGTCAATCAGATTCCAGCCAACGCTATACCCGTCTACTTGGTGAAACGATCCTCG
ATGAGTAATACGAATAACAATACTCCCCGGCGTAGATCAAACAGCAATAACGGAACTTTACCAACGACGCCGACA
ACACCTGGATCACCTAATCTTCCATTGTCACCATTTCCTGCATCCAACCCTTCCGGGTCTTCACTTGCCTCGTCT
TGCGCCAATACACCCACACATGAAATCGATATGGCTAGTTTACCCAGCTGGCGAAGGGATCCTAATCGAGCGAAA
TTCATTTTCGGATCTCTTGCTAAAGGTGCTAGTACCGCTGGCGTTATTTCTTCTTCCTCGTCTTCGAATAGTTCA
TCACCGTCGTCGCCAACACGTGTTGGAAGAGGAAATGGCAAAAAAGGCGTTGTTATAGTTGAGAGTGTGGTTGGT
GAACGTGCTTCACAAATCGTCGCGGAAAGTGGATTCGAAGTTGGATTTGAGAATGTGATTATTGGTATGGGTTTG
ACTCCACCGCCGACACCTACACATGCTCCTATTTCTGCTATGACACCTCCGAGTTCTATTGCTGCTCCGGCTACT
GTTACTGCTGATACGGCCCCTCCTCCATCTCCTTCCGCGAATACTTCGAAACTCAAGGTTGAAAGCGGCAAGAAA
TCTGGTCGCGGTACATCTAGTTCAAGGAGGAGTCGCGAATCGATCATGAAGGATGTGTTATCTTGGGTTCAGAAT
TCTTCTCTTGCAGTATGA
Transcript >AgabiH97|027250
ATGGCTTTCTTCCCGACTTGTGCGACTTACGTTCTCTACCTGGTTGCCTTACTTCGGGTGCTCGCTGCGAAGGTT
CTTGGACACTCCAAAAGAGAGGCTAGGAGGCGGTCTACTCGGTCTAGGCGGTCTACACTTGATAAGCATGACTTG
GAGGCGAACATCACTACTACTTCTGCTATCGAACTAGGCTTGAATACTCTGGGGAAATACGAAAAGGACACAAAG
ATGACAGATTCTGATCTCGAGTTCGAAGCCTTCATCGGACAAGTCAAGCTTCCTATCGACGATTCTAGAAAACCC
GCTATCTGCGAGGACCATATATTACCGCTCTATCATATTCCATCACCCAAGTCACCTTCTGTGCCTCTACTGGAT
CCGCTCTCGGAAACTCAGCCTCCTCCGTATCACCAAGTCAGCCTCAACAATCCCGATGACGTCTCCTCTCGGATT
ATGGAAGCCTCCGGCTTCCGGGGCTATGAAGAACCGACGAATGGGCGAATGATATTCGCAAGGGGTCTTCAATTC
ACCGAAAATAACAATTTCCAATTTCCTGCTAGCTTCTTTTCGTCGCTTCGATCGAGATCTCCCAAATCACAACGT
CGCTTCAGAATGAAACCTAAAGTCAATCAGATTCCAGCCAACGCTATACCCGTCTACTTGGTGAAACGATCCTCG
ATGAGTAATACGAATAACAATACTCCCCGGCGTAGATCAAACAGCAATAACGGAACTTTACCAACGACGCCGACA
ACACCTGGATCACCTAATCTTCCATTGTCACCATTTCCTGCATCCAACCCTTCCGGGTCTTCACTTGCCTCGTCT
TGCGCCAATACACCCACACATGAAATCGATATGGCTAGTTTACCCAGCTGGCGAAGGGATCCTAATCGAGCGAAA
TTCATTTTCGGATCTCTTGCTAAAGGTGCTAGTACCGCTGGCGTTATTTCTTCTTCCTCGTCTTCGAATAGTTCA
TCACCGTCGTCGCCAACACGTGTTGGAAGAGGAAATGGCAAAAAAGGCGTTGTTATAGTTGAGAGTGTGGTTGGT
GAACGTGCTTCACAAATCGTCGCGGAAAGTGGATTCGAAGTTGGATTTGAGAATGTGATTATTGGTATGGGTTTG
ACTCCACCGCCGACACCTACACATGCTCCTATTTCTGCTATGACACCTCCGAGTTCTATTGCTGCTCCGGCTACT
GTTACTGCTGATACGGCCCCTCCTCCATCTCCTTCCGCGAATACTTCGAAACTCAAGGTTGAAAGCGGCAAGAAA
TCTGGTCGCGGTACATCTAGTTCAAGGAGGAGTCGCGAATCGATCATGAAGGATGTGTTATCTTGGGTTCAGAAT
TCTTCTCTTGCAGTATGA
Gene >AgabiH97|027250
ATGGCTTTCTTCCCGACTTGTGCGACTTACGTTCTCTACCTGGTTGCCTTACTTCGGGTGCTCGCTGCGAAGGTT
CTTGGACACTCCAAAAGAGAGGCTAGGAGGCGGTCTACTCGGTCTAGGCGGTCTACACTTGATAAGCATGACTTG
GAGGCGAACATCACTACTACTTCTGCTATCGAACTAGGCTTGAATACTCTGGGGAAATACGAAAAGGACACAAAG
ATGACAGATTCTGATCTCGAGTTCGAAGCCTTCATCGGACAAGTCAAGCTTCCTATCGACGATTCTAGAAAACCC
GCTATCTGCGAGGACCATATATTACCGCTCTATCATATTCCATCACCCAAGTCACCTTCTGTGCCTCTACTGGAT
CCGCTCTCGGAAACTCAGCCTCCTCCGTATCACCAAGTCAGCCTCAACAATCCCGATGACGTCTCCTCTCGGATT
ATGGAAGCCTCCGGCTTCCGGGGCTATGAAGAACCGACGAATGGGCGAATGATATTCGCAAGGGGTCTTCAATTC
ACCGAAAATAACAGTACGCACTTGAATCTCTCCTTTCTCACATACAATCATTCCGTTTTTTTTTAGATTTCCAAT
TTCCTGCTAGCTTCTTTTCGTCGCTTCGATCGAGATCTCCCAAATCACAACGTCGCTTCAGAATGAAACCTAAAG
TCAATCAGATTCCAGCCAACGCTATACCCGTCTACTTGGTGAAACGATCCTCGATGAGTAATACGAATAACAATA
CTCCCCGGCGTAGATCAAACAGCAATAACGGAACTTTACCAACGACGCCGACAACACCTGGATCACCTAATCTTC
CATTGTCACCATTTCCTGCATCCAACCCTTCCGGGTCTTCACTTGCCTCGTCTTGCGCCAATACACCCACACATG
AAATCGATATGGCTAGTTTACCCAGCTGGCGAAGGGATCCTAATCGAGCGAAATTCATTTTCGGATCTCTTGCTA
AAGGTGCTAGTACCGCTGGCGTTATTTCTTCTTCCTCGTCTTCGAATAGTTCATCACCGTCGTCGCCAACACGTG
TTGGAAGAGGAAATGGCAAAAAAGGCGTTGTTATAGTTGAGAGTGTGGTTGGTGAACGTGCTTCACAAATCGTCG
CGGAAAGTGGATTCGAAGTTGGATTTGAGAATGTGATTATTGGTATGGGTTTGACTCCACCGCCGACACCTACAC
ATGCTCCTATTTCTGCTATGACACCTCCGAGTTCTATTGCTGCTCCGGCTACTGTTACTGCTGATACGGCCCCTC
CTCCATCTCCTTCCGCGAATACTTCGAAACTCAAGGTTGAAAGCGGCAAGAAATCTGGTCGCGGTACATCTAGTT
CAAGGAGGAGTCGCGAATCGATCATGAAGGATGTGTTATCTTGGGTTCAGAATTCTTCTCTTGCAGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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