© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|027020 |
| Gene name | |
| Location | scaffold_11:1388993..1390546 |
| Strand | + |
| Gene length (bp) | 1553 |
| Transcript length (bp) | 1149 |
| Coding sequence length (bp) | 1149 |
| Protein length (aa) | 383 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01435 | Peptidase_M48 | Peptidase family M48 | 4.3E-30 | 176 | 340 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 66 | 344 | 7.0E-48 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 38 | 364 | 1.0E-40 |
| sp|D3ZS74|OMA1_RAT | Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus GN=Oma1 PE=3 SV=1 | 76 | 347 | 2.0E-19 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 57 | 347 | 2.0E-19 |
| sp|Q9D8H7|OMA1_MOUSE | Metalloendopeptidase OMA1, mitochondrial OS=Mus musculus GN=Oma1 PE=1 SV=1 | 26 | 347 | 1.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9P7G4|OMA1_SCHPO | Mitochondrial metalloendopeptidase OMA1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oma1 PE=3 SV=1 | 66 | 344 | 7.0E-48 |
| sp|P36163|OMA1_YEAST | Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OMA1 PE=1 SV=2 | 38 | 364 | 1.0E-40 |
| sp|D3ZS74|OMA1_RAT | Metalloendopeptidase OMA1, mitochondrial OS=Rattus norvegicus GN=Oma1 PE=3 SV=1 | 76 | 347 | 2.0E-19 |
| sp|Q3SZN3|OMA1_BOVIN | Metalloendopeptidase OMA1, mitochondrial OS=Bos taurus GN=OMA1 PE=2 SV=2 | 57 | 347 | 2.0E-19 |
| sp|Q9D8H7|OMA1_MOUSE | Metalloendopeptidase OMA1, mitochondrial OS=Mus musculus GN=Oma1 PE=1 SV=1 | 26 | 347 | 1.0E-18 |
| sp|Q96E52|OMA1_HUMAN | Metalloendopeptidase OMA1, mitochondrial OS=Homo sapiens GN=OMA1 PE=1 SV=1 | 57 | 347 | 5.0E-18 |
| sp|E9QBI7|OMA1_DANRE | Metalloendopeptidase OMA1, mitochondrial OS=Danio rerio GN=oma1 PE=3 SV=1 | 56 | 349 | 2.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008237 | metallopeptidase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003824 | catalytic activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0008233 | peptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 60 | 82 | 22 |
| 2 | 243 | 265 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|027020 MPSWRVSSMFRPLLTASRLTYRIPKRELWTTIPKRNRYVRFSDGNAGRPSPNNQPGWRKFSPPVTYGAVIFAGIG VFYVTHLEQVPQTGRWRFMIFSSRSEAQIGESVRQETKNEWGNKILPPNHPLSLHVRKVTSRILKSSDLGHIIGE APTPPPISPFGFADEVWKPSDDYGAAASYTYSPQKEWDVVVVNDKRVVNAMATPGLILVFTGILPVCRDEQGLAA VLSHEIGHVVARHSAERLSSGAFFMAISFFLQITGLDVIGFTPFINHFLLELPNSRTQEYEADLIGVRLMSRACY DPAEMVQMFKRLEAATGSNRVDFLATHPSTGQRIKQLEETLPDAYSILASNPECAALRDKLEQFGNRTMPIRVND FGEIEHV* |
| Coding | >AgabiH97|027020 ATGCCGAGTTGGCGCGTCTCTTCCATGTTCAGACCACTTTTGACTGCCTCAAGACTTACTTATCGTATACCCAAA AGAGAACTATGGACAACCATTCCGAAACGCAATCGTTATGTTCGCTTCTCTGACGGAAATGCCGGCCGACCTTCG CCGAATAATCAGCCTGGGTGGCGCAAGTTCAGCCCACCAGTCACATACGGTGCTGTAATCTTTGCTGGTATAGGC GTCTTCTATGTAACACATTTAGAACAGGTACCTCAGACTGGCCGGTGGCGCTTTATGATCTTCAGTAGTAGATCT GAAGCTCAGATCGGCGAAAGTGTACGTCAGGAAACGAAAAACGAATGGGGTAATAAGATCCTACCCCCCAACCAT CCATTATCCCTTCATGTGCGAAAGGTCACATCTCGCATTCTAAAGTCGTCCGACCTTGGTCATATTATAGGAGAA GCTCCTACACCTCCGCCAATTTCCCCTTTCGGTTTCGCAGACGAAGTCTGGAAGCCGTCAGACGACTACGGCGCG GCTGCAAGTTATACGTATAGTCCTCAGAAAGAATGGGATGTTGTAGTTGTAAATGATAAAAGAGTGGTCAACGCG ATGGCTACACCTGGCTTGATTCTGGTATTTACTGGGATATTACCTGTATGTCGCGATGAGCAGGGACTCGCTGCT GTTTTATCACATGAAATCGGTCATGTAGTTGCTCGCCATTCAGCCGAGCGTCTATCCTCAGGCGCATTCTTCATG GCTATCTCATTCTTTTTACAGATCACTGGGCTTGATGTTATTGGTTTCACACCCTTCATCAATCATTTCCTCCTC GAGCTCCCCAATTCCCGCACACAAGAATATGAAGCTGATCTCATCGGTGTTCGACTTATGTCTCGTGCTTGCTAT GATCCTGCTGAGATGGTACAGATGTTTAAACGCCTCGAAGCGGCCACAGGATCCAACAGAGTAGACTTTCTAGCA ACTCATCCATCAACTGGCCAACGCATCAAGCAACTTGAAGAAACGCTTCCGGATGCATATTCTATTCTTGCCTCA AATCCGGAATGTGCAGCTTTAAGAGATAAATTAGAACAATTTGGGAATCGCACGATGCCAATTCGGGTTAATGAC TTTGGAGAAATAGAACATGTGTAA |
| Transcript | >AgabiH97|027020 ATGCCGAGTTGGCGCGTCTCTTCCATGTTCAGACCACTTTTGACTGCCTCAAGACTTACTTATCGTATACCCAAA AGAGAACTATGGACAACCATTCCGAAACGCAATCGTTATGTTCGCTTCTCTGACGGAAATGCCGGCCGACCTTCG CCGAATAATCAGCCTGGGTGGCGCAAGTTCAGCCCACCAGTCACATACGGTGCTGTAATCTTTGCTGGTATAGGC GTCTTCTATGTAACACATTTAGAACAGGTACCTCAGACTGGCCGGTGGCGCTTTATGATCTTCAGTAGTAGATCT GAAGCTCAGATCGGCGAAAGTGTACGTCAGGAAACGAAAAACGAATGGGGTAATAAGATCCTACCCCCCAACCAT CCATTATCCCTTCATGTGCGAAAGGTCACATCTCGCATTCTAAAGTCGTCCGACCTTGGTCATATTATAGGAGAA GCTCCTACACCTCCGCCAATTTCCCCTTTCGGTTTCGCAGACGAAGTCTGGAAGCCGTCAGACGACTACGGCGCG GCTGCAAGTTATACGTATAGTCCTCAGAAAGAATGGGATGTTGTAGTTGTAAATGATAAAAGAGTGGTCAACGCG ATGGCTACACCTGGCTTGATTCTGGTATTTACTGGGATATTACCTGTATGTCGCGATGAGCAGGGACTCGCTGCT GTTTTATCACATGAAATCGGTCATGTAGTTGCTCGCCATTCAGCCGAGCGTCTATCCTCAGGCGCATTCTTCATG GCTATCTCATTCTTTTTACAGATCACTGGGCTTGATGTTATTGGTTTCACACCCTTCATCAATCATTTCCTCCTC GAGCTCCCCAATTCCCGCACACAAGAATATGAAGCTGATCTCATCGGTGTTCGACTTATGTCTCGTGCTTGCTAT GATCCTGCTGAGATGGTACAGATGTTTAAACGCCTCGAAGCGGCCACAGGATCCAACAGAGTAGACTTTCTAGCA ACTCATCCATCAACTGGCCAACGCATCAAGCAACTTGAAGAAACGCTTCCGGATGCATATTCTATTCTTGCCTCA AATCCGGAATGTGCAGCTTTAAGAGATAAATTAGAACAATTTGGGAATCGCACGATGCCAATTCGGGTTAATGAC TTTGGAGAAATAGAACATGTGTAA |
| Gene | >AgabiH97|027020 ATGCCGAGTTGGCGCGTCTCTTCCATGTTCAGACCACTTTTGACTGCCTCAAGACTTACTTATCGTATACCCAAA AGAGAACTATGGACAACCATTCCGAAACGCAATCGTTATGTTCGCTTCTCTGACGGAAATGCCGGCCGACCTTCG CCGAATAATCAGCCTGGGTGGCGCAAGTTCAGCCCACCAGTCACATACGGTGCTGTAATCTTTGCTGGTATAGGC GTCTTCTATGTAACACAGTGCGCTTTTTTTTGCTGCTCGAGTTGAAAGCTTCTCTCAATTTACAAAGTTTAGAAC AGGTACCTCAGACTGGCCGGTGGCGCTTTATGATCTTCAGTAGTAGATCTGAAGCTCAGGTATACAGCTCTTCTT CTTCATTCGCAAGCAACCTTAACGTGTAGTTTAGATCGGCGAAAGTGTACGTCAGGAAACGAAAAACGAATGGGG TAATAAGATCCTACCCCCCAACCATCCATTATCCCTTCATGTGCGAAAGGTCACATCTCGCATTCTAAAGTCGTC CGACCTTGGTCATATTATAGGAGAAGCTCCTACACCTCCGCCAATTTCCCCTTTCGGTTTCGCAGACGAAGTCTG GAAGCCGTCAGACGACTACGGCGCGGCTGCAAGTTATACGTATAGTCCTCAGAAAGAATGGGATGTTGTAGTTGT AAATGATAAAAGAGTGGTCAACGCGATGGCTACACCTGGTAGGTTGCATCATAAGGTCCTTGTGATTATCGGGAA CTTACCGCTTTCTAGGCTTGATTCTGGTATTTACTGGGATATTACCTGTATGTCGCGATGAGCAGGGACTCGCTG CTGTTTTATCACATGGTCCGCTCTCCTCCTAGACCACTTGATGCCCACCTCTCTTATCATCTTGTCCAGAAATCG GTCATGTAGTTGCTCGCCATTCAGCCGAGCGTCTATCCTCAGGCGCATTCTTCATGGCTATCTCATTCTTTTTAC AGATCACTGGGCTTGATGTTATTGGTTTCACACCCTTCATCAATCATTTCCTCCTCGAGCTCCCCAATTCCCGCA CACAAGAATATGAAGGTAATATTGATCCTTTTCAATCACCTTTTCGTAATGTTAATACATCGTTGACATTTCGTT TAGCTGATCTCATCGGTGTTCGACTTATGTCTCGTGCTTGCTATGATCCTGCTGAGATGGTACAGTACGTTACTT TTCCATCATGGCCAACGGATCAATCATTAACTCATATTACTCGCCTTCAAATTAACAGGATGTTTAAACGCCTCG AAGCGGCCACAGGATCCAACAGAGTAGACTTTCTAGCAACTCATCCATCAACTGGCCAACGCATCAAGGTTAGAC AACTGAACTCCATGAAAGTCTCAAAAGAGTCCTCACTCATTCTTTTTCTTTCATTATAGCAACTTGAAGAAACGC TTCCGGATGCATATTCTATTCTTGCCTCAAATCCGGAATGTGCAGCTTTAAGAGATAAATTAGAACAATTTGGGA ATCGCACGATGCCAATTCGGGTTAATGACTTTGGAGAAATAGAACATGTGTAA |