Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|026980
Gene name
Locationscaffold_11:1380873..1382223
Strand+
Gene length (bp)1350
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 266 288 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|026980
MPFSIRLPTFIVSILGLQALGQNSRLTFEWNFGGDVVGWSLPICQEIPITVSPDHLNATAGNFAGIPPYYMIAFP
QNGLQPTTRFVGNNTDTLTWTPTHPVGTTFMLQLMDSTGSTGGATDIWKVTKSTTGNTDCAAPPPPAYFFVSSNM
TEDGERTLETCEPWRLNINGGEPPYTVVLTATNSPVLTNVTVPEGNNALVYVNRADPNTVLFAGAVDRFGRWATG
TQSIKTSGSTDYTCIGFRTIATTQEELDILNPKEFKRKRRLLAIACISAGLFSLMLVVGGFGISSNLRQKKLTKR
KHLKLVSDNRHSLSSLSLSQTQSSSLAT*
Coding >AgabiH97|026980
ATGCCTTTCTCAATCAGATTACCAACCTTTATCGTTTCGATCCTTGGTCTGCAAGCGTTGGGACAAAATTCTAGA
TTAACGTTTGAGTGGAATTTTGGCGGCGACGTTGTCGGTTGGTCCTTACCGATATGTCAGGAAATTCCTATCACT
GTCTCCCCTGATCACCTCAACGCGACTGCCGGAAATTTCGCTGGCATCCCACCATATTATATGATCGCTTTTCCT
CAAAATGGACTCCAACCTACCACTAGATTTGTAGGAAACAACACTGACACGCTGACATGGACTCCGACTCACCCT
GTTGGAACGACTTTCATGTTACAGCTAATGGATTCCACAGGGAGCACAGGCGGTGCCACCGATATATGGAAAGTC
ACCAAAAGCACTACTGGCAATACTGACTGCGCCGCCCCTCCACCTCCTGCCTACTTCTTCGTCTCCTCAAATATG
ACTGAGGATGGTGAGAGAACCCTGGAGACATGTGAACCTTGGAGATTAAATATAAATGGCGGAGAGCCTCCCTAT
ACGGTCGTGCTTACGGCCACTAACAGTCCTGTGTTGACGAATGTCACTGTACCGGAAGGCAACAATGCGTTGGTT
TATGTTAACCGTGCTGACCCAAATACTGTCCTCTTTGCCGGTGCAGTCGACAGGTTCGGGCGATGGGCTACTGGA
ACGCAATCTATCAAAACTAGTGGATCAACAGACTATACTTGTATTGGTTTCAGGACCATAGCTACCACACAAGAA
GAACTCGATATACTCAATCCGAAAGAATTCAAGCGTAAAAGGCGCCTTCTAGCAATTGCTTGCATTAGTGCCGGA
TTGTTTTCGCTCATGCTGGTCGTTGGAGGATTCGGGATTTCGTCGAATTTACGACAGAAGAAGTTGACAAAAAGG
AAACATCTGAAATTAGTCAGCGATAATCGTCATTCTCTTTCGTCTCTTTCTCTATCACAGACTCAATCGTCGTCG
CTTGCTACATGA
Transcript >AgabiH97|026980
ATGCCTTTCTCAATCAGATTACCAACCTTTATCGTTTCGATCCTTGGTCTGCAAGCGTTGGGACAAAATTCTAGA
TTAACGTTTGAGTGGAATTTTGGCGGCGACGTTGTCGGTTGGTCCTTACCGATATGTCAGGAAATTCCTATCACT
GTCTCCCCTGATCACCTCAACGCGACTGCCGGAAATTTCGCTGGCATCCCACCATATTATATGATCGCTTTTCCT
CAAAATGGACTCCAACCTACCACTAGATTTGTAGGAAACAACACTGACACGCTGACATGGACTCCGACTCACCCT
GTTGGAACGACTTTCATGTTACAGCTAATGGATTCCACAGGGAGCACAGGCGGTGCCACCGATATATGGAAAGTC
ACCAAAAGCACTACTGGCAATACTGACTGCGCCGCCCCTCCACCTCCTGCCTACTTCTTCGTCTCCTCAAATATG
ACTGAGGATGGTGAGAGAACCCTGGAGACATGTGAACCTTGGAGATTAAATATAAATGGCGGAGAGCCTCCCTAT
ACGGTCGTGCTTACGGCCACTAACAGTCCTGTGTTGACGAATGTCACTGTACCGGAAGGCAACAATGCGTTGGTT
TATGTTAACCGTGCTGACCCAAATACTGTCCTCTTTGCCGGTGCAGTCGACAGGTTCGGGCGATGGGCTACTGGA
ACGCAATCTATCAAAACTAGTGGATCAACAGACTATACTTGTATTGGTTTCAGGACCATAGCTACCACACAAGAA
GAACTCGATATACTCAATCCGAAAGAATTCAAGCGTAAAAGGCGCCTTCTAGCAATTGCTTGCATTAGTGCCGGA
TTGTTTTCGCTCATGCTGGTCGTTGGAGGATTCGGGATTTCGTCGAATTTACGACAGAAGAAGTTGACAAAAAGG
AAACATCTGAAATTAGTCAGCGATAATCGTCATTCTCTTTCGTCTCTTTCTCTATCACAGACTCAATCGTCGTCG
CTTGCTACATGA
Gene >AgabiH97|026980
ATGCCTTTCTCAATCAGATTACCAACCTTTATCGTTTCGATCCTTGGTCTGCAAGCGTTGGGACAAAATTCTAGA
TTAACGTTTGAGTGGAATTTTGGCGGCGACGTTGTGAGTCCATTTTATTTCCTCAGTCACTGACCAAGTACCAGT
AATACTAATTACCAGATCCTAGGTCGGTTGGTCCTTACCGATATGTCAGGAAATTCCTATCACTGTCTCCCCTGA
TCACCTCAACGCGACTGCCGGAAATTTCGCTGGCATCCCACCATATTATATGATCGCTTTTCCTCAAAATGGACT
CCAACCTACCACTAGATTTGTAGGAAACAACACTGACACGCTGACATGGACTCCGACTCACCCTGTTGGTCAGTG
ACGTGCGTAACAAGGAATTGCAATTACTTATGAAAGATACTCTAGGAACGACTTTCATGTTACAGCTAATGGATT
CCACAGGGAGCACAGGCGGTGCCACCGATATATGGAAAGTCACCAAAAGTGAGTTTCTGAATGGATCTGACTCAA
CGAATATTAATGTGAAGTCGATTGGGAAAGGCACTACTGGCAATACTGACTGCGCCGCCCCTCCACCTCCTGCCT
ACTTCTTCGTCTCCTCAAATATGACTGAGGATGGTGAGAGAACCCTGGAGACATGTGAACCTTGGAGATTAAATA
TAAATGGCGGAGAGCCTCCCTATACGGTCGTGCTTACGGCCACTAACAGTCCTGTGTTGACGAATGTCACTGTAC
CGGAAGGCAACAATGCGTTGGTTTATGTTAACCGTGCTGACCCAAATACTGTCCTCTTTGGTATGTACCACTATT
ACTCTTTATATATTATAGCTTGACGATCATACTCATTCTCGCTGTAGCCGGTGCAGTCGACAGGTGAGCTGTCAA
TTCGAGAAGAAAAAAGAAATGACAATTGGATAAAACATAAATTTTTCTAGGTTCGGGCGATGGGCTACTGGAACG
CAATCTATCAAAACTAGTGGTGAGAATACCGACCTAATCGACATACTGTGAATTCTTAAATTTCTTCGCCCTATA
ATGGTTTTAGGATCAACAGACTATACTTGTATTGGTTTCAGGACCATAGCTACCACACAAGAAGAACTCGATATA
CTCAATCCGAAAGAATTCAAGCGTAAAAGGCGCCTTCTAGCAATTGCTTGCATTAGTGCCGGATTGTTTTCGCTC
ATGCTGGTCGTTGGAGGATTCGGGATTTCGTCGAATTTACGACAGAAGAAGTTGACAAAAAGGAAACATCTGAAA
TTAGTCAGCGATAATCGTCATTCTCTTTCGTCTCTTTCTCTATCACAGACTCAATCGTCGTCGCTTGCTACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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