© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|026870 |
| Gene name | |
| Location | scaffold_11:1355207..1356159 |
| Strand | + |
| Gene length (bp) | 952 |
| Transcript length (bp) | 852 |
| Coding sequence length (bp) | 852 |
| Protein length (aa) | 284 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00481 | PP2C | Protein phosphatase 2C | 2.3E-08 | 77 | 233 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9LUS8|P2C40_ARATH | Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 | 12 | 234 | 1.0E-07 |
| sp|Q7XVF9|P2C39_ORYSJ | Probable protein phosphatase 2C 39 OS=Oryza sativa subsp. japonica GN=Os04g0403701 PE=2 SV=2 | 30 | 234 | 5.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004722 | protein serine/threonine phosphatase activity | Yes |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0003674 | molecular_function | No |
| GO:0016791 | phosphatase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0004721 | phosphoprotein phosphatase activity | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|026870 MALPHVHSLQRAEVDAGYCSIETVSVPSDGHIRNEDRVTWLFTWYGVIIAVFDGHYGQTASEYAKSHLLNHIHER VSHDISRNNFENVESTLRTAIIDFDASLMKAILQKLQEFSSSKSLPLSDWSMERDTQDFLGMKENGENDPYPVNR RAAEGTTVLLSLLVKQDSGYEAWTVSLGDSDGFIIDQNHTSTIISEQHGAQNPKEVDPLIEEHPDDPDAVLHSRV KGQLAVTRGKYTLALSLSSNLPTYLPPSFRGRYLEGRQTIRACSFLSMGNAYSLDNGR* |
| Coding | >AgabiH97|026870 ATGGCCTTACCGCATGTCCATAGCCTTCAGCGAGCGGAAGTCGATGCTGGGTATTGCTCGATCGAGACTGTATCG GTACCGTCTGACGGCCACATACGCAACGAAGACAGGGTAACTTGGCTTTTCACCTGGTATGGCGTGATTATAGCG GTATTTGACGGGCACTATGGTCAAACAGCTTCGGAGTATGCCAAGAGTCACTTGCTGAATCACATTCACGAGCGC GTTTCGCACGACATCTCCCGCAACAATTTTGAAAACGTGGAGTCTACGCTTAGGACTGCCATTATAGATTTCGAT GCATCGCTTATGAAAGCAATTCTTCAAAAACTACAAGAGTTCTCTTCCAGCAAGTCTCTGCCTCTTTCAGACTGG TCAATGGAACGAGATACTCAGGATTTCCTGGGTATGAAGGAAAATGGAGAGAATGATCCGTACCCTGTAAATCGA AGGGCTGCGGAAGGTACCACCGTTCTGCTCTCTCTTCTCGTCAAACAAGATTCTGGTTATGAAGCCTGGACTGTT TCTCTTGGTGATTCAGATGGCTTTATAATCGATCAAAACCATACTTCAACCATTATCAGCGAGCAACACGGCGCC CAGAATCCGAAAGAAGTGGACCCTCTTATTGAAGAACATCCAGATGACCCTGACGCTGTTTTGCATTCCCGTGTC AAAGGACAGTTGGCAGTTACCAGAGGCAAGTACACCTTGGCACTTTCATTGTCGAGTAATCTTCCGACGTATCTT CCCCCTAGCTTTAGGGGACGCTATCTTGAAGGTCGACAAACCATACGCGCATGCTCTTTCTTGTCTATGGGGAAT GCCTATTCATTGGACAACGGTCGATAA |
| Transcript | >AgabiH97|026870 ATGGCCTTACCGCATGTCCATAGCCTTCAGCGAGCGGAAGTCGATGCTGGGTATTGCTCGATCGAGACTGTATCG GTACCGTCTGACGGCCACATACGCAACGAAGACAGGGTAACTTGGCTTTTCACCTGGTATGGCGTGATTATAGCG GTATTTGACGGGCACTATGGTCAAACAGCTTCGGAGTATGCCAAGAGTCACTTGCTGAATCACATTCACGAGCGC GTTTCGCACGACATCTCCCGCAACAATTTTGAAAACGTGGAGTCTACGCTTAGGACTGCCATTATAGATTTCGAT GCATCGCTTATGAAAGCAATTCTTCAAAAACTACAAGAGTTCTCTTCCAGCAAGTCTCTGCCTCTTTCAGACTGG TCAATGGAACGAGATACTCAGGATTTCCTGGGTATGAAGGAAAATGGAGAGAATGATCCGTACCCTGTAAATCGA AGGGCTGCGGAAGGTACCACCGTTCTGCTCTCTCTTCTCGTCAAACAAGATTCTGGTTATGAAGCCTGGACTGTT TCTCTTGGTGATTCAGATGGCTTTATAATCGATCAAAACCATACTTCAACCATTATCAGCGAGCAACACGGCGCC CAGAATCCGAAAGAAGTGGACCCTCTTATTGAAGAACATCCAGATGACCCTGACGCTGTTTTGCATTCCCGTGTC AAAGGACAGTTGGCAGTTACCAGAGGCAAGTACACCTTGGCACTTTCATTGTCGAGTAATCTTCCGACGTATCTT CCCCCTAGCTTTAGGGGACGCTATCTTGAAGGTCGACAAACCATACGCGCATGCTCTTTCTTGTCTATGGGGAAT GCCTATTCATTGGACAACGGTCGATAA |
| Gene | >AgabiH97|026870 ATGGCCTTACCGCATGTCCATAGCCTTCAGCGAGCGGAAGTCGATGCTGGGTATTGCTCGATCGAGACTGTATCG GTACCGTCTGACGGCCACATACGCAACGAAGACAGGGTAACTTGGCTTTTCACCTGGTATGGCGTGATTATAGCG GTATTTGACGGTTCGTGTGGGGTTCGGACGATTGCTTTTCATGTTATTCAGAATCTTTCAGGGCACTATGGTCAA ACAGCTTCGGAGTATGCCAAGAGTCACTTGCTGAATCACATTCACGAGCGCGTTTCGCACGACATCTCCCGCAAC AATTTTGAAAACGTGGAGTCTACGCTTAGGACTGCCATTATAGATTTCGATGCATCGCTTATGAAAGCAATTCTT CAAAAACTACAAGAGTTCTCTTCCAGCAAGTCTCTGCCTCTTTCAGACTGGTCAATGGAACGAGATACTCAGGAT TTCCTGGGTATGAAGGAAAATGGAGAGAATGATCCGTACCCTGTAAATCGAAGGGCTGCGGAAGGTACCACCGTT CTGCTCTCTCTTCTCGTCAAACAAGATTCTGGTTATGAAGCCTGGACTGTTTCTCTTGGTGATTCAGATGGCTGT GAGTTGTTGAATATGCGCGATTAATATTAACAAATATTGTCGCCTAGTTATAATCGATCAAAACCATACTTCAAC CATTATCAGCGAGCAACACGGCGCCCAGAATCCGAAAGAAGTGGACCCTCTTATTGAAGAACATCCAGATGACCC TGACGCTGTTTTGCATTCCCGTGTCAAAGGACAGTTGGCAGTTACCAGAGGCAAGTACACCTTGGCACTTTCATT GTCGAGTAATCTTCCGACGTATCTTCCCCCTAGCTTTAGGGGACGCTATCTTGAAGGTCGACAAACCATACGCGC ATGCTCTTTCTTGTCTATGGGGAATGCCTATTCATTGGACAACGGTCGATAA |