Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|026860
Gene name
Locationscaffold_11:1351271..1352500
Strand-
Gene length (bp)1229
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00481 PP2C Protein phosphatase 2C 3.7E-16 49 298
PF13672 PP2C_2 Protein phosphatase 2C 1.4E-05 31 305

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 155 353 1.0E-12
sp|Q7XVF9|P2C39_ORYSJ Probable protein phosphatase 2C 39 OS=Oryza sativa subsp. japonica GN=Os04g0403701 PE=2 SV=2 133 307 9.0E-12
sp|Q12511|PDP1_YEAST [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 48 337 2.0E-11
sp|Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 178 302 6.0E-08
sp|O88484|PDP2_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 198 298 9.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 155 353 1.0E-12
sp|Q7XVF9|P2C39_ORYSJ Probable protein phosphatase 2C 39 OS=Oryza sativa subsp. japonica GN=Os04g0403701 PE=2 SV=2 133 307 9.0E-12
sp|Q12511|PDP1_YEAST [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 48 337 2.0E-11
sp|Q9ZV25|P2C23_ARATH Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 178 302 6.0E-08
sp|O88484|PDP2_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 198 298 9.0E-08
sp|Q9P2J9|PDP2_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 194 298 2.0E-07
sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 191 307 2.0E-07
sp|Q84T94|P2C35_ORYSJ Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 190 302 2.0E-07
sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 97 298 2.0E-07
sp|Q10NB9|P2C31_ORYSJ Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1 186 302 3.0E-07
sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 194 352 3.0E-07
sp|Q9SR24|P2C36_ARATH Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1 194 302 6.0E-07
sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1 173 298 1.0E-06
sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 191 298 2.0E-06
sp|Q9LZ86|P2C66_ARATH Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1 197 302 3.0E-06
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GO

GO Term Description Terminal node
GO:0004722 protein serine/threonine phosphatase activity Yes
GO:0140096 catalytic activity, acting on a protein No
GO:0003674 molecular_function No
GO:0016791 phosphatase activity No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004721 phosphoprotein phosphatase activity No
GO:0042578 phosphoric ester hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 36 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|026860
MVTEHIHSLQRAEVDAGYCSIETVSVPSDSHECNEDRVTWLFTWYGVILAVFDGHYGPVTSEYAKNHLLNLVHER
VSHDITRKNLDNVESTLRAAIIDFDAALIGNILQRLDDFSSTESRPFSNWTMDDDTPEFLGMKENGENDPYAVNR
RAAEGTTVLLSLLVKQDSGYEAWTASLGDSDGFTIDRNHTATIVSEQHGAQNPKEVDRLVKEHPGDPDTILYSRV
KGQLAITRALGNAILKVDKLYARVLSRMWGTPVHWTTVDGWTNHSPPYILSNPDIKRHQVRETDLLVFASDGLRA
AFRTSSIELGNVISRIAGESSNPGLASRIMDEARRCAQGKLVDDVTILVFRVGKV*
Coding >AgabiH97|026860
ATGGTCACGGAACATATCCATAGCCTTCAGCGAGCGGAAGTTGATGCTGGATATTGCTCAATCGAGACTGTATCG
GTACCATCTGACAGCCACGAATGTAACGAAGATAGGGTAACTTGGCTTTTCACCTGGTATGGTGTAATCTTAGCG
GTTTTTGACGGGCACTATGGTCCCGTTACTTCGGAGTATGCCAAGAATCACTTGCTGAATCTCGTCCACGAGCGC
GTTTCGCATGACATCACCCGTAAAAACCTCGACAACGTAGAATCTACGCTCAGGGCTGCCATTATAGATTTCGAT
GCTGCGCTCATAGGAAATATCCTTCAAAGACTGGACGATTTCTCTTCCACTGAGTCTCGACCTTTTTCGAATTGG
ACAATGGATGATGATACTCCGGAATTCCTTGGTATGAAAGAAAATGGAGAAAATGATCCATATGCTGTAAACCGA
AGGGCTGCGGAAGGTACCACCGTTCTTCTCTCTCTTCTCGTCAAACAAGATTCGGGCTATGAAGCTTGGACTGCT
TCTCTTGGTGACTCAGATGGCTTTACAATCGATCGAAACCATACCGCAACCATTGTCAGCGAGCAGCACGGCGCC
CAGAATCCGAAAGAAGTGGATCGTCTTGTGAAGGAACATCCGGGTGATCCTGACACGATCTTATATTCACGCGTT
AAAGGACAGCTGGCGATCACCAGAGCTTTGGGGAATGCTATCTTGAAGGTCGACAAATTATACGCACGTGTTCTT
TCTCGTATGTGGGGCACACCAGTTCACTGGACAACGGTCGATGGTTGGACAAACCACTCCCCTCCCTACATTCTC
TCTAATCCAGATATCAAACGACACCAAGTACGCGAGACGGACCTTCTTGTATTTGCTTCCGATGGCCTTCGCGCG
GCATTTAGAACGTCTTCTATCGAATTAGGAAATGTTATATCTCGCATTGCCGGTGAATCTAGCAATCCAGGGCTA
GCGTCAAGAATCATGGATGAAGCACGCCGTTGTGCGCAAGGCAAGCTGGTGGATGATGTTACTATCTTGGTTTTT
CGAGTGGGGAAAGTGTAA
Transcript >AgabiH97|026860
ATGGTCACGGAACATATCCATAGCCTTCAGCGAGCGGAAGTTGATGCTGGATATTGCTCAATCGAGACTGTATCG
GTACCATCTGACAGCCACGAATGTAACGAAGATAGGGTAACTTGGCTTTTCACCTGGTATGGTGTAATCTTAGCG
GTTTTTGACGGGCACTATGGTCCCGTTACTTCGGAGTATGCCAAGAATCACTTGCTGAATCTCGTCCACGAGCGC
GTTTCGCATGACATCACCCGTAAAAACCTCGACAACGTAGAATCTACGCTCAGGGCTGCCATTATAGATTTCGAT
GCTGCGCTCATAGGAAATATCCTTCAAAGACTGGACGATTTCTCTTCCACTGAGTCTCGACCTTTTTCGAATTGG
ACAATGGATGATGATACTCCGGAATTCCTTGGTATGAAAGAAAATGGAGAAAATGATCCATATGCTGTAAACCGA
AGGGCTGCGGAAGGTACCACCGTTCTTCTCTCTCTTCTCGTCAAACAAGATTCGGGCTATGAAGCTTGGACTGCT
TCTCTTGGTGACTCAGATGGCTTTACAATCGATCGAAACCATACCGCAACCATTGTCAGCGAGCAGCACGGCGCC
CAGAATCCGAAAGAAGTGGATCGTCTTGTGAAGGAACATCCGGGTGATCCTGACACGATCTTATATTCACGCGTT
AAAGGACAGCTGGCGATCACCAGAGCTTTGGGGAATGCTATCTTGAAGGTCGACAAATTATACGCACGTGTTCTT
TCTCGTATGTGGGGCACACCAGTTCACTGGACAACGGTCGATGGTTGGACAAACCACTCCCCTCCCTACATTCTC
TCTAATCCAGATATCAAACGACACCAAGTACGCGAGACGGACCTTCTTGTATTTGCTTCCGATGGCCTTCGCGCG
GCATTTAGAACGTCTTCTATCGAATTAGGAAATGTTATATCTCGCATTGCCGGTGAATCTAGCAATCCAGGGCTA
GCGTCAAGAATCATGGATGAAGCACGCCGTTGTGCGCAAGGCAAGCTGGTGGATGATGTTACTATCTTGGTTTTT
CGAGTGGGGAAAGTGTAA
Gene >AgabiH97|026860
ATGGTCACGGAACATATCCATAGCCTTCAGCGAGCGGAAGTTGATGCTGGATATTGCTCAATCGAGACTGTATCG
GTACCATCTGACAGCCACGAATGTAACGAAGATAGGGTAACTTGGCTTTTCACCTGGTATGGTGTAATCTTAGCG
GTTTTTGACGGTTCGTATGAGTTTGAATAATTGCATTTCACATTATTAAGATTTTGTCAGGGCACTATGGTCCCG
TTACTTCGGAGTATGCCAAGAATCACTTGCTGAATCTCGTCCACGAGCGCGTTTCGCATGACATCACCCGTAAAA
ACCTCGACAACGTAGAATCTACGCTCAGGGCTGCCATTATAGATTTCGATGCTGCGCTCATAGGAAATATCCTTC
AAAGACTGGACGATTTCTCTTCCACTGAGTCTCGACCTTTTTCGAATTGGACAATGGATGATGATACTCCGGAAT
TCCTTGGTATGAAAGAAAATGGAGAAAATGATCCATATGCTGTAAACCGAAGGGCTGCGGAAGGTACCACCGTTC
TTCTCTCTCTTCTCGTCAAACAAGATTCGGGCTATGAAGCTTGGACTGCTTCTCTTGGTGACTCAGATGGCTGTG
AGTTGTTCAATATGCTCAATTAAGTCTGACCAAATATCATCACTTAGTTACAATCGATCGAAACCATACCGCAAC
CATTGTCAGCGAGCAGCACGGCGCCCAGAATCCGAAAGAAGTGGATCGTCTTGTGAAGGAACATCCGGGTGATCC
TGACACGATCTTATATTCACGCGTTAAAGGACAGCTGGCGATCACCAGAGGCAAGTACACCTTGGCCCATTCATC
GACGATTAATCTTACAACGCGACATCTTCCCATCAGCTTTGGGGAATGCTATCTTGAAGGTCGACAAATTATACG
CACGTGTTCTTTCTCGTATGTGGGGCACACCAGTTCACTGGACAACGGTCGATGGTTGGACAAACCACTCCCCTC
CCTACATTCTCTCTAATCCAGATATCAAACGACACCAAGTACGCGAGACGGACCTTCTTGTATTTGCTTCCGATG
GCCTTCGCGCGGCATTTAGAACGTCTTCTATCGAATTAGGAAATGTTATATCTCGCATTGCCGGTGAATCTAGCA
ATCCAGGGCTAGCGTCAAGAATCATGGATGAAGCACGCCGTTGTGCGCAAGGCAAGCTGGTGGATGATGTTACTA
TCTTGGTTTTTCGAGTGGGGAAAGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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