Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|026650
Gene name
Locationscaffold_11:1300647..1302107
Strand+
Gene length (bp)1460
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12929 Mid1 Stretch-activated Ca2+-permeable channel component 2.1E-48 99 441

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P41821|MID1_YEAST Stretch-activated cation channel MID1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MID1 PE=1 SV=1 172 441 1.0E-17
sp|Q10063|EHS1_SCHPO Calcium influx-promoting protein ehs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ehs1 PE=3 SV=1 213 436 3.0E-15

GO

GO Term Description Terminal node
GO:0098703 calcium ion import across plasma membrane Yes
GO:0005262 calcium channel activity Yes
GO:0034220 ion transmembrane transport No
GO:0022857 transmembrane transporter activity No
GO:0015267 channel activity No
GO:0006816 calcium ion transport No
GO:0006810 transport No
GO:0098660 inorganic ion transmembrane transport No
GO:0070588 calcium ion transmembrane transport No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0098655 cation transmembrane transport No
GO:0099587 inorganic ion import across plasma membrane No
GO:0008150 biological_process No
GO:0030001 metal ion transport No
GO:0005261 cation channel activity No
GO:0051234 establishment of localization No
GO:0046873 metal ion transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0098739 import across plasma membrane No
GO:0051179 localization No
GO:0098659 inorganic cation import across plasma membrane No
GO:0006811 ion transport No
GO:0022803 passive transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0015085 calcium ion transmembrane transporter activity No
GO:0009987 cellular process No
GO:0008324 cation transmembrane transporter activity No
GO:0097553 calcium ion transmembrane import into cytosol No
GO:0055085 transmembrane transport No
GO:0098662 inorganic cation transmembrane transport No
GO:0006812 cation transport No
GO:0003674 molecular_function No
GO:0005216 ion channel activity No
GO:0098657 import into cell No
GO:0015318 inorganic molecular entity transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|026650
MLLLCLLSLLLATHAQQLRLSLNTVTRFDSSSSSFTVPPQDQLSISIALCSPSTPPRVIISTDDLDVHEVILKDG
FGLFTGSFEKGGTITLDGLSPGASFELGLSTNGPLHEIVSRDPLFGDSTNNQAILFSHPFAFPPPTPPPQFPNYT
LPAANATLPDPPSSLPNLTLIVSQTSNTPLLRTSCFLNSSAVKAEGKIINSSSWLRSPEDGWRTEYLLAGLEPQT
NYTAFVIQDDYKVSGPIYFFTKSTSFHCTLVHSLPYCPATSYSIPLSPPSTSIGQFPIYDTTSLPRQLQDTFIRT
LQNFTVALLTFACGRDFYSPVVGCEECQKEYRKWLCTVVFPRCTEPSPGNPDFVVWDSSLNGVVNAQLPGSQTVV
SALLPMPSSSSSSTKQTPFMNQAYMKLLPCIETCTSVDRACPPFLQFRCPNSMFNGAASYGFGYMDGGGLDGRWR
GGVVDSAQDGWGNVWCNEG*
Coding >AgabiH97|026650
ATGCTCCTGCTCTGTCTGCTCTCTCTCCTCCTCGCCACGCACGCACAGCAGCTGCGACTCTCCCTCAACACCGTC
ACTCGCTTCGACTCTTCCTCCTCCTCCTTCACTGTCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGA
TTCGGTCTCTTTACCGGATCATTTGAGAAGGGCGGGACCATCACACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGCCCCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAAT
AACCAAGCCATCCTCTTTTCCCACCCCTTCGCCTTTCCTCCTCCCACTCCCCCTCCTCAATTCCCCAATTACACT
TTACCAGCAGCAAATGCTACACTACCAGACCCTCCTTCTTCACTCCCAAACCTCACTCTCATCGTTTCGCAAACA
TCCAACACTCCCCTACTCCGCACATCCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGCAAAATCATCAAC
AGCTCATCGTGGTTACGGAGTCCAGAAGACGGTTGGAGGACTGAATATCTATTGGCTGGATTAGAACCTCAAACC
AATTATACCGCTTTTGTCATTCAAGATGATTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCA
TTTCATTGTACACTCGTGCATTCTCTACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGC
ACCTCCATCGGCCAATTTCCAATATACGATACCACGTCGTTACCTCGACAACTACAAGACACCTTTATACGCACT
TTACAAAATTTTACGGTGGCTCTTTTGACATTTGCGTGTGGAAGAGATTTTTATTCTCCCGTTGTGGGATGTGAA
GAATGTCAAAAGGAATATCGGAAATGGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAAT
CCTGATTTTGTGGTTTGGGATTCGAGTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTA
TCTGCTTTGTTACCTATGCCTTCCTCATCTTCCTCATCAACGAAGCAAACACCGTTTATGAATCAAGCATATATG
AAATTGTTACCCTGTATAGAAACATGTACGTCTGTCGATCGAGCATGTCCACCTTTTCTTCAATTTAGATGTCCG
AATTCGATGTTTAATGGGGCGGCGAGTTATGGGTTTGGGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGAGG
GGGGGGGTTGTGGATAGTGCGCAGGATGGGTGGGGGAATGTGTGGTGTAATGAGGGGTAG
Transcript >AgabiH97|026650
ATGCTCCTGCTCTGTCTGCTCTCTCTCCTCCTCGCCACGCACGCACAGCAGCTGCGACTCTCCCTCAACACCGTC
ACTCGCTTCGACTCTTCCTCCTCCTCCTTCACTGTCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGA
TTCGGTCTCTTTACCGGATCATTTGAGAAGGGCGGGACCATCACACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGCCCCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAAT
AACCAAGCCATCCTCTTTTCCCACCCCTTCGCCTTTCCTCCTCCCACTCCCCCTCCTCAATTCCCCAATTACACT
TTACCAGCAGCAAATGCTACACTACCAGACCCTCCTTCTTCACTCCCAAACCTCACTCTCATCGTTTCGCAAACA
TCCAACACTCCCCTACTCCGCACATCCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGCAAAATCATCAAC
AGCTCATCGTGGTTACGGAGTCCAGAAGACGGTTGGAGGACTGAATATCTATTGGCTGGATTAGAACCTCAAACC
AATTATACCGCTTTTGTCATTCAAGATGATTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCA
TTTCATTGTACACTCGTGCATTCTCTACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGC
ACCTCCATCGGCCAATTTCCAATATACGATACCACGTCGTTACCTCGACAACTACAAGACACCTTTATACGCACT
TTACAAAATTTTACGGTGGCTCTTTTGACATTTGCGTGTGGAAGAGATTTTTATTCTCCCGTTGTGGGATGTGAA
GAATGTCAAAAGGAATATCGGAAATGGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAAT
CCTGATTTTGTGGTTTGGGATTCGAGTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTA
TCTGCTTTGTTACCTATGCCTTCCTCATCTTCCTCATCAACGAAGCAAACACCGTTTATGAATCAAGCATATATG
AAATTGTTACCCTGTATAGAAACATGTACGTCTGTCGATCGAGCATGTCCACCTTTTCTTCAATTTAGATGTCCG
AATTCGATGTTTAATGGGGCGGCGAGTTATGGGTTTGGGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGAGG
GGGGGGGTTGTGGATAGTGCGCAGGATGGGTGGGGGAATGTGTGGTGTAATGAGGGGTAG
Gene >AgabiH97|026650
ATGCTCCTGCTCTGTCTGCTCTCTCTCCTCCTCGCCACGCACGCACAGCAGCTGCGACTCTCCCTCAACACCGTC
ACTCGCTTCGACTCTTCCTCCTCCTCCTTCACTGTCCCTCCCCAAGACCAGCTCTCCATCTCTATCGCTCTCTGC
TCACCCTCCACCCCTCCCCGCGTCATTATCTCGACTGATGATCTAGACGTGCACGAGGTCATTCTAAAAGACGGA
TTCGGTCTCTTTACCGGATCATTTGAGAAGGGCGGGACCATCACACTCGATGGCCTATCCCCAGGGGCTTCTTTC
GAACTTGGCCTCTCCACCAACGGTGCGTTACCAACACTTCCCATTATACCTCTGCTCATCTCTCTCTATCAGGCC
CCCTGCACGAGATAGTATCCCGCGATCCCCTCTTTGGCGACTCTACGAATAACCAAGCCATCCTCTTTTCCCACC
CCTTCGCCTTTCCTCCTCCCACTCCCCCTCCTCAATTCCCCAATTACACTTTACCAGCAGCAAATGCTACACTAC
CAGACCCTCCTTCTTCACTCCCAAACCTCACTCTCATCGTTTCGCAAACATCCAACACTCCCCTACTCCGCACAT
CCTGTTTTCTAAACTCTTCGGCCGTCAAAGCCGAGGGCAAAATCATCAACAGCTCATCGTGGTTACGGAGTCCAG
AAGACGGTTGGAGGACTGAATATCTATTGGCTGGATTAGAACCTCAAACCAATTATACCGCTTTTGTCATTCAAG
ATGATTATAAAGTGTCTGGTCCAATTTACTTTTTCACCAAATCGACTTCATTTCATTGTACACTCGTGCATTCTC
TACCTTATTGCCCAGCAACATCGTATTCCATTCCCCTCTCCCCTCCCAGCACCTCCATCGGCCAATTTCCAATAT
ACGATACCACGTCGTTACCTCGACAACTACAAGACACCTTTATACGCACTTTACAAAATTTTACGGTGGCTCTTT
TGACATTTGCGTGTGGAAGAGATTTTTATTCTCCCGTTGTGGGATGTGAAGAATGTCAAAAGGAATATCGGAAAT
GGCTTTGTACGGTTGTGTTTCCTAGGTGTACGGAACCTAGTCCTGGGAATCCTGATTTTGTGGTTTGGGATTCGA
GTTTGAATGGGGTTGTGAATGCTCAACTTCCTGGATCTCAAACTGTCGTATCTGCTTTGTTACCTATGCCTTCCT
CATCTTCCTCATCAACGAAGCAAACACCGTTTATGAATCAAGCATATATGAAATTGTTACCCTGTATAGAAACAT
GTACGTCTGTCGATCGAGCATGTCCACCTTTTCTTCAATTTAGATGTCCGAATTCGATGTTTAATGGGGCGGCGA
GTTATGGGTTTGGGTATATGGATGGTGGGGGGTTGGATGGGAGGTGGAGGGGGGGGGTTGTGGATAGTGCGCAGG
ATGGGTGGGGGAATGTGTGGTGTAATGAGGGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail