Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|026240
Gene name
Locationscaffold_11:1194042..1196092
Strand-
Gene length (bp)2050
Transcript length (bp)1668
Coding sequence length (bp)1668
Protein length (aa) 556

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09335 SNARE_assoc SNARE associated Golgi protein 3.7E-14 167 281

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B2AMJ3|TVP38_PODAN Golgi apparatus membrane protein TVP38 OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=TVP38 PE=3 SV=1 75 337 2.0E-56
sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TVP38 PE=3 SV=1 104 352 1.0E-20
sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TVP38 PE=3 SV=1 102 323 4.0E-20
sp|Q9P781|TVP38_SCHPO Golgi apparatus membrane protein tvp38 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tvp38 PE=3 SV=2 115 372 2.0E-19
sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1 41 342 1.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|B2AMJ3|TVP38_PODAN Golgi apparatus membrane protein TVP38 OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=TVP38 PE=3 SV=1 75 337 2.0E-56
sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TVP38 PE=3 SV=1 104 352 1.0E-20
sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TVP38 PE=3 SV=1 102 323 4.0E-20
sp|Q9P781|TVP38_SCHPO Golgi apparatus membrane protein tvp38 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tvp38 PE=3 SV=2 115 372 2.0E-19
sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1 41 342 1.0E-18
sp|A7A047|TVP38_YEAS7 Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain YJM789) GN=TVP38 PE=3 SV=1 41 342 1.0E-18
sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1 116 318 5.0E-18
sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1 76 304 1.0E-17
sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana (strain B05.10) GN=tvp38 PE=3 SV=1 113 307 2.0E-16
sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2 85 368 1.0E-15
sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TVP38 PE=3 SV=1 123 352 1.0E-15
sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=tvp38 PE=3 SV=1 72 318 6.0E-14
sp|Q6CXJ8|TVP38_KLULA Golgi apparatus membrane protein TVP38 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TVP38 PE=3 SV=1 113 328 2.0E-13
sp|A8NX72|TVP38_COPC7 Golgi apparatus membrane protein TVP38 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=TVP38 PE=3 SV=1 105 323 4.0E-13
sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3 SV=1 126 319 2.0E-11
sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tvp38 PE=3 SV=1 126 319 2.0E-11
sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tvp38 PE=3 SV=1 126 319 3.0E-11
sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2 126 371 4.0E-11
sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2 104 384 5.0E-11
sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tvp38 PE=3 SV=1 77 319 1.0E-10
sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1 104 318 2.0E-09
sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=2 SV=2 98 319 3.0E-09
sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1 98 319 2.0E-08
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 107 126 19
2 146 165 19
3 172 194 22
4 248 270 22
5 297 319 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|026240
MYNPYDPPRQGFTSLQQDEAYKPSSHQPAATAYQDPLVYPPGPPNGQLSTHSFPSSLAYKPSQDVEDGVVLRGGT
PSPTPSEEKEMKTGAIDWKSVTNWRFWIRKEWIWYYVALVVILVIVALMTIYHKQIVHWLTPVTRWLHDLSFGWI
VPIAVLFVISFPPLFGHEIVAVLCGLVWGLWIGFGIVAAGTFLGEVGNFYAFKYCCRSRGEKLERTSIFYACLSK
VVRDGGFKIALIARLSAIPGHFTTAIFSTCGMGIIVFSIAAILSLPKQFITVYLGVLLEQSADGTETSTSRVISG
VVLGITTLITFVAMWYIYHLMNKVKPEVIYLRRKTRQIKLERRRSPPNSSENGHLPDPSYTTTIENTSESELPLT
SQNIPMGYAAAFADPAHFQQEEPTEHYDTYLHAPKPQRPGRQIKPEEGLRSTPNLDSNYPQTSLSPTANTYDPFA
DSNSPVPSPLIRSSPPKSYPPTQTFSTFVGSREPASEFSPVPQYNPSDRGSPRVTAPTFNNHPVSSPNSGQQGPY
STGYLNSPEPMTESDDGHSIPPRQRPGVPR*
Coding >AgabiH97|026240
ATGTACAACCCATATGATCCTCCCCGGCAGGGCTTCACAAGCTTGCAGCAGGACGAGGCGTACAAGCCTTCTTCA
CATCAGCCGGCAGCTACAGCATACCAGGACCCCCTCGTATATCCCCCAGGACCACCAAATGGACAACTCTCGACC
CATTCTTTTCCATCATCTTTGGCTTATAAGCCATCGCAGGATGTGGAAGACGGCGTAGTTCTCCGAGGAGGAACC
CCAAGCCCGACACCAAGCGAGGAAAAGGAGATGAAAACAGGCGCTATCGACTGGAAGTCTGTGACGAATTGGCGA
TTTTGGATCAGAAAGGAGTGGATATGGTATTATGTCGCGCTTGTAGTAATCCTTGTCATCGTGGCTCTTATGACG
ATATATCATAAGCAAATAGTCCATTGGCTCACGCCAGTGACAAGGTGGCTACACGATCTCTCTTTTGGATGGATT
GTCCCAATCGCAGTCTTGTTTGTCATCTCCTTTCCTCCGCTTTTTGGACATGAAATTGTCGCTGTGTTATGTGGT
CTTGTGTGGGGTTTGTGGATTGGGTTTGGGATTGTCGCTGCAGGTACATTTTTGGGTGAAGTGGGCAACTTCTAC
GCTTTCAAGTATTGTTGCCGGTCAAGGGGTGAAAAGCTCGAGCGGACTAGCATATTTTATGCCTGCTTGTCCAAA
GTCGTTCGGGACGGTGGATTCAAGATTGCATTAATCGCACGACTGAGCGCTATACCGGGACATTTCACCACGGCG
ATATTTTCGACGTGCGGAATGGGAATTATCGTGTTCTCTATCGCTGCTATTCTTTCCTTGCCCAAACAATTCATC
ACCGTATACCTTGGAGTTCTTCTTGAGCAAAGCGCTGATGGAACTGAGACTTCGACCAGTCGCGTTATCAGCGGA
GTTGTGCTGGGAATAACGACTCTCATCACTTTTGTAGCTATGTGGTATATCTATCATTTGATGAACAAAGTGAAA
CCGGAGGTCATATACTTGAGGCGCAAGACCAGGCAAATTAAACTCGAGAGACGAAGGAGCCCCCCGAATTCAAGT
GAAAATGGACATTTACCGGACCCGTCGTACACCACAACCATTGAAAACACCTCAGAATCTGAACTACCTCTTACA
TCACAAAACATACCCATGGGATATGCTGCTGCATTCGCTGACCCGGCACATTTCCAACAGGAAGAGCCTACAGAA
CACTACGATACATACCTTCATGCACCTAAACCACAGAGACCCGGACGCCAAATAAAGCCTGAGGAGGGATTGCGC
AGCACACCAAATCTCGACTCAAACTACCCTCAAACGAGTCTATCTCCGACAGCAAATACCTATGATCCTTTTGCG
GATTCAAACAGTCCTGTACCTTCACCGCTTATACGGTCGTCTCCGCCAAAAAGTTATCCCCCGACTCAAACTTTC
TCCACATTTGTTGGATCGCGAGAACCCGCTTCTGAGTTCTCTCCAGTACCACAATACAATCCCTCTGACCGTGGA
TCTCCGAGAGTTACTGCCCCCACATTCAACAATCATCCTGTATCGTCCCCTAACTCTGGTCAACAGGGGCCCTAT
AGCACAGGATACCTGAATTCTCCCGAACCTATGACCGAAAGTGATGATGGACATTCAATTCCTCCCCGTCAGCGA
CCAGGGGTGCCTCGTTGA
Transcript >AgabiH97|026240
ATGTACAACCCATATGATCCTCCCCGGCAGGGCTTCACAAGCTTGCAGCAGGACGAGGCGTACAAGCCTTCTTCA
CATCAGCCGGCAGCTACAGCATACCAGGACCCCCTCGTATATCCCCCAGGACCACCAAATGGACAACTCTCGACC
CATTCTTTTCCATCATCTTTGGCTTATAAGCCATCGCAGGATGTGGAAGACGGCGTAGTTCTCCGAGGAGGAACC
CCAAGCCCGACACCAAGCGAGGAAAAGGAGATGAAAACAGGCGCTATCGACTGGAAGTCTGTGACGAATTGGCGA
TTTTGGATCAGAAAGGAGTGGATATGGTATTATGTCGCGCTTGTAGTAATCCTTGTCATCGTGGCTCTTATGACG
ATATATCATAAGCAAATAGTCCATTGGCTCACGCCAGTGACAAGGTGGCTACACGATCTCTCTTTTGGATGGATT
GTCCCAATCGCAGTCTTGTTTGTCATCTCCTTTCCTCCGCTTTTTGGACATGAAATTGTCGCTGTGTTATGTGGT
CTTGTGTGGGGTTTGTGGATTGGGTTTGGGATTGTCGCTGCAGGTACATTTTTGGGTGAAGTGGGCAACTTCTAC
GCTTTCAAGTATTGTTGCCGGTCAAGGGGTGAAAAGCTCGAGCGGACTAGCATATTTTATGCCTGCTTGTCCAAA
GTCGTTCGGGACGGTGGATTCAAGATTGCATTAATCGCACGACTGAGCGCTATACCGGGACATTTCACCACGGCG
ATATTTTCGACGTGCGGAATGGGAATTATCGTGTTCTCTATCGCTGCTATTCTTTCCTTGCCCAAACAATTCATC
ACCGTATACCTTGGAGTTCTTCTTGAGCAAAGCGCTGATGGAACTGAGACTTCGACCAGTCGCGTTATCAGCGGA
GTTGTGCTGGGAATAACGACTCTCATCACTTTTGTAGCTATGTGGTATATCTATCATTTGATGAACAAAGTGAAA
CCGGAGGTCATATACTTGAGGCGCAAGACCAGGCAAATTAAACTCGAGAGACGAAGGAGCCCCCCGAATTCAAGT
GAAAATGGACATTTACCGGACCCGTCGTACACCACAACCATTGAAAACACCTCAGAATCTGAACTACCTCTTACA
TCACAAAACATACCCATGGGATATGCTGCTGCATTCGCTGACCCGGCACATTTCCAACAGGAAGAGCCTACAGAA
CACTACGATACATACCTTCATGCACCTAAACCACAGAGACCCGGACGCCAAATAAAGCCTGAGGAGGGATTGCGC
AGCACACCAAATCTCGACTCAAACTACCCTCAAACGAGTCTATCTCCGACAGCAAATACCTATGATCCTTTTGCG
GATTCAAACAGTCCTGTACCTTCACCGCTTATACGGTCGTCTCCGCCAAAAAGTTATCCCCCGACTCAAACTTTC
TCCACATTTGTTGGATCGCGAGAACCCGCTTCTGAGTTCTCTCCAGTACCACAATACAATCCCTCTGACCGTGGA
TCTCCGAGAGTTACTGCCCCCACATTCAACAATCATCCTGTATCGTCCCCTAACTCTGGTCAACAGGGGCCCTAT
AGCACAGGATACCTGAATTCTCCCGAACCTATGACCGAAAGTGATGATGGACATTCAATTCCTCCCCGTCAGCGA
CCAGGGGTGCCTCGTTGA
Gene >AgabiH97|026240
ATGTACAACCCATATGATCCTCCCCGGCAGGGCTTCACAAGCTTGCAGCAGGACGAGGCGTACAAGCCTTCTTCA
CATCAGCCGGCAGCTACAGCATACCAGGACCCCCTCGTATATCCCCCAGGACCACCAAATGGACAACTCTCGACC
CATTCTTTTCCATCATCTTTGGCTTATAAGCCATCGCAGGATGTGGAAGACGGCGTAGTTCTCCGAGGAGGAACC
CCAAGCCCGACACCAAGCGAGGAAAAGGAGATGAAAACAGGCGCTATCGACTGGAAGTCTGTGACGAATTGGCGA
TTTTGGATCAGAAAGGAGTGGATATGTATGTTGGGCTCGGAAAATCGGCGGAATATCCTATTAACGATGGCCTTC
TGCTTGGATTGTTCAGGGTATTATGTCGCGCTTGTAGTAATCCTTGTCATCGTGGCTCTTATGACGATATATCAT
AAGCAAATAGTCCATTGGCTCACGCCAGTGACAAGGTGGCTACACGAGTGAGTGTGAATGTTTCGTAATGTCATG
GAGATATTGATAATCAACCATTCACCTAGTCTCTCTTTTGGATGGATTGTCCCAATCGCAGTCTTGTTTGTCATC
TCCTTTCCTCCGGTACGCCTCCTGTTGGTCGCGTAATTGAGCCTGACTGACACGAGGAAGCTTTTTGGACATGAA
ATTGTCGCTGTGTTATGTGGTCTTGTGTGGGGTTTGTGGATTGGGTTTGGGATTGTCGCTGCAGGTACATTTTTG
GGTGAAGTGGGCAACTTCTAGTGCGTATTCCTTGAACACCGAAGCTACACCAAGAATAACGCTCTCGGTGATAGC
GCTTTCAAGTATTGTTGCCGGTCAAGGGGTGAAAAGCTCGAGCGGACTAGCATATTTTATGCCTGCTTGTCCAAA
GTCGTTCGGGACGGTGGATTCAAGATTGCATTAATCGCACGACTGAGCGCTATACCGGGACATTGTGCGTCTTTG
TTGTCTTCGAGAGTGCGTATCGCTCACTGACCCGTCACAAGTCACCACGGCGATATTTTCGACGTGCGGAATGGG
AATTATCGTGTTCTCTATCGCTGCTATTCTTTCCTTGCCCAAACAATTCATCACCGTATACCTTGGAGTTCTTCT
TGAGCAAAGCGCTGATGGTTAGCAGTGTTTTCAACCTTCCGTTGGATAAAGCTAACATATTCCGTCAGGAACTGA
GACTTCGACCAGTCGCGTTATCAGCGGAGTTGTGCTGGGAATAACGACTCTCATCACTTTTGTAGCTATGTGGTA
TATCTATCATTTGATGAACAAAGTGAAACCGGAGGTCATATACTTGAGGCGCAAGACCAGGTACGTTTTACCCCA
TTCTTGTGTTTATGTATGTATAACTCATGTGGAGGGCAGGCAAATTAAACTCGAGAGACGAAGGAGCCCCCCGAA
TTCAAGTGAAAATGGACATTTACCGGACCCGTCGTACACCACAACCATTGAAAACACCTCAGAATCTGAACTACC
TCTTACATCACAAAACATACCCATGGGATATGCTGCTGCATTCGCTGACCCGGCACATTTCCAACAGGAAGAGCC
TACAGAACACTACGATACATACCTTCATGCACCTAAACCACAGAGACCCGGACGCCAAATAAAGCCTGAGGAGGG
ATTGCGCAGCACACCAAATCTCGACTCAAACTACCCTCAAACGAGTCTATCTCCGACAGCAAATACCTATGATCC
TTTTGCGGATTCAAACAGTCCTGTACCTTCACCGCTTATACGGTCGTCTCCGCCAAAAAGTTATCCCCCGACTCA
AACTTTCTCCACATTTGTTGGATCGCGAGAACCCGCTTCTGAGTTCTCTCCAGTACCACAATACAATCCCTCTGA
CCGTGGATCTCCGAGAGTTACTGCCCCCACATTCAACAATCATCCTGTATCGTCCCCTAACTCTGGTCAACAGGG
GCCCTATAGCACAGGATACCTGAATTCTCCCGAACCTATGACCGAAAGTGATGATGGACATTCAATTCCTCCCCG
TCAGCGACCAGGGGTGCCTCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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