Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|025890
Gene name
Location	scaffold_11:1112963..1114181
Strand	-
Gene length (bp)	1218
Transcript length (bp)	936
Coding sequence length (bp)	936
Protein length (aa)	312

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10455	BAR_2	Bin/amphiphysin/Rvs domain for vesicular trafficking	3.8E-48	32	290
PF03114	BAR	BAR domain	6.5E-14	24	294

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P40531\|GVP36_YEAST	Protein GVP36 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GVP36 PE=1 SV=1	35	284	7.0E-34
sp\|Q10253\|MUG64_SCHPO	Meiotically up-regulated gene 64 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug64 PE=1 SV=3	49	290	1.0E-17
sp\|Q9U8G7\|P29_ECHGR	Hydatid disease diagnostic antigen P-29 OS=Echinococcus granulosus PE=1 SV=1	76	293	1.0E-06

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005737	cytoplasm	Yes
GO:0005575	cellular_component	No
GO:0003674	molecular_function	No
GO:0005488	binding	No
GO:0110165	cellular anatomical entity	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|025890 MDGWKALQSSIGSINFAQAGSKLSKGFNHSVQATRERLGQVAPEDITELPQEYKDLEARVDALRSAHLAVLKITR VYDNETYDYPNQIQESISELSTSIGYNITSFAAQNLKGTNLPTPAAPAAPENQHKTLPHALTRASATAHATIANT VGGEQDKLGKALGLYAQGLDKVASARVEQDITIQDGFLHPWQTTLNTSINVAMKARQAVKLSRLELDAAKQSLKN ANPAKQEQARLEVENAEDDLVQKTEVAITLMKTVLENPEPLKNLNELAKAQLIYFSSAAEALSAVQGEIEELSVA AEGEYRKSRDH*
Coding	>AgabiH97\|025890 ATGGACGGCTGGAAAGCACTACAATCAAGTATCGGCTCTATCAACTTTGCCCAGGCTGGCTCAAAGCTCTCCAAG GGCTTTAATCACAGCGTACAAGCCACCAGGGAGCGTCTCGGCCAGGTGGCCCCAGAAGACATCACAGAGCTGCCC CAAGAATACAAGGACCTGGAGGCCCGTGTCGACGCACTTCGCTCTGCCCATCTTGCTGTACTCAAGATAACGCGC GTCTACGACAATGAAACATACGATTATCCCAATCAAATTCAAGAATCGATCTCTGAGCTTTCGACTTCCATTGGT TACAATATCACCTCTTTCGCGGCACAGAACTTGAAGGGCACGAATCTTCCTACTCCTGCTGCACCTGCTGCACCG GAAAATCAGCACAAGACCTTGCCGCATGCTCTCACCCGAGCTTCAGCCACTGCCCATGCCACTATCGCGAACACT GTTGGTGGTGAACAAGATAAGCTCGGCAAAGCGCTAGGATTGTATGCTCAGGGTTTGGATAAGGTAGCGAGTGCA AGGGTGGAGCAGGATATTACCATTCAAGACGGGTTCTTGCACCCATGGCAAACTACGCTGAATACAAGTATTAAT GTAGCGATGAAGGCGAGGCAAGCTGTCAAGCTCAGTAGATTGGAATTGGATGCTGCTAAACAATCGTTGAAGAAT GCAAACCCCGCCAAACAGGAGCAGGCTCGTCTTGAAGTCGAGAATGCTGAGGATGACTTGGTCCAGAAAACTGAG GTTGCTATCACTCTGATGAAGACCGTTCTCGAGAATCCGGAACCTCTCAAGAACCTCAACGAACTTGCAAAGGCC CAACTTATCTACTTCTCATCTGCCGCCGAGGCTCTGTCTGCCGTTCAAGGTGAGATCGAAGAGCTCAGCGTGGCT GCGGAGGGCGAATACAGAAAGTCCAGGGATCACTGA
Transcript	>AgabiH97\|025890 ATGGACGGCTGGAAAGCACTACAATCAAGTATCGGCTCTATCAACTTTGCCCAGGCTGGCTCAAAGCTCTCCAAG GGCTTTAATCACAGCGTACAAGCCACCAGGGAGCGTCTCGGCCAGGTGGCCCCAGAAGACATCACAGAGCTGCCC CAAGAATACAAGGACCTGGAGGCCCGTGTCGACGCACTTCGCTCTGCCCATCTTGCTGTACTCAAGATAACGCGC GTCTACGACAATGAAACATACGATTATCCCAATCAAATTCAAGAATCGATCTCTGAGCTTTCGACTTCCATTGGT TACAATATCACCTCTTTCGCGGCACAGAACTTGAAGGGCACGAATCTTCCTACTCCTGCTGCACCTGCTGCACCG GAAAATCAGCACAAGACCTTGCCGCATGCTCTCACCCGAGCTTCAGCCACTGCCCATGCCACTATCGCGAACACT GTTGGTGGTGAACAAGATAAGCTCGGCAAAGCGCTAGGATTGTATGCTCAGGGTTTGGATAAGGTAGCGAGTGCA AGGGTGGAGCAGGATATTACCATTCAAGACGGGTTCTTGCACCCATGGCAAACTACGCTGAATACAAGTATTAAT GTAGCGATGAAGGCGAGGCAAGCTGTCAAGCTCAGTAGATTGGAATTGGATGCTGCTAAACAATCGTTGAAGAAT GCAAACCCCGCCAAACAGGAGCAGGCTCGTCTTGAAGTCGAGAATGCTGAGGATGACTTGGTCCAGAAAACTGAG GTTGCTATCACTCTGATGAAGACCGTTCTCGAGAATCCGGAACCTCTCAAGAACCTCAACGAACTTGCAAAGGCC CAACTTATCTACTTCTCATCTGCCGCCGAGGCTCTGTCTGCCGTTCAAGGTGAGATCGAAGAGCTCAGCGTGGCT GCGGAGGGCGAATACAGAAAGTCCAGGGATCACTGA
Gene	>AgabiH97\|025890 ATGGACGGCTGGAAAGCACTACAATCAAGTATCGGCTCTATCAACTTTGCCCAGGCTGGCTCAAAGCTCTCCAAG GGCTTTAATCACAGCGTACAAGCCACCAGGGAGCGTCTCGGCCAGGTGGCCCCAGAAGACATCACAGAGCTGCCC CAAGGTACGCATGGATCGTCCGAACATCCAGTCTACCCTCGAACAATACTTTTTCAGAATACAAGGACCTGGAGG CCCGTGTCGACGCACTTCGCTCTGCCCATCTTGCTGTACTCAAGTGCGTATCTTGTTTTTCTCGCCTTGTGCGCA GAAAGTTGAATTGCTGTGGCTAGGATAACGCGCGTCTACGACAATGAAACATACGATTATCCCAATCAAATTCAA GAATCGATCTCTGAGCTTTCGACTTCCATTGGTTACAATATCACCTCTTTCGCGGCACAGAACTTGAAGGGCACG AATCTTCCTACTCCTGCTGCACCTGCTGCACCGGAAAATCAGCACAAGACCTTGCCGCATGCTCTCACCCGAGCT TCAGCCACTGCCCATGCCACTATCGCGAACACTGTTGGTGGTGAACAAGATAAGCTCGGCAAAGCGCTAGGATTG TATGCTCAGGGTTTGGATAAGGTAGCGAGTGCAAGGGTGGAGCAGGATATTACCATTCAAGACGGGTTCTTGCAC CCATGGCAAACTACGCTGAATACAAGTATTAATGTAGCGATGAAGGCGAGGCAAGCTGTCAAGCTCAGTAGATTG GAATTGGATGCTGCTAAACAATCGTGAGTGGCTTCCTCTCTTGCCACTGCTGTTGGAGCCTTACGGTTTTGAGTG CACAGGTTGAAGAATGCAAACCCCGCCAAACAGGAGCAGGCTCGTCTTGAAGTCGAGAATGCTGAGGATGACTTG GTCCAGAAAACTGAGGTTGCTATCACTCTGATGAAGACCGTTCTCGAGAATGTGCGGCACTTTTCCTCTGTTATA TGGTGTTGATTCTGATCCCCCCTGTTTTTATAGCCGGAACCTCTCAAGAACCTCAACGAACTTGCAAAGGCCCAA CTTATCTACTTCTCATCTGCCGCCGAGGCTCTGTCTGCCGTTCAAGGTGAGATCGAAGAGCTCAGCGTGGCTGCG GAGGGCGAATACAGGCAAGCAGAATCGATTCACTGAGAGTACCGACATATTGTCCTGATTTTGCTTTCGCGTAGA AAGTCCAGGGATCACTGA

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