© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|024790 |
| Gene name | |
| Location | scaffold_11:820991..822611 |
| Strand | + |
| Gene length (bp) | 1620 |
| Transcript length (bp) | 1389 |
| Coding sequence length (bp) | 1389 |
| Protein length (aa) | 463 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16491 | Peptidase_M48_N | CAAX prenyl protease N-terminal, five membrane helices | 1.7E-62 | 47 | 230 |
| PF01435 | Peptidase_M48 | Peptidase family M48 | 6.8E-40 | 233 | 452 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8RX88|FACE1_ARATH | CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 | 38 | 458 | 3.0E-101 |
| sp|P47154|STE24_YEAST | CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 | 23 | 459 | 4.0E-97 |
| sp|Q80W54|FACE1_MOUSE | CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 | 29 | 456 | 1.0E-89 |
| sp|Q6EPN8|FACE1_ORYSJ | CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 | 29 | 460 | 2.0E-89 |
| sp|O75844|FACE1_HUMAN | CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 | 29 | 451 | 1.0E-88 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8RX88|FACE1_ARATH | CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 | 38 | 458 | 3.0E-101 |
| sp|P47154|STE24_YEAST | CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 | 23 | 459 | 4.0E-97 |
| sp|Q80W54|FACE1_MOUSE | CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 | 29 | 456 | 1.0E-89 |
| sp|Q6EPN8|FACE1_ORYSJ | CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 | 29 | 460 | 2.0E-89 |
| sp|O75844|FACE1_HUMAN | CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 | 29 | 451 | 1.0E-88 |
| sp|Q10071|STE24_SCHPO | Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 | 25 | 451 | 4.0E-85 |
| sp|Q54FH7|FACE1_DICDI | CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 | 42 | 451 | 3.0E-70 |
| sp|Q9XVE5|FACE1_CAEEL | CAAX prenyl protease 1 homolog OS=Caenorhabditis elegans GN=fce-1 PE=1 SV=1 | 34 | 458 | 6.0E-60 |
| sp|P40769|YHFN_BACSU | Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 | 124 | 451 | 3.0E-25 |
| sp|Q3J0F7|HTPX_RHOS4 | Protease HtpX homolog OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=htpX PE=3 SV=1 | 230 | 455 | 2.0E-07 |
| sp|A3PLU3|HTPX_RHOS1 | Protease HtpX homolog OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=htpX PE=3 SV=1 | 230 | 455 | 2.0E-07 |
| sp|A4WRW9|HTPX_RHOS5 | Protease HtpX homolog OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=htpX PE=3 SV=1 | 230 | 396 | 3.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006508 | proteolysis | Yes |
| GO:0004222 | metalloendopeptidase activity | Yes |
| GO:0008237 | metallopeptidase activity | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0003824 | catalytic activity | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0019538 | protein metabolic process | No |
| GO:0008233 | peptidase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0008152 | metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 130 | 152 | 22 |
| 2 | 172 | 194 | 22 |
| 3 | 201 | 223 | 22 |
| 4 | 322 | 344 | 22 |
| 5 | 349 | 368 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|024790 MDILHNQLQAVQRSLSFVSTDPIDWKFYVQVFAWSVTLFESYLITRQYPLYSKTEPPKALQGHFEKGEFEKSQAY GKDKARFAFVSGLYKQTLDSLMLQFGFYAWSWQAAGSLLAKFGYGTEHQIIQSIGFVFILFFVSSLPTLPLQVYG TFVLEEKHGFNKTTPTLFVTDLLKGWAIAFVLGAPFLAVFLYIFEWAGDRFVPWLMAFMITFQLSMVILYPTVIQ PLFNKLSPLSEGDLRNRIEALAVKLKFPLKHLYEIDGSKRSSHSNAYFFGLPWSKHIVIFDTLIQQSKPEEVEAV LAHELGHWYYLHPTKLMAVSQLHIFTILALFPAFLHAPPLLSAFDFSKGVAAAPPTIVAFLLFQMILTPLEAVIS IGMNAVSRQFEWEADKFAVELEEKLNEKDMGDMGDRLGKALITLHVKNLSTVWVDWLYSAYHHSHPTLTERLRAL EGFAEEKRKKTT* |
| Coding | >AgabiH97|024790 ATGGACATCCTCCACAACCAACTTCAAGCCGTTCAACGCAGCCTCTCGTTTGTTTCTACCGACCCCATAGATTGG AAATTCTATGTTCAAGTTTTTGCCTGGTCTGTAACGCTTTTTGAGTCATACTTGATAACGAGGCAATATCCACTA TATTCTAAAACCGAGCCACCGAAAGCTCTACAAGGCCATTTTGAAAAGGGAGAATTTGAAAAATCCCAAGCGTAT GGAAAAGATAAGGCTAGGTTTGCCTTTGTGTCTGGGTTGTATAAACAGACGCTGGATTCTCTCATGCTACAATTT GGATTCTACGCGTGGTCGTGGCAGGCTGCTGGGAGCTTATTGGCTAAGTTTGGATATGGTACTGAACACCAGATA ATACAGTCGATTGGGTTTGTATTTATCTTGTTCTTTGTATCCTCCCTTCCGACGCTACCATTGCAAGTCTATGGA ACGTTTGTTTTGGAAGAAAAACACGGTTTCAACAAGACGACGCCTACATTATTTGTTACGGATTTATTGAAAGGC TGGGCCATTGCTTTCGTTCTTGGTGCACCCTTCTTGGCGGTCTTCTTATACATCTTTGAGTGGGCTGGAGACAGA TTCGTACCTTGGCTAATGGCTTTCATGATTACGTTCCAGTTGTCGATGGTCATACTCTATCCGACGGTTATCCAA CCGTTGTTTAACAAATTGTCGCCTCTCTCAGAAGGTGACCTGAGGAACAGGATTGAAGCTCTAGCTGTCAAACTG AAGTTCCCGTTGAAGCATTTGTATGAGATTGATGGAAGCAAGAGGAGTTCACATTCGAATGCATACTTCTTTGGT TTGCCCTGGAGCAAGCACATTGTGATTTTCGATACTCTTATCCAGCAATCCAAGCCTGAGGAGGTGGAAGCTGTG CTTGCACATGAGCTCGGACACTGGTATTACCTCCACCCTACCAAGCTTATGGCCGTCTCCCAGCTACACATTTTC ACTATCCTCGCGCTTTTCCCTGCTTTCTTGCATGCGCCTCCCTTGCTGAGTGCTTTTGACTTTTCCAAAGGAGTT GCGGCGGCACCGCCAACGATTGTGGCATTCCTTCTTTTCCAAATGATTCTTACGCCTCTAGAGGCCGTTATTAGT ATTGGCATGAATGCGGTCAGTCGCCAGTTTGAGTGGGAGGCGGACAAATTTGCGGTGGAATTGGAGGAAAAGCTG AATGAGAAGGATATGGGGGATATGGGAGACCGATTGGGAAAAGCGTTGATTACGCTGCACGTGAAAAACCTGTCG ACGGTGTGGGTTGACTGGCTGTACTCTGCGTACCACCACTCGCACCCCACGTTGACGGAGAGACTGAGGGCGCTG GAAGGATTTGCAGAGGAGAAGAGAAAAAAGACTACTTAG |
| Transcript | >AgabiH97|024790 ATGGACATCCTCCACAACCAACTTCAAGCCGTTCAACGCAGCCTCTCGTTTGTTTCTACCGACCCCATAGATTGG AAATTCTATGTTCAAGTTTTTGCCTGGTCTGTAACGCTTTTTGAGTCATACTTGATAACGAGGCAATATCCACTA TATTCTAAAACCGAGCCACCGAAAGCTCTACAAGGCCATTTTGAAAAGGGAGAATTTGAAAAATCCCAAGCGTAT GGAAAAGATAAGGCTAGGTTTGCCTTTGTGTCTGGGTTGTATAAACAGACGCTGGATTCTCTCATGCTACAATTT GGATTCTACGCGTGGTCGTGGCAGGCTGCTGGGAGCTTATTGGCTAAGTTTGGATATGGTACTGAACACCAGATA ATACAGTCGATTGGGTTTGTATTTATCTTGTTCTTTGTATCCTCCCTTCCGACGCTACCATTGCAAGTCTATGGA ACGTTTGTTTTGGAAGAAAAACACGGTTTCAACAAGACGACGCCTACATTATTTGTTACGGATTTATTGAAAGGC TGGGCCATTGCTTTCGTTCTTGGTGCACCCTTCTTGGCGGTCTTCTTATACATCTTTGAGTGGGCTGGAGACAGA TTCGTACCTTGGCTAATGGCTTTCATGATTACGTTCCAGTTGTCGATGGTCATACTCTATCCGACGGTTATCCAA CCGTTGTTTAACAAATTGTCGCCTCTCTCAGAAGGTGACCTGAGGAACAGGATTGAAGCTCTAGCTGTCAAACTG AAGTTCCCGTTGAAGCATTTGTATGAGATTGATGGAAGCAAGAGGAGTTCACATTCGAATGCATACTTCTTTGGT TTGCCCTGGAGCAAGCACATTGTGATTTTCGATACTCTTATCCAGCAATCCAAGCCTGAGGAGGTGGAAGCTGTG CTTGCACATGAGCTCGGACACTGGTATTACCTCCACCCTACCAAGCTTATGGCCGTCTCCCAGCTACACATTTTC ACTATCCTCGCGCTTTTCCCTGCTTTCTTGCATGCGCCTCCCTTGCTGAGTGCTTTTGACTTTTCCAAAGGAGTT GCGGCGGCACCGCCAACGATTGTGGCATTCCTTCTTTTCCAAATGATTCTTACGCCTCTAGAGGCCGTTATTAGT ATTGGCATGAATGCGGTCAGTCGCCAGTTTGAGTGGGAGGCGGACAAATTTGCGGTGGAATTGGAGGAAAAGCTG AATGAGAAGGATATGGGGGATATGGGAGACCGATTGGGAAAAGCGTTGATTACGCTGCACGTGAAAAACCTGTCG ACGGTGTGGGTTGACTGGCTGTACTCTGCGTACCACCACTCGCACCCCACGTTGACGGAGAGACTGAGGGCGCTG GAAGGATTTGCAGAGGAGAAGAGAAAAAAGACTACTTAG |
| Gene | >AgabiH97|024790 ATGGACATCCTCCACAACCAACTTCAAGCCGTTCAACGCAGCCTCTCGTTTGTTTCTACCGACCCCATAGATTGG AAATTCTATGTTCAAGTTTTTGCCTGGTCTGTAACGCTTTTTGAGTCATACTTGATGTGCGTTGTATTTTTCCTT TTTCGTGTTTTCCACCCCTTCATAATTTTCCTCATAGAACGAGGCAATATCCACTATATTCTAAAACCGAGCCAC CGAAAGCTCTACAAGGCCATTTTGAAAAGGGAGAATTTGAAAAATCCCAAGCGTATGGAAAAGATAAGGCTAGGT TTGCCTTTGTGTCTGGGTTGTATAAACAGACGCTGGATTCTCTCATGCTACAATTTGGATTCTACGCGTGGTCGT GGCAGGCTGCTGGGAGCTTATTGGCTAAGTTTGGATATGGTACTGAACACCAGGTACTTTCATTTTTTCCTTCTC TTTCTACACCGTCCCCTTAAACTGACTGGTTTTGGTCGCATAGATAATACAGTCGATTGGGTTTGTATTTATCTT GTTCTTTGTATCCTCCCTTCCGACGCTACCATTGCAAGTCTATGGAACGTTTGTTTTGGAAGAAAAACACGGTTT CAACAAGACGACGCCTACATTATTTGTTACGGATTTATTGAAAGGCTGGGCCATTGCTTTCGTTCTTGGTGCACC CTTCTTGGCGGTCTTCTTATACATCTTTGAGTGGGCTGGAGACAGATTCGTACCTTGGCTAATGGCTTTCATGTG AGTTCGAAATTCTATTGTTCGTTGATCGTTGAATGATAATAATATGCATCCATAAAGGATTACGTTCCAGTTGTC GATGGTCATACTCTATCCGACGGTTATCCAACCGTTGTTTAACAAATTGTCGCCTCTCTCAGAAGGTGACCTGAG GAACAGGATTGAAGCTCTAGCTGTCAAACTGAAGTTCCCGTTGAAGCATTTGTATGAGATTGATGGAAGCAAGAG GAGTTCACATTCGAATGCATACTTCTTTGGTTTGCCCTGGGTAAGTTTTATGACATTTCATTGATATTAAATTCT GACGGTGCTTGTTAGAGCAAGCACATTGTGATTTTCGATACTCTTATCCAGCAATCCAAGCCTGAGGAGGTGGAA GCTGTGCTTGCACATGAGCTCGGACACTGGTATTACCTCCACCCTACCAAGCTTATGGCCGTCTCCCAGCTACAC ATTTTCACTATCCTCGCGCTTTTCCCTGCTTTCTTGCATGCGCCTCCCTTGCTGAGTGCTTTTGACTTTTCCAAA GGAGTTGCGGCGGCACCGCCAACGATTGTGGCATTCCTTCTTTTCCAAATGATTCTTACGCCTCTAGAGGCCGTT ATTAGTATTGGCATGAATGCGGTCAGTCGCCAGTTTGAGTGGGAGGCGGACAAATTTGCGGTGGAATTGGAGGAA AAGCTGAATGAGAAGGATATGGGGGATATGGGAGACCGATTGGGAAAAGCGTTGATTACGCTGCACGTGAAAAAC CTGTCGACGGTGTGGGTTGACTGGCTGTACTCTGCGTACCACCACTCGCACCCCACGTTGACGGAGAGACTGAGG GCGCTGGAAGGATTTGCAGAGGAGAAGAGAAAAAAGACTACTTAG |