Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|024730
Gene name
Locationscaffold_11:804725..805312
Strand+
Gene length (bp)587
Transcript length (bp)375
Coding sequence length (bp)375
Protein length (aa) 125

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01185 Hydrophobin Fungal hydrophobin 1.4E-23 43 120

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 9 124 1.0E-21
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 43 122 1.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 40 124 2.0E-17
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 43 120 4.0E-14
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 33 120 5.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|O13300|HYP3_AGABI Hydrophobin-3 OS=Agaricus bisporus GN=abh3 PE=3 SV=1 9 124 1.0E-21
sp|P16933|SC3_SCHCO Fruiting body protein SC3 OS=Schizophyllum commune GN=SC3 PE=1 SV=2 43 122 1.0E-21
sp|P04158|SC1_SCHCO Fruiting body protein SC1 OS=Schizophyllum commune GN=SC1 PE=2 SV=2 40 124 2.0E-17
sp|O43122|HYP4_AGABI Hydrophobin-B OS=Agaricus bisporus GN=hypB PE=3 SV=1 43 120 4.0E-14
sp|P52748|HYP1_PISTI Hydrophobin-1 OS=Pisolithus tinctorius GN=HYD-1 PE=2 SV=1 33 120 5.0E-12
sp|P52749|HYP2_PISTI Hydrophobin-2 (Fragment) OS=Pisolithus tinctorius GN=HYD-2 PE=2 SV=1 29 123 2.0E-11
sp|O74300|SC6_SCHCO Hydrophobin-6 OS=Schizophyllum commune GN=SC6 PE=3 SV=1 33 117 2.0E-11
sp|P49072|HYP1_AGABI Hydrophobin-1 OS=Agaricus bisporus GN=hypA PE=2 SV=1 9 124 2.0E-10
sp|P49073|HYP2_AGABI Hydrophobin-2 OS=Agaricus bisporus GN=hypC PE=3 SV=2 43 124 3.0E-10
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GO

GO Term Description Terminal node
GO:0005199 structural constituent of cell wall Yes
GO:0009277 fungal-type cell wall Yes
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0005618 cell wall No
GO:0030312 external encapsulating structure No
GO:0005198 structural molecule activity No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|024730
MLVSIPRAIFNLVLLLTFAVCASAITTVPVNARRSDPLPADLCPAGNLQCCNALERADDSVVGVLLGLLGIVLQG
VEALVGITCSPIDILGIGQNECHTQAVCCENNDFHGIVAIGCVPIIISL*
Coding >AgabiH97|024730
ATGTTGGTCTCTATTCCTCGCGCAATTTTCAATCTCGTCCTTCTCCTCACGTTTGCCGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTTAACGCCCGACGTTCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGT
TGCAACGCCCTTGAGAGGGCAGACGACAGTGTTGTGGGAGTGCTCCTGGGTCTTCTTGGCATAGTGCTCCAGGGC
GTAGAAGCTCTCGTAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTGCCACACCCAA
GCGGTATGCTGCGAAAACAATGACTTCCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA
Transcript >AgabiH97|024730
ATGTTGGTCTCTATTCCTCGCGCAATTTTCAATCTCGTCCTTCTCCTCACGTTTGCCGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTTAACGCCCGACGTTCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGT
TGCAACGCCCTTGAGAGGGCAGACGACAGTGTTGTGGGAGTGCTCCTGGGTCTTCTTGGCATAGTGCTCCAGGGC
GTAGAAGCTCTCGTAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTGCCACACCCAA
GCGGTATGCTGCGAAAACAATGACTTCCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA
Gene >AgabiH97|024730
ATGTTGGTCTCTATTCCTCGCGCAATTTTCAATCTCGTCCTTCTCCTCACGTTTGCCGTGTGTGCATCCGCGATT
ACAACCGTCCCAGTTAACGCCCGAGTATGTAACGATTCACATCCATTTGCGCAACTAATGAATTTCGATAAGCGT
TCGGATCCTCTTCCGGCGGACCTGTGCCCAGCAGGTAACCTTCAATGTTGCAACGCCCTTGAGAGGGTATGTAAT
CGATTCATCTGTTGTCGTGAGCGTAGACTCATGTGAGATGTGTTCAGGCAGACGACAGTGTTGTGGGAGTGCTCC
TGGGTCTTCTTGGCATAGTGCTCCAGGGCGTAGAAGCTCTCGTGTAAGGCCAATGCAATTCCTGGGGCTGCCGAT
GAGCTAAAAAAAATTCACCATCAGAGGCATAACTTGCTCGCCAATCGATATCTTAGGGATCGGTCAAAATGAGTG
CCACACCCAAGCGGTATGCTGCGAAAACAATGACTTCGTGAGTGAGCAAGGTCAGGTTCGGTCTAGCTATATTGA
CTTGCTTTTTGCAGCATGGCATCGTTGCAATCGGTTGCGTTCCGATCATTATCAGCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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