© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|024700 |
| Gene name | |
| Location | scaffold_11:798775..799866 |
| Strand | - |
| Gene length (bp) | 1091 |
| Transcript length (bp) | 882 |
| Coding sequence length (bp) | 882 |
| Protein length (aa) | 294 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05721 | PhyH | Phytanoyl-CoA dioxygenase (PhyH) | 2.6E-11 | 11 | 223 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Peroxisomal targeting signal | 0.7185 | 0.4823 | 0.0421 | 0.0363 | 0.2213 | 0.2437 | 0.0752 | 0.0635 | 0.0283 | 0.1462 |
| Orthofinder run ID | 1 |
| Orthogroup | 5616 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|024700 |
| Agaricus bisporus var bisporus H97 | AgabiH97|024700 (this protein) |
| Rhodonia placenta FPRL280 | RhoplFPRL280|259_8 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|024700 MAIDKSIKQTYDELGYVVVPGLIPQEHWNDLDAACERVVQKTRTGTWSHRRTVGKQFPPFDNDNPDSWGVQHVMH PQLNEPAFGKWYTSEGLLDIVKELLGCSDEQLQLELFNMLINPLSHDFALRWHRDDVNEKASEEEERNALNTWHY GVQWNAALRPDSCLYVVPRSHSQVRTPEQRKLSETSDAPENPLDMPGAIRVTLQPGETIFYNSNILHCATYSSTS PRVTLHGCIGDIRGGSTRARNVLQHGLEWMKGDEFRASLPQGLRARKMLDNLLDMQKNSGPVGYSLQN* |
| Coding | >AgabiH97|024700 ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG GGCTGCAGTGATGAGCAACTGCAGTTAGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTC CGCTGGCATCGCGACGATGTTAATGAGAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTAT GGAGTGCAGTGGAATGCCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAAGTGAGG ACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCTATCCGA GTCACTTTACAACCCGGTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCT CCTCGAGTCACATTACACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCAC GGACTGGAGTGGATGAAGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGAT AACCTTTTGGACATGCAGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA |
| Transcript | >AgabiH97|024700 ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG GGCTGCAGTGATGAGCAACTGCAGTTAGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTC CGCTGGCATCGCGACGATGTTAATGAGAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTAT GGAGTGCAGTGGAATGCCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAAGTGAGG ACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCTATCCGA GTCACTTTACAACCCGGTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCT CCTCGAGTCACATTACACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCAC GGACTGGAGTGGATGAAGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGAT AACCTTTTGGACATGCAGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA |
| Gene | >AgabiH97|024700 ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG GGCTGCAGTGATGAGCAACTGCAGTTAGGTTTGTCCGTTGATTGCATGGGATACCAGTGGCTAACGTATCAGAAA AGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTCCGCTGGCATCGCGACGATGTTAATGA GAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTATGGAGTATGTTTAACTGCATGCTAGCG ATCTTCGGGTACTCACGACAGTCAACTCTAGGTGCAGTGGAATGCGTATGGTCAGATCTATTACTATACACTTCT TCGCCATTGAAGTAACCTTCTAGCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAA GTGAGGACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCT ATCCGAGTCACTTTACAACGTGAGCAGAATCATCATTATTTCCCATCTGACGCCGCCTGACCACACTGTTAGCCG GTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCTCCTCGAGTCACATTAC ACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCACGGACTGGAGTGGATGA AGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGATAACCTTTTGGACATGC AGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA |