Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|024700
Gene name
Locationscaffold_11:798775..799866
Strand-
Gene length (bp)1091
Transcript length (bp)882
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05721 PhyH Phytanoyl-CoA dioxygenase (PhyH) 2.6E-11 11 223

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|024700
MAIDKSIKQTYDELGYVVVPGLIPQEHWNDLDAACERVVQKTRTGTWSHRRTVGKQFPPFDNDNPDSWGVQHVMH
PQLNEPAFGKWYTSEGLLDIVKELLGCSDEQLQLELFNMLINPLSHDFALRWHRDDVNEKASEEEERNALNTWHY
GVQWNAALRPDSCLYVVPRSHSQVRTPEQRKLSETSDAPENPLDMPGAIRVTLQPGETIFYNSNILHCATYSSTS
PRVTLHGCIGDIRGGSTRARNVLQHGLEWMKGDEFRASLPQGLRARKMLDNLLDMQKNSGPVGYSLQN*
Coding >AgabiH97|024700
ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG
GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC
AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC
CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG
GGCTGCAGTGATGAGCAACTGCAGTTAGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTC
CGCTGGCATCGCGACGATGTTAATGAGAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTAT
GGAGTGCAGTGGAATGCCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAAGTGAGG
ACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCTATCCGA
GTCACTTTACAACCCGGTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCT
CCTCGAGTCACATTACACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCAC
GGACTGGAGTGGATGAAGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGAT
AACCTTTTGGACATGCAGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA
Transcript >AgabiH97|024700
ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG
GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC
AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC
CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG
GGCTGCAGTGATGAGCAACTGCAGTTAGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTC
CGCTGGCATCGCGACGATGTTAATGAGAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTAT
GGAGTGCAGTGGAATGCCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAAGTGAGG
ACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCTATCCGA
GTCACTTTACAACCCGGTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCT
CCTCGAGTCACATTACACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCAC
GGACTGGAGTGGATGAAGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGAT
AACCTTTTGGACATGCAGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA
Gene >AgabiH97|024700
ATGGCCATCGACAAGTCTATCAAACAAACGTACGACGAGCTGGGCTATGTCGTTGTCCCAGGACTCATTCCCCAG
GAACACTGGAATGATCTAGATGCTGCTTGCGAGAGGGTCGTTCAGAAGACCCGTACGGGCACCTGGTCCCATCGC
AGAACCGTTGGAAAGCAATTCCCGCCATTCGATAATGACAACCCTGATTCCTGGGGTGTGCAGCATGTCATGCAC
CCGCAACTAAATGAACCCGCTTTTGGCAAATGGTACACTTCGGAGGGTTTGCTTGACATCGTCAAAGAACTATTG
GGCTGCAGTGATGAGCAACTGCAGTTAGGTTTGTCCGTTGATTGCATGGGATACCAGTGGCTAACGTATCAGAAA
AGAACTCTTCAATATGCTCATCAATCCCTTAAGCCACGATTTTGCTCTCCGCTGGCATCGCGACGATGTTAATGA
GAAGGCGTCCGAGGAAGAGGAGCGCAATGCTCTGAACACTTGGCATTATGGAGTATGTTTAACTGCATGCTAGCG
ATCTTCGGGTACTCACGACAGTCAACTCTAGGTGCAGTGGAATGCGTATGGTCAGATCTATTACTATACACTTCT
TCGCCATTGAAGTAACCTTCTAGCGCTCTTCGTCCTGATAGCTGCTTATACGTTGTTCCGCGCTCGCACAGCCAA
GTGAGGACACCGGAACAACGTAAGCTTTCGGAAACTTCAGACGCTCCAGAGAATCCTCTGGACATGCCGGGAGCT
ATCCGAGTCACTTTACAACGTGAGCAGAATCATCATTATTTCCCATCTGACGCCGCCTGACCACACTGTTAGCCG
GTGAAACCATATTCTACAATTCAAACATCCTGCACTGCGCCACATACAGTTCTACTTCTCCTCGAGTCACATTAC
ACGGCTGTATCGGTGACATTAGGGGTGGATCTACAAGGGCGCGTAATGTACTTCAGCACGGACTGGAGTGGATGA
AGGGCGACGAGTTTAGGGCATCGCTTCCACAAGGTCTGAGAGCCAGAAAAATGCTTGATAACCTTTTGGACATGC
AGAAGAACAGCGGCCCAGTCGGGTACTCTCTTCAAAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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