© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|024470 |
| Gene name | |
| Location | scaffold_11:751858..753698 |
| Strand | + |
| Gene length (bp) | 1840 |
| Transcript length (bp) | 978 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02182 | SAD_SRA | SAD/SRA domain | 3.0E-46 | 49 | 198 |
| PF11976 | Rad60-SLD | Ubiquitin-2 like Rad60 SUMO-like | 3.2E-11 | 247 | 307 |
| PF00240 | ubiquitin | Ubiquitin family | 6.3E-07 | 246 | 309 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q96T88|UHRF1_HUMAN | E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 | 47 | 194 | 3.0E-21 |
| sp|Q7TPK1|UHRF1_RAT | E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 | 47 | 194 | 1.0E-20 |
| sp|A7E320|UHRF1_BOVIN | E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1 | 47 | 194 | 1.0E-20 |
| sp|Q8VDF2|UHRF1_MOUSE | E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2 | 47 | 194 | 2.0E-20 |
| sp|E7EZF3|UHRF1_DANRE | E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1 | 47 | 194 | 2.0E-20 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q96T88|UHRF1_HUMAN | E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1 | 47 | 194 | 3.0E-21 |
| sp|Q7TPK1|UHRF1_RAT | E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=1 SV=2 | 47 | 194 | 1.0E-20 |
| sp|A7E320|UHRF1_BOVIN | E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1 | 47 | 194 | 1.0E-20 |
| sp|Q8VDF2|UHRF1_MOUSE | E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2 | 47 | 194 | 2.0E-20 |
| sp|E7EZF3|UHRF1_DANRE | E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1 | 47 | 194 | 2.0E-20 |
| sp|B6CHA3|UHRF1_XENLA | E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2 SV=1 | 47 | 194 | 2.0E-20 |
| sp|F6UA42|UHRF1_XENTR | E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3 SV=2 | 47 | 194 | 7.0E-20 |
| sp|Q7TMI3|UHRF2_MOUSE | E3 ubiquitin-protein ligase UHRF2 OS=Mus musculus GN=Uhrf2 PE=1 SV=1 | 47 | 194 | 2.0E-17 |
| sp|Q96PU4|UHRF2_HUMAN | E3 ubiquitin-protein ligase UHRF2 OS=Homo sapiens GN=UHRF2 PE=1 SV=1 | 47 | 194 | 1.0E-16 |
| sp|Q9C8E1|ORTH4_ARATH | Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana GN=ORTH4 PE=3 SV=1 | 58 | 194 | 3.0E-16 |
| sp|Q680I0|ORTH5_ARATH | E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana GN=ORTH5 PE=2 SV=1 | 58 | 194 | 3.0E-16 |
| sp|Q8VYZ0|ORTH2_ARATH | E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana GN=ORTH2 PE=1 SV=1 | 58 | 194 | 7.0E-16 |
| sp|Q9FKA7|ORTH1_ARATH | E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana GN=ORTH1 PE=1 SV=1 | 58 | 194 | 2.0E-15 |
| sp|Q9T0G7|SUVH9_ARATH | Histone-lysine N-methyltransferase family member SUVH9 OS=Arabidopsis thaliana GN=SUVH9 PE=1 SV=1 | 58 | 239 | 5.0E-15 |
| sp|Q8GZB6|SUVH4_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2 | 89 | 201 | 2.0E-13 |
| sp|Q9FVS2|ORTH3_ARATH | E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana GN=ORTH3 PE=3 SV=2 | 58 | 194 | 3.0E-13 |
| sp|Q5QD03|SUVH3_CHLRE | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii GN=SUVH3 PE=2 SV=1 | 50 | 197 | 5.0E-13 |
| sp|O82175|SUVH5_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 OS=Arabidopsis thaliana GN=SUVH5 PE=1 SV=1 | 58 | 204 | 5.0E-13 |
| sp|O13351|PMT3_SCHPO | Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmt3 PE=1 SV=2 | 215 | 315 | 7.0E-13 |
| sp|O22781|SUVH2_ARATH | Histone-lysine N-methyltransferase family member SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1 | 58 | 198 | 3.0E-12 |
| sp|Q681I0|ORTHL_ARATH | E3 ubiquitin-protein ligase ORTHRUS-LIKE 1 OS=Arabidopsis thaliana GN=ORTHL PE=2 SV=1 | 58 | 194 | 3.0E-12 |
| sp|Q9C5P4|SUVH3_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Arabidopsis thaliana GN=SUVH3 PE=2 SV=2 | 58 | 213 | 1.0E-11 |
| sp|Q9FF80|SUVH1_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Arabidopsis thaliana GN=SUVH1 PE=2 SV=1 | 58 | 211 | 1.0E-11 |
| sp|Q12306|SMT3_YEAST | Ubiquitin-like protein SMT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMT3 PE=1 SV=1 | 235 | 315 | 2.0E-11 |
| sp|Q8VZ17|SUVH6_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6 OS=Arabidopsis thaliana GN=SUVH6 PE=2 SV=2 | 89 | 293 | 7.0E-10 |
| sp|Q93YF5|SUVH1_TOBAC | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 OS=Nicotiana tabacum GN=SUVH1 PE=1 SV=1 | 1 | 211 | 3.0E-08 |
| sp|Q9FLP6|SUMO2_ARATH | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana GN=SUMO2 PE=1 SV=1 | 229 | 314 | 4.0E-08 |
| sp|P55857|SUMO1_ORYSJ | Small ubiquitin-related modifier 1 OS=Oryza sativa subsp. japonica GN=SUMO1 PE=1 SV=1 | 234 | 316 | 5.0E-08 |
| sp|Q9C5P0|SUVH8_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 OS=Arabidopsis thaliana GN=SUVH8 PE=3 SV=1 | 83 | 200 | 5.0E-08 |
| sp|Q9FHI0|YDG1_ARATH | YDG domain-containing protein At5g47150 OS=Arabidopsis thaliana GN=At5g47150 PE=2 SV=1 | 58 | 201 | 1.0E-07 |
| sp|Q3E8A8|SUMO7_ARATH | Putative small ubiquitin-related modifier 7 OS=Arabidopsis thaliana GN=SUMO7 PE=1 SV=2 | 238 | 318 | 8.0E-07 |
| sp|P55852|SUMO1_ARATH | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana GN=SUMO1 PE=1 SV=2 | 230 | 312 | 9.0E-07 |
| sp|P55854|SUMO3_HUMAN | Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2 | 240 | 322 | 1.0E-06 |
| sp|Q9C5P1|SUVH7_ARATH | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1 | 88 | 200 | 1.0E-06 |
| sp|Q7ZTK7|SMO2A_XENLA | Small ubiquitin-related modifier 2-A OS=Xenopus laevis GN=sumo2-a PE=3 SV=1 | 240 | 316 | 5.0E-06 |
| sp|Q3EC60|SUVHA_ARATH | Putative inactive histone-lysine N-methyltransferase family member SUVH10 OS=Arabidopsis thaliana GN=SUVH10 PE=3 SV=1 | 89 | 219 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.5316 | 0.7164 | 0.0682 | 0.1066 | 0.2079 | 0.0085 | 0.0734 | 0.2066 | 0.1255 | 0.0089 |
| Orthofinder run ID | 1 |
| Orthogroup | 3455 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Agaricus bisporus var bisporus H39 | AgabiH39|024470 |
| Agaricus bisporus var bisporus H97 | AgabiH97|024470 (this protein) |
| Rhodonia placenta FPRL280 | RhoplFPRL280|36_47 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|024470 MAMERLRRQIMQNDQSGTYRFNDDTGGATQIASPKGGDFLSSEASAADHYGHPDKCPVGRIFESRKACYDAKVHR APMKGILGTVSEGAYSIVMNDGYEDDVDEGDVVYYTGAGGQENFGSSVQIKDQSFDHLDNRTLQRNIVTKHPVRV IRGSKNSKYGLFRGYRYDGLYDVVHADYAKGKRGYQICRFKLQRRPGQLPLKDLPHAVITWNKRNVHSINWALHF PLTMSQEPEDVKPKLNLTVLYEGESITVKVRPTMQFSKIFQAAEKRFQKEPGTFRFTYDGQRVNANDTPGDLNME EGDQIDAHLGQVGGCFEHSFSGLAV* |
| Coding | >AgabiH97|024470 ATGGCCATGGAAAGACTCCGCCGGCAAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACC GGCGGCGCTACCCAAATCGCGTCCCCGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTAT GGGCATCCGGATAAATGTCCTGTCGGTCGCATCTTTGAAAGTCGGAAGGCTTGTTATGATGCGAAAGTTCATCGA GCGCCCATGAAAGGTATTCTCGGCACTGTCAGTGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGAT GATGTTGACGAGGGCGACGTGGTCTATTACACTGGAGCCGGAGGGCAGGAGAACTTTGGCAGTTCGGTACAAATC AAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTC ATCCGTGGAAGCAAGAATTCTAAATATGGGCTTTTCAGAGGATACCGTTATGATGGTTTATATGATGTAGTCCAC GCAGACTATGCTAAGGGAAAACGCGGTTATCAAATTTGTAGATTCAAGCTGCAAAGACGTCCTGGACAACTGCCT TTGAAAGATTTGCCGCACGCGGTTATCACGTGGAATAAGCGTAACGTTCACAGCATAAACTGGGCATTACACTTT CCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAATTTGACTGTCCTTTACGAGGGAGAATCG ATCACCGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGAAACGGTTTCAAAAGGAA CCCGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCAAATGATACACCAGGAGACTTAAACATGGAA GAGGGTGATCAGATTGATGCTCATTTGGGGCAGGTGGGCGGTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTT TGA |
| Transcript | >AgabiH97|024470 ATGGCCATGGAAAGACTCCGCCGGCAAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACC GGCGGCGCTACCCAAATCGCGTCCCCGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTAT GGGCATCCGGATAAATGTCCTGTCGGTCGCATCTTTGAAAGTCGGAAGGCTTGTTATGATGCGAAAGTTCATCGA GCGCCCATGAAAGGTATTCTCGGCACTGTCAGTGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGAT GATGTTGACGAGGGCGACGTGGTCTATTACACTGGAGCCGGAGGGCAGGAGAACTTTGGCAGTTCGGTACAAATC AAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTC ATCCGTGGAAGCAAGAATTCTAAATATGGGCTTTTCAGAGGATACCGTTATGATGGTTTATATGATGTAGTCCAC GCAGACTATGCTAAGGGAAAACGCGGTTATCAAATTTGTAGATTCAAGCTGCAAAGACGTCCTGGACAACTGCCT TTGAAAGATTTGCCGCACGCGGTTATCACGTGGAATAAGCGTAACGTTCACAGCATAAACTGGGCATTACACTTT CCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAATTTGACTGTCCTTTACGAGGGAGAATCG ATCACCGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGAAACGGTTTCAAAAGGAA CCCGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCAAATGATACACCAGGAGACTTAAACATGGAA GAGGGTGATCAGATTGATGCTCATTTGGGGCAGGTGGGCGGTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTT TGA |
| Gene | >AgabiH97|024470 ATGGCCATGGAAAGACTGTTAGTCCCCGTCCTCTCAATTTTAAGCCGCATTGACAATTTCTTTGCAGCCGCCGGC AAATTATGCAGAATGACCAAAGCGGTACTTATCGCTTCAACGATGATACCGGCGGCGCTACCCAAATCGCGTCCC CGAAGGGTGGGGACTTCCTCTCGAGTGAGGCATCAGCAGCGGATCATTATGGGCATCCGGATAAATGTCCTGTCG GTCGCATCTTTGAAAGTCGGTGCGTTGACTCGCCTCAACCAGACTGTGGGCATCATCATCTTATGAGGCCTTTTG TTGCTCTTTCATGTAGGAAGGCTTGTTATGATGCGAAAGTTCATCGAGCGCCCATGAAAGGTATTCTCGGCACTG TCAGTGAGGGTGCTTATTCGATAGTGATGAATGATGGGTATGAGGATGATGTTGACGAGGGCGACGTGGTGTGGG TCGTACGCTCTTCAATCTCAGTAGATCTGTGTCTCACCCTACAAAAACAGCTATTACACTGGAGCCGGAGGGCAG GAGAACTTTGGCAGTGTACGTCCTTAGCACTATCCTTCTTGGCCTTAAAAGTATCACTGACTCCATCATTTTTTA CAGTCGGTACAAATCAAGGATCAAAGCTTTGATCACCTTGATAATCGCACTCTTCAGGTAGGTGGTTTCCGTGGA GCACAAGTTCACCCTAACTTTTGAGCGTAAAGAGGAATATCGTTACGAAGCATCCTGTGAGAGTCATCCGTGGAA GCAAGAATTCTAAATATGGGCTTTTCAGAGGGTGAGCTTCGTCGACGTTTATGATACCTCTCTCTGACTGTGACG CATTGCTTCGTTAGATACCGTTATGATGGTTTATATGATGTAGTCCACGTAAGTGCTTTGTCTATTGAAATATGT CACCCAGCTGATTCGTATATGCACAGGCAGACTATGCTAAGGGAAAACGCGGTTATCAAATTTGTAGATTCAAGC TGCAAGTGAGATCCCATCCTTTTCTTTTCAATCGAAGAAGGTATTAACTATTAATGCAGAGACGTCCTGGACAAC TGCCTTTGAAAGATTTGCCGCGTATGTAACACTCTGCTTGATACCATAATGCTTCAGCTTTGTATTTTTATAAAC CATATTGGGCTATGTTATTGCTTTTTGTCGCGGTGTGACTGAAGACGCGGTTATCACGTGGAATAAGCGTAACGT TCACAGCATAAACTGGGCATTACACTTTCCTTTGACCATGTCACAAGAGCCCGAGGACGTGAAGCCAAAGCTTAA TTTGACTGTCCTTTACGAGGGAGAATGTGCGTTATCTGTCGTGCCGGAATCGATGCTCCATCGTGATTTTCTTTC GCAGCGATCACCGTCAAAGTGAGACCTACAATGCAATTTTCCAAGATTTTTCAAGCGGCAGAGGTGTGTGCGCTT AACCTCCAACTGCCTTGGAAGCTATTTTGACTTTGTATATAGAAACGGTTTCAAAAGGAACCCGGTGCGTCCTCA CTTCCACAAAGTTGGATCCATCGACCTAATCAATCATGTCCAATACCTCGTCTTGTGAACGGGCATTACGCTGCA AATAGGCACCTTCCGATTCACATACGATGGGCAACGAGTAAATGCAAATGATACACCAGGAGACGTTAGTTCCTC TTTTCTTCGCGCATCAATTTATTTTAAATGCGGTTTATTTCAGTTAAACATGGAAGAGGGTGATCAGATTGATGC TCATTTGGGGCAGGTACGCCTCTTTCTTGTTTCCCCCTCTCTCACATGTACTCATGCACTCTCATGTTAGGTGGG CGGTTGTTTTGAACATTCCTTTTCGGGTCTTGCTGTTTGA |