© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|024140 |
| Gene name | |
| Location | scaffold_11:678733..679126 |
| Strand | + |
| Gene length (bp) | 393 |
| Transcript length (bp) | 339 |
| Coding sequence length (bp) | 339 |
| Protein length (aa) | 113 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01328 | Peroxidase_2 | Peroxidase, family 2 | 6.1E-17 | 67 | 111 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B9W4V6|APO1_AGRAE | Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 | 7 | 112 | 3.0E-33 |
| sp|B9W4V8|APO1_COPRA | Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 | 49 | 111 | 2.0E-19 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004601 | peroxidase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016209 | antioxidant activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1054 | 0.0378 | 0.9513 | 0.0634 | 0.0488 | 0.0206 | 0.2918 | 0.1847 | 0.1856 | 0.0011 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999728 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Orthofinder run ID | 1 |
| Orthogroup | 173 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|024140 MFSLVYFTTLVLGFAAPAIAFPAHGSLAGLSREEMDKALATLKFTPPPPPPGPLDFSGTKLVNDAKHPFMDARPG DIRGPCPGLNTLASHGYISRTGITSCSEIITAVMEGV* |
| Coding | >AgabiH97|024140 ATGTTCAGTCTTGTATACTTCACCACTCTTGTCCTGGGTTTTGCTGCTCCCGCTATCGCCTTTCCGGCACATGGA TCTTTGGCTGGATTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTTACCCCTCCGCCACCTCCT CCCGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAGGC GACATTCGTGGACCATGCCCAGGCTTGAATACACTCGCTTCCCATGGGTATATAAGTCGCACTGGAATTACCAGC TGTTCAGAGATCATCACTGCAGTGATGGAAGGTGTGTAA |
| Transcript | >AgabiH97|024140 ATGTTCAGTCTTGTATACTTCACCACTCTTGTCCTGGGTTTTGCTGCTCCCGCTATCGCCTTTCCGGCACATGGA TCTTTGGCTGGATTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTTACCCCTCCGCCACCTCCT CCCGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAGGC GACATTCGTGGACCATGCCCAGGCTTGAATACACTCGCTTCCCATGGGTATATAAGTCGCACTGGAATTACCAGC TGTTCAGAGATCATCACTGCAGTGATGGAAGGTGTGTAA |
| Gene | >AgabiH97|024140 ATGTTCAGTCTTGTATACTTCACCACTCTTGTCCTGGGTTTTGCTGCTCCCGCTATCGCCTTTCCGGCACATGGA TCTTTGGCTGGATTGTCAAGAGAAGAGATGGACAAAGCATTGGCCACGCTCAAATTTACCCCTCCGCCACCTCCT CCCGGTCCGCTGGATTTCAGTGGCACCAAGCTTGTCAATGACGCCAAACATCCTTTCATGGATGCGAGACCAGGC GACATTCGTGGACCATGCCCAGGCTTGAATACACTCGCTTCCCATGGGGTTCGTATTGTTTTTCAAGTTTGCTTC GGGCTGCAATCTGACCGCTTTCTATAGTATATAAGTCGCACTGGAATTACCAGCTGTTCAGAGATCATCACTGCA GTGATGGAAGGTGTGTAA |