Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|024100
Gene name
Location	scaffold_11:665122..666404
Strand	+
Gene length (bp)	1282
Transcript length (bp)	1074
Coding sequence length (bp)	1074
Protein length (aa)	358

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12146	Hydrolase_4	Serine aminopeptidase, S33	1.8E-15	94	327
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	9.0E-11	97	199
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	3.0E-10	98	339

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P9WGS3\|EPHD_MYCTU	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ephD PE=1 SV=1	74	159	7.0E-09
sp\|P9WGS2\|EPHD_MYCTO	Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ephD PE=3 SV=1	74	159	7.0E-09
sp\|P66778\|EPHD_MYCBO	Probable oxidoreductase EphD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ephD PE=3 SV=1	74	159	7.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|024100 MNTASSSRVLDDDVEKLTKVKGISSYSKPSVDCILNVNSSGDRKSLTLDNAARSSTVANLDDYDCCYGNGSTESR MLVSADGTEIYANAVGDPLKQAIVFIHGFVWSFMAFDDIFEDVEWMSRFYLVRYDVRGHGRSGKPEGDEAWEWKR FAEDFDAVVEAYGLHKPFVAGWSLGGCHLLDILTLHPVDYVAGIINIAGATYLDDTQLEKLATPEGRDYIHRMSV LPSVEDFQSGAKDFVDACCRTLPYEVRERCLGNIMIQPRSTMVHSLTRKQRVETFEMVGKTMLPCLLIFGDEDEL IMIDELERQYREVWRNLTVEVVKGGCHVPWTKTQRDVAAVFSKKTLAWIDCVMQSQN*
Coding	>AgabiH97\|024100 ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT CTTGTTCGGTATGATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGG TTTGCGGAAGATTTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGAGTTTAGGA GGTTGTCATTTGTTGGATATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCG ACGTATTTGGATGATACGCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTT TTACCGAGTGTTGAGGATTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAA GTGCGAGAACGGTGTCTAGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAG AGGGTGGAGACGTTTGAGATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTG ATTATGATTGATGAGTTGGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGT TGCCATGTTCCGTGGACGAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGAT TGCGTTATGCAGTCTCAGAATTAG
Transcript	>AgabiH97\|024100 ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT CTTGTTCGGTATGATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGG TTTGCGGAAGATTTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGAGTTTAGGA GGTTGTCATTTGTTGGATATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCG ACGTATTTGGATGATACGCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTT TTACCGAGTGTTGAGGATTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAA GTGCGAGAACGGTGTCTAGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAG AGGGTGGAGACGTTTGAGATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTG ATTATGATTGATGAGTTGGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGT TGCCATGTTCCGTGGACGAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGAT TGCGTTATGCAGTCTCAGAATTAG
Gene	>AgabiH97\|024100 ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT CTTGTGAGTTTTTCATAATCCTCTCTTTAGGTAAAGTTGAGTTTTTGACGTTTGGATAAAATGAAGGTTCGGTAT GATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGGTTTGCGGAAGAT TTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGTACGTCGTTTTTTTGTTTATG ATTTCTTCTCGTGGGTGAATTATTTCTCATCATTTTGGATATTCATAGGAGTTTAGGAGGTGAGTCTATCACAAA GTTTAAAATTAAATTTAGCCGGAGTACATATAATTAACATTGCGATTTTTTTAATGTAGGTTGTCATTTGTTGGA TATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCGACGTATTTGGATGATAC GCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTTTTACCGAGTGTTGAGGA TTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAAGTGCGAGAACGGTGTCT AGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAGAGGGTGGAGACGTTTGA GATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTGATTATGATTGATGAGTT GGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGTTGCCATGTTCCGTGGAC GAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGATTGCGTTATGCAGTCTCA GAATTAG

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