Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|024100
Gene name
Locationscaffold_11:665122..666404
Strand+
Gene length (bp)1282
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12146 Hydrolase_4 Serine aminopeptidase, S33 1.8E-15 94 327
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 9.0E-11 97 199
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 3.0E-10 98 339

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P9WGS3|EPHD_MYCTU Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ephD PE=1 SV=1 74 159 7.0E-09
sp|P9WGS2|EPHD_MYCTO Probable oxidoreductase EphD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ephD PE=3 SV=1 74 159 7.0E-09
sp|P66778|EPHD_MYCBO Probable oxidoreductase EphD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ephD PE=3 SV=1 74 159 7.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|024100
MNTASSSRVLDDDVEKLTKVKGISSYSKPSVDCILNVNSSGDRKSLTLDNAARSSTVANLDDYDCCYGNGSTESR
MLVSADGTEIYANAVGDPLKQAIVFIHGFVWSFMAFDDIFEDVEWMSRFYLVRYDVRGHGRSGKPEGDEAWEWKR
FAEDFDAVVEAYGLHKPFVAGWSLGGCHLLDILTLHPVDYVAGIINIAGATYLDDTQLEKLATPEGRDYIHRMSV
LPSVEDFQSGAKDFVDACCRTLPYEVRERCLGNIMIQPRSTMVHSLTRKQRVETFEMVGKTMLPCLLIFGDEDEL
IMIDELERQYREVWRNLTVEVVKGGCHVPWTKTQRDVAAVFSKKTLAWIDCVMQSQN*
Coding >AgabiH97|024100
ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC
TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT
GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG
ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT
ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT
CTTGTTCGGTATGATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGG
TTTGCGGAAGATTTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGAGTTTAGGA
GGTTGTCATTTGTTGGATATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCG
ACGTATTTGGATGATACGCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTT
TTACCGAGTGTTGAGGATTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAA
GTGCGAGAACGGTGTCTAGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAG
AGGGTGGAGACGTTTGAGATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTG
ATTATGATTGATGAGTTGGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGT
TGCCATGTTCCGTGGACGAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGAT
TGCGTTATGCAGTCTCAGAATTAG
Transcript >AgabiH97|024100
ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC
TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT
GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG
ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT
ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT
CTTGTTCGGTATGATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGG
TTTGCGGAAGATTTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGAGTTTAGGA
GGTTGTCATTTGTTGGATATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCG
ACGTATTTGGATGATACGCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTT
TTACCGAGTGTTGAGGATTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAA
GTGCGAGAACGGTGTCTAGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAG
AGGGTGGAGACGTTTGAGATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTG
ATTATGATTGATGAGTTGGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGT
TGCCATGTTCCGTGGACGAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGAT
TGCGTTATGCAGTCTCAGAATTAG
Gene >AgabiH97|024100
ATGAACACCGCCTCTTCATCCAGAGTCCTAGACGACGACGTCGAGAAGTTAACGAAAGTCAAAGGAATTAGTAGC
TATAGTAAACCCTCTGTCGATTGTATCTTGAACGTTAACTCCTCGGGCGACCGGAAAAGTTTGACATTGGATAAT
GCTGCTCGTAGCAGTACTGTTGCCAATTTGGATGATTACGATTGCTGTTATGGGAATGGGAGCACGGAGTCGAGG
ATGCTGGTTTCTGCGGATGGAACGGAGATTTATGCGAATGCGGTTGGTGATCCTTTGAAACAGGCTATTGTGTTT
ATACATGGGTTTGTTTGGAGTTTTATGGCTTTTGATGATATTTTTGAGGATGTTGAATGGATGAGTCGGTTTTAT
CTTGTGAGTTTTTCATAATCCTCTCTTTAGGTAAAGTTGAGTTTTTGACGTTTGGATAAAATGAAGGTTCGGTAT
GATGTGAGAGGTCATGGGAGGAGTGGAAAACCGGAAGGGGATGAAGCTTGGGAGTGGAAGAGGTTTGCGGAAGAT
TTTGATGCTGTTGTTGAAGCGTACGGGCTTCATAAACCTTTTGTTGCTGGTTGGTACGTCGTTTTTTTGTTTATG
ATTTCTTCTCGTGGGTGAATTATTTCTCATCATTTTGGATATTCATAGGAGTTTAGGAGGTGAGTCTATCACAAA
GTTTAAAATTAAATTTAGCCGGAGTACATATAATTAACATTGCGATTTTTTTAATGTAGGTTGTCATTTGTTGGA
TATACTCACACTTCATCCGGTGGATTATGTTGCTGGCATTATTAACATCGCAGGTGCGACGTATTTGGATGATAC
GCAATTGGAGAAATTGGCTACTCCGGAAGGAAGAGATTATATTCATCGAATGTCAGTTTTACCGAGTGTTGAGGA
TTTTCAATCTGGAGCAAAGGATTTTGTGGATGCGTGTTGTCGGACGTTGCCATATGAAGTGCGAGAACGGTGTCT
AGGGAATATAATGATCCAACCGAGAAGTACTATGGTTCATTCTCTTACGAGAAAACAGAGGGTGGAGACGTTTGA
GATGGTGGGGAAGACGATGTTGCCTTGTTTACTGATTTTTGGGGATGAAGATGAGTTGATTATGATTGATGAGTT
GGAGAGACAGTATAGGGAGGTGTGGAGGAATTTGACTGTGGAAGTGGTAAAGGGCGGTTGCCATGTTCCGTGGAC
GAAGACGCAACGAGATGTGGCCGCGGTTTTTAGCAAGAAGACGTTGGCTTGGATAGATTGCGTTATGCAGTCTCA
GAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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