Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|023870
Gene name
Locationscaffold_11:607913..608895
Strand+
Gene length (bp)982
Transcript length (bp)873
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 3.4E-10 36 278
PF12146 Hydrolase_4 Serine aminopeptidase, S33 7.9E-08 35 148
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 4.7E-07 34 116

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|023870
MTRDLEVNTSRFVKSADGTEIYTDATGNRSPSSPALVLVHGIFMNKGAFNPIFDDSKWTSSLFLVRYDTRGHGRS
GKSVAEEAWESKRFAEDFEAVCREFEVREAYVLGWSIGAAVLADIMTYTTSVKILGFINVAGVVSVDPSIKRRSS
RPLVREIGGILLSPPSVDAFHEALFQFLHICSDELSPELFRILLEGMVMQPRGVAVWAFKRKQNAEKMLQEARGG
RLPLLGISGLKDKSLIVEELKGELEDLGWKRMTYRYIQDADHIPWVSCAEEFREIVLTWIKELTP*
Coding >AgabiH97|023870
ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG
ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGCATTTAAT
CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTGCGGTACGATACCCGTGGACATGGTAGAAGC
GGCAAATCGGTTGCCGAGGAAGCCTGGGAATCCAAACGGTTCGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTC
GAAGTAAGAGAAGCATATGTCTTGGGGTGGAGTATCGGTGCCGCTGTGCTCGCTGATATCATGACCTACACCACT
TCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGTATCCGTGGACCCTTCGATCAAACGACGCTCATCT
CGTCCACTGGTACGTGAAATCGGGGGTATACTCCTATCCCCTCCTTCCGTAGATGCCTTCCACGAAGCTTTATTT
CAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCTCTTCCGCATTTTACTGGAAGGAATGGTCATGCAG
CCACGGGGAGTAGCAGTGTGGGCTTTTAAAAGAAAGCAGAATGCTGAGAAGATGTTGCAAGAGGCGCGAGGCGGG
AGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAGTCATTGATTGTCGAGGAATTGAAAGGAGAGTTGGAA
GACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGACGCGGACCACATTCCGTGGGTGTCTTGTGCAGAA
GAGTTTAGAGAAATTGTATTGACGTGGATAAAGGAGTTAACGCCATAA
Transcript >AgabiH97|023870
ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG
ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGCATTTAAT
CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTGCGGTACGATACCCGTGGACATGGTAGAAGC
GGCAAATCGGTTGCCGAGGAAGCCTGGGAATCCAAACGGTTCGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTC
GAAGTAAGAGAAGCATATGTCTTGGGGTGGAGTATCGGTGCCGCTGTGCTCGCTGATATCATGACCTACACCACT
TCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGTATCCGTGGACCCTTCGATCAAACGACGCTCATCT
CGTCCACTGGTACGTGAAATCGGGGGTATACTCCTATCCCCTCCTTCCGTAGATGCCTTCCACGAAGCTTTATTT
CAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCTCTTCCGCATTTTACTGGAAGGAATGGTCATGCAG
CCACGGGGAGTAGCAGTGTGGGCTTTTAAAAGAAAGCAGAATGCTGAGAAGATGTTGCAAGAGGCGCGAGGCGGG
AGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAGTCATTGATTGTCGAGGAATTGAAAGGAGAGTTGGAA
GACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGACGCGGACCACATTCCGTGGGTGTCTTGTGCAGAA
GAGTTTAGAGAAATTGTATTGACGTGGATAAAGGAGTTAACGCCATAA
Gene >AgabiH97|023870
ATGACCAGAGACTTGGAAGTGAATACCTCTCGCTTCGTGAAGTCAGCTGATGGTACGGAAATATATACAGACGCG
ACGGGCAACCGCTCGCCAAGCTCCCCGGCCCTAGTTTTGGTCCATGGTATTTTCATGAACAAAGGCGCATTTAAT
CCTATCTTTGACGATTCCAAATGGACCTCTAGTCTATTCCTAGTAAGCCAAGTTGGCAGCATGGTGAACGTGACT
GAAGCTCATGATACTGACAAGGTGCGGTACGATACCCGTGGACATGGTAGAAGCGGCAAATCGGTTGCCGAGGAA
GCCTGGGAATCCAAACGGTTCGCGGAAGATTTTGAAGCTGTTTGCAGAGAGTTCGAAGTAAGAGAAGCATATGTC
TTGGGGTGGAGTATCGGTGGTGGGCCATTTTCTTTGCTCGATACCAATAGACTCGGCTCTGATGACTTTTTCAGC
CGCTGTGCTCGCTGATATCATGACCTACACCACTTCAGTTAAGATACTTGGCTTCATTAATGTCGCAGGAGTTGT
ATCCGTGGACCCTTCGATCAAACGACGCTCATCTCGTCCACTGGTACGTGAAATCGGGGGTATACTCCTATCCCC
TCCTTCCGTAGATGCCTTCCACGAAGCTTTATTTCAATTCCTCCACATATGCTCTGACGAGCTCTCTCCAGAGCT
CTTCCGCATTTTACTGGAAGGAATGGTCATGCAGCCACGGGGAGTAGCAGTGTGGGCTTTTAAAAGAAAGCAGAA
TGCTGAGAAGATGTTGCAAGAGGCGCGAGGCGGGAGACTTCCACTCCTGGGCATCAGCGGCTTAAAGGATAAGTC
ATTGATTGTCGAGGAATTGAAAGGAGAGTTGGAAGACTTGGGGTGGAAAAGGATGACGTATCGGTATATACAAGA
CGCGGACCACATTCCGTGGGTGTCTTGTGCAGAAGAGTTTAGAGAAATTGTATTGACGTGGATAAAGGAGTTAAC
GCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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