Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|023720
Gene name
Location	scaffold_11:577435..578764
Strand	-
Gene length (bp)	1329
Transcript length (bp)	1056
Coding sequence length (bp)	1056
Protein length (aa)	352

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF20434	BD-FAE	BD-FAE	2.5E-18	96	213
PF07859	Abhydrolase_3	alpha/beta hydrolase fold	2.5E-10	113	235
PF00135	COesterase	Carboxylesterase family	5.2E-08	91	217

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q29499\|ACES_RABIT	Acetylcholinesterase (Fragment) OS=Oryctolagus cuniculus GN=ACHE PE=2 SV=1	90	238	2.0E-06
sp\|P23795\|ACES_BOVIN	Acetylcholinesterase OS=Bos taurus GN=ACHE PE=1 SV=2	90	238	2.0E-06
sp\|O62763\|ACES_FELCA	Acetylcholinesterase OS=Felis catus GN=ACHE PE=3 SV=1	90	238	2.0E-06
sp\|Q9SX25\|CXE6_ARATH	Probable carboxylesterase 6 OS=Arabidopsis thaliana GN=CXE6 PE=2 SV=1	98	247	3.0E-06
sp\|P21836\|ACES_MOUSE	Acetylcholinesterase OS=Mus musculus GN=Ache PE=1 SV=1	90	238	5.0E-06

GO

GO Term	Description	Terminal node
GO:0016787	hydrolase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	2	24	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|023720 MFLFPFILVFTVVYSLFSTVTSTLRQHYFRLFQALSKYKEVMDAVSRLKDEGKIEIFDVLGPTVMAFNEAMNNDL SAITGVQRSTFKYGTEERHQLDIYYPPTIQSSKTPVLFWIYGGGFVAGDRVLPLPSLSYPNVGAFFARQGAIMVV PDYRLASPPMSAQYPKPVEDIRDAVQWITANRDKLMSQTTPNPDTDNIFMLGHSAGAVHLATLLLEPEVLAVHSP LRSKIRGAVLLAGYYYYDPRSQLGEPFQLYYGDKQESHSALTLLRSAKSKGLNTLPNILFGESEWDPPIVEEIRK KFRHELETFLQRPINHLIAKRHNHISIFAALSTGQGEEWALEVMDWIRSLA*
Coding	>AgabiH97\|023720 ATGTTTTTATTTCCTTTTATTCTCGTATTTACCGTTGTTTACTCTTTATTTTCAACGGTAACTTCAACGTTACGA CAACACTACTTCCGACTCTTTCAGGCTTTGAGCAAGTACAAAGAAGTCATGGACGCCGTATCGAGGTTGAAAGAT GAAGGGAAAATAGAGATTTTTGATGTTCTTGGTCCCACTGTTATGGCTTTTAATGAAGCCATGAACAATGATTTG TCTGCTATTACTGGCGTGCAGAGGTCTACATTCAAGTACGGAACCGAAGAACGCCACCAACTCGATATATACTAT CCTCCGACAATACAATCGTCGAAAACACCTGTCCTCTTCTGGATTTATGGAGGCGGTTTTGTAGCAGGAGATCGC GTCCTTCCTCTTCCCTCACTGAGCTATCCTAATGTCGGCGCATTCTTTGCTCGGCAAGGCGCTATCATGGTTGTT CCCGACTATCGCCTTGCGTCCCCTCCTATGTCTGCTCAATACCCTAAACCGGTTGAAGACATACGAGACGCCGTT CAGTGGATAACCGCAAATCGAGATAAACTTATGAGTCAAACCACGCCGAACCCCGACACAGATAACATCTTCATG CTTGGTCATTCAGCTGGAGCAGTTCACCTTGCCACGTTATTGCTGGAACCCGAAGTTCTTGCCGTGCATTCTCCT CTCCGATCCAAAATTAGAGGTGCCGTTCTCCTGGCAGGGTATTATTACTATGATCCCCGTTCTCAGTTGGGCGAG CCCTTCCAGCTGTATTATGGCGATAAGCAGGAATCTCATTCGGCCCTCACCTTGTTGAGATCAGCCAAAAGTAAA GGACTCAATACGCTACCGAATATCTTGTTCGGTGAAAGCGAGTGGGATCCTCCGATTGTCGAGGAAATCAGGAAG AAATTTCGGCATGAACTCGAGACTTTCCTTCAGCGACCCATCAACCATTTGATCGCCAAAAGGCATAATCATATC AGTATATTCGCTGCTCTTTCGACTGGGCAAGGAGAGGAATGGGCTTTGGAGGTGATGGATTGGATACGGTCTCTT GCATAA
Transcript	>AgabiH97\|023720 ATGTTTTTATTTCCTTTTATTCTCGTATTTACCGTTGTTTACTCTTTATTTTCAACGGTAACTTCAACGTTACGA CAACACTACTTCCGACTCTTTCAGGCTTTGAGCAAGTACAAAGAAGTCATGGACGCCGTATCGAGGTTGAAAGAT GAAGGGAAAATAGAGATTTTTGATGTTCTTGGTCCCACTGTTATGGCTTTTAATGAAGCCATGAACAATGATTTG TCTGCTATTACTGGCGTGCAGAGGTCTACATTCAAGTACGGAACCGAAGAACGCCACCAACTCGATATATACTAT CCTCCGACAATACAATCGTCGAAAACACCTGTCCTCTTCTGGATTTATGGAGGCGGTTTTGTAGCAGGAGATCGC GTCCTTCCTCTTCCCTCACTGAGCTATCCTAATGTCGGCGCATTCTTTGCTCGGCAAGGCGCTATCATGGTTGTT CCCGACTATCGCCTTGCGTCCCCTCCTATGTCTGCTCAATACCCTAAACCGGTTGAAGACATACGAGACGCCGTT CAGTGGATAACCGCAAATCGAGATAAACTTATGAGTCAAACCACGCCGAACCCCGACACAGATAACATCTTCATG CTTGGTCATTCAGCTGGAGCAGTTCACCTTGCCACGTTATTGCTGGAACCCGAAGTTCTTGCCGTGCATTCTCCT CTCCGATCCAAAATTAGAGGTGCCGTTCTCCTGGCAGGGTATTATTACTATGATCCCCGTTCTCAGTTGGGCGAG CCCTTCCAGCTGTATTATGGCGATAAGCAGGAATCTCATTCGGCCCTCACCTTGTTGAGATCAGCCAAAAGTAAA GGACTCAATACGCTACCGAATATCTTGTTCGGTGAAAGCGAGTGGGATCCTCCGATTGTCGAGGAAATCAGGAAG AAATTTCGGCATGAACTCGAGACTTTCCTTCAGCGACCCATCAACCATTTGATCGCCAAAAGGCATAATCATATC AGTATATTCGCTGCTCTTTCGACTGGGCAAGGAGAGGAATGGGCTTTGGAGGTGATGGATTGGATACGGTCTCTT GCATAA
Gene	>AgabiH97\|023720 ATGTTTTTATTTCCTTTTATTCTCGTATTTACCGTTGTTTACTCTTTGTCTGTACTCTCGTATATAAGTGACCTT GTCGTAGATAGAACGAGGCGACAAGTGCCTCGAGTAGTTTGTCTAGTTCAATCTCTACTCGCTACTTAACTGAAG ATTTTCAACGGTAACTTCAACGTTACGACAACACTACTTCCGACTCTTTCAGGCTTTGAGCAAGTACAAGTTAGT ACATTTTCATTCCTCCGGCTTCATCACCCACTGAATCTAGCCCAACCACGCTCTGCAACCAAAGAGAAGTCATGG ACGCCGTATCGAGGTTGAAAGATGAAGGGAAAATAGAGATTTTTGATGTTCTTGGTCCCAGTACGTTCTAGCTGC TTGTTTAATGAACCACTGGACTCATTGAATCTCAGCTGTTATGGCTTTTAATGAAGCCATGAACAATGATTTGTC TGCTATTACTGGCGTGCAGAGGTCTACATTCAAGTACGGAACCGAAGAACGCCACCAAGTACGTCACCCTCGAAA GGCCTATCAATTTAATTCACAACTTTGATGCAGCTCGATATATACTATCCTCCGACAATACAATCGTCGAAAACA CCTGTCCTCTTCTGGATTTATGGAGGCGGTTTTGTAGCAGGAGATCGCGTCCTTCCTCTTCCCTCACTGAGCTAT CCTAATGTCGGCGCATTCTTTGCTCGGCAAGGCGCTATCATGGTTGTTCCCGACTATCGCCTTGCGTCCCCTCCT ATGTCTGCTCAATACCCTAAACCGGTTGAAGACATACGAGACGCCGTTCAGTGGATAACCGCAAATCGAGATAAA CTTATGAGTCAAACCACGCCGAACCCCGACACAGATAACATCTTCATGCTTGGTCATTCAGCTGGAGCAGTTCAC CTTGCCACGTTATTGCTGGAACCCGAAGTTCTTGCCGTGCATTCTCCTCTCCGATCCAAAATTAGAGGTGCCGTT CTCCTGGCAGGGTATTATTACTATGATCCCCGTTCTCAGTTGGGCGAGCCCTTCCAGCTGTATTATGGCGATAAG CAGGAATCTCATTCGGCCCTCACCTTGTTGAGATCAGCCAAAAGTAAAGGACTCAATACGCTACCGAATATCTTG TTCGGTGAAAGCGAGTGGGATCCTCCGATTGTCGAGGAAATCAGGAAGAAATTTCGGCATGAACTCGAGACTTTC CTTCAGCGACCCATCAACCATTTGATCGCCAAAAGGCATAATCATATCAGTATATTCGCTGCTCTTTCGACTGGG CAAGGAGAGGAATGGGCTTTGGAGGTGATGGATTGGATACGGTCTCTTGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail