Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|023370
Gene name
Location	scaffold_11:507213..508770
Strand	+
Gene length (bp)	1557
Transcript length (bp)	1329
Coding sequence length (bp)	1329
Protein length (aa)	443

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01454	MAGE	MAGE homology domain	7.3E-46	74	381

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|023370 MAPTRRQASQSQRPANGRSQRDGPARSQATRRARVESDDEVDENEMDVDAEHSEAENAEGEGGAADIRLKAADLV RLALFHEARRMPLRREDINKKVLPNSTRIFKAVFDRAQSILHETFGLQLQELPSKAGLDQEAAAASAEKKGKKST SGTQDPQGEDELEEARKATMGKRRATAVGSKTYILRSILDARLIEIANKTDASIVEEEALLNFATGDLFGGDGNS GAGAAIFLDDDDEWDDGAELHPRTYGSIFSWGQNDQLGALGVLYVILALILVNGKVVQERALRGQLKELGLPSTA GRSPILFTTIATHRAMKVDDYLSLLLRQGYLDRQIVGEVSGAGRKRARGKVGGDAHNDMGMQAGDMYEWRWGARA FCEVGETDIAKFVAEFMVNYNTGGKAGDEEEDDEGTEGRKKTKVEKMYMGVRKAAGGSLAAIRDWNN*
Coding	>AgabiH97\|023370 ATGGCTCCAACACGCAGACAAGCCTCGCAGTCCCAAAGACCAGCAAATGGACGATCGCAGCGTGATGGGCCAGCA CGTTCGCAGGCGACCCGACGAGCACGGGTAGAGTCGGATGATGAAGTCGACGAAAATGAGATGGATGTCGACGCA GAACATTCAGAAGCTGAGAATGCAGAAGGTGAAGGTGGGGCAGCTGATATCCGACTAAAGGCTGCGGATCTGGTT CGACTAGCCCTATTTCACGAAGCACGGCGGATGCCATTGAGACGCGAAGATATCAATAAAAAAGTCCTACCAAAT TCGACGAGGATTTTCAAAGCAGTCTTTGATCGGGCTCAGTCGATACTCCATGAGACGTTCGGTCTTCAACTCCAG GAGCTACCATCGAAAGCTGGTTTGGATCAGGAAGCTGCAGCAGCGTCGGCAGAAAAAAAAGGAAAGAAGTCAACT TCAGGTACGCAGGATCCCCAGGGTGAAGACGAGCTGGAAGAAGCTAGAAAGGCTACTATGGGAAAGAGACGAGCT ACTGCTGTCGGATCAAAGACATACATTTTACGTTCCATCCTGGACGCTAGACTCATTGAGATAGCTAACAAAACG GATGCTAGTATCGTGGAAGAGGAAGCTCTCCTTAACTTTGCTACTGGTGATCTCTTTGGTGGCGATGGCAACTCT GGAGCTGGCGCTGCTATATTTTTGGATGATGACGATGAATGGGATGATGGCGCAGAATTGCATCCTCGGACCTAT GGTTCGATTTTTTCTTGGGGCCAAAACGACCAGCTTGGGGCTTTGGGTGTTCTGTATGTTATACTCGCGCTCATA TTGGTCAATGGAAAGGTCGTACAAGAGCGAGCGCTGCGCGGTCAATTGAAAGAACTCGGTCTCCCATCCACCGCT GGTCGCTCACCCATACTATTCACAACTATAGCTACACATCGCGCCATGAAAGTCGACGATTATCTTTCTCTACTT CTTCGTCAGGGTTATCTCGACCGGCAAATTGTTGGCGAAGTTTCCGGCGCGGGCCGTAAACGGGCGAGAGGAAAA GTCGGAGGTGACGCTCATAATGATATGGGTATGCAAGCTGGTGACATGTATGAGTGGCGGTGGGGCGCACGAGCG TTTTGTGAGGTGGGTGAGACGGACATTGCGAAATTTGTTGCGGAATTTATGGTTAATTATAATACGGGTGGAAAA GCTGGGGATGAGGAAGAGGATGATGAAGGGACTGAAGGAAGGAAGAAAACAAAGGTGGAGAAAATGTATATGGGC GTACGTAAAGCTGCTGGAGGAAGTTTGGCTGCGATAAGGGACTGGAACAACTAA
Transcript	>AgabiH97\|023370 ATGGCTCCAACACGCAGACAAGCCTCGCAGTCCCAAAGACCAGCAAATGGACGATCGCAGCGTGATGGGCCAGCA CGTTCGCAGGCGACCCGACGAGCACGGGTAGAGTCGGATGATGAAGTCGACGAAAATGAGATGGATGTCGACGCA GAACATTCAGAAGCTGAGAATGCAGAAGGTGAAGGTGGGGCAGCTGATATCCGACTAAAGGCTGCGGATCTGGTT CGACTAGCCCTATTTCACGAAGCACGGCGGATGCCATTGAGACGCGAAGATATCAATAAAAAAGTCCTACCAAAT TCGACGAGGATTTTCAAAGCAGTCTTTGATCGGGCTCAGTCGATACTCCATGAGACGTTCGGTCTTCAACTCCAG GAGCTACCATCGAAAGCTGGTTTGGATCAGGAAGCTGCAGCAGCGTCGGCAGAAAAAAAAGGAAAGAAGTCAACT TCAGGTACGCAGGATCCCCAGGGTGAAGACGAGCTGGAAGAAGCTAGAAAGGCTACTATGGGAAAGAGACGAGCT ACTGCTGTCGGATCAAAGACATACATTTTACGTTCCATCCTGGACGCTAGACTCATTGAGATAGCTAACAAAACG GATGCTAGTATCGTGGAAGAGGAAGCTCTCCTTAACTTTGCTACTGGTGATCTCTTTGGTGGCGATGGCAACTCT GGAGCTGGCGCTGCTATATTTTTGGATGATGACGATGAATGGGATGATGGCGCAGAATTGCATCCTCGGACCTAT GGTTCGATTTTTTCTTGGGGCCAAAACGACCAGCTTGGGGCTTTGGGTGTTCTGTATGTTATACTCGCGCTCATA TTGGTCAATGGAAAGGTCGTACAAGAGCGAGCGCTGCGCGGTCAATTGAAAGAACTCGGTCTCCCATCCACCGCT GGTCGCTCACCCATACTATTCACAACTATAGCTACACATCGCGCCATGAAAGTCGACGATTATCTTTCTCTACTT CTTCGTCAGGGTTATCTCGACCGGCAAATTGTTGGCGAAGTTTCCGGCGCGGGCCGTAAACGGGCGAGAGGAAAA GTCGGAGGTGACGCTCATAATGATATGGGTATGCAAGCTGGTGACATGTATGAGTGGCGGTGGGGCGCACGAGCG TTTTGTGAGGTGGGTGAGACGGACATTGCGAAATTTGTTGCGGAATTTATGGTTAATTATAATACGGGTGGAAAA GCTGGGGATGAGGAAGAGGATGATGAAGGGACTGAAGGAAGGAAGAAAACAAAGGTGGAGAAAATGTATATGGGC GTACGTAAAGCTGCTGGAGGAAGTTTGGCTGCGATAAGGGACTGGAACAACTAA
Gene	>AgabiH97\|023370 ATGGCTCCAACACGCAGACAAGCCTCGCAGTCCCAAAGACCAGCAAATGGACGATCGCAGCGTGATGGGCCAGCA CGTTCGCAGGCGACCCGACGAGCACGGGTAGAGTCGGATGATGAAGTCGACGAAAATGAGATGGATGTCGACGCA GAACATTCAGAAGCTGAGAATGCAGAAGGTGAAGGTGGGGCAGCTGTAAGCCACTATTCCAAAGATCTTTTTCTT GCTGTATTCACCCTTTCCAGGATATCCGACTAAAGGCTGCGGATCTGGTTCGACTAGCCCTATTTCACGAAGCAC GGCGGATGCCATTGAGACGCGAAGATATCAATAAAAAAGGTTCATTGCTTCCCAATTCCTGAGTCATCTTATTCT GAAAGCGTCGCGTCATAAAGTCCTACCAAATTCGACGAGGATTTTCAAAGCAGTCTTTGATCGGGCTCAGTCGAT ACTCCATGAGACGTTCGGTCTTCAACTCCAGGAGCTACCATCGAAAGCTGGTTTGGATCAGGAAGCTGCAGCAGC GTCGGCAGAAAAAAAAGGAAAGAAGTCAACTTCAGGTACGCAGGATCCCCAGGGTGAAGACGAGCTGGAAGAAGC TAGAAAGGCTACTATGGGAAAGAGACGAGGTCTGCCTAACCGTCGGTCGCATTATTGACCACCTATCTGACTCGA ACTGTTATTTTTTTTTTCATAGCTACTGCTGTCGGATCAAAGACATACATTTTACGTTCCATCCTGGACGCTAGA CTCATTGAGATAGCTAACAAAACGGATGCTAGTATCGTGGAAGAGGAAGCTCTCCTTAACTTTGCTACTGGTGAT CTCTTTGGTGGCGATGGCAACTCTGGAGCTGGCGCTGCTATATTTTTGGATGATGACGATGAATGGGATGATGGC GCAGAATTGCATCCTCGGACCTATGGTTCGATTTTTTCTTGGGGCCAAAACGACCAGCTTGGGGCTTTGGGTGTT CTGTATGTTATACTCGCGCTCATATTGGTCAATGGAAAGGTCGTACAAGAGCGTAAGCTTTACTTTATTTTATCA ATGAAATGGAGAATTGAAGTTTATTTTGTAGGAGCGCTGCGCGGTCAATTGAAAGAACTCGGTCTCCCATCCACC GCTGGTCGCTCACCCATACTATTCACAACTATAGCTACACATCGCGCCATGAAAGTCGACGATTATCTTTCTCTA CTTCTTCGTCAGGGTTATCTCGACCGGCAAATTGTTGGCGAAGTTTCCGGCGCGGGCCGTAAACGGGCGAGAGGA AAAGTCGGAGGTGACGCTCATAATGATATGGGTATGCAAGCTGGTGACATGTATGAGTGGCGGTGGGGCGCACGA GCGTTTTGTGAGGTGGGTGAGACGGACATTGCGAAATTTGTTGCGGAATTTATGGTTAATTATAATACGGGTGGA AAAGCTGGGGATGAGGAAGAGGATGATGAAGGGACTGAAGGAAGGAAGAAAACAAAGGTGGAGAAAATGTATATG GGCGTACGTAAAGCTGCTGGAGGAAGTTTGGCTGCGATAAGGGACTGGAACAACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail