Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|022370
Gene name
Locationscaffold_11:237319..238501
Strand+
Gene length (bp)1182
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|022370
MYSSFFTLILAVAGSVVNALPTADAPALVPRDCSAEVAALNMKRAEKRGLDARSVWPGPQNTTCVLAPESPKENY
VAGMPARSDIAGGQDGLEFVLDVAVMDVTTCKVLPNTMVELWSPNAMGQYGNFLRGGTTTSSGGIAEFRTIYPGM
SKGANHVNIAVHTSSSMSSSTTHVGKLFFVDRWNELILGTSPYTQNSNPKVLDNQDADYRNAVSKGYSPVISITS
IHDDWPEGVVGIVTVGVNPH*
Coding >AgabiH97|022370
ATGTACTCCAGTTTCTTCACTCTCATCCTCGCCGTCGCTGGCTCGGTTGTTAATGCCCTCCCAACGGCTGATGCC
CCAGCGCTGGTTCCGCGTGATTGCTCTGCTGAAGTAGCTGCGCTCAACATGAAGCGCGCTGAGAAACGTGGTCTC
GATGCACGTTCAGTCTGGCCCGGTCCTCAGAACACGACATGCGTTCTTGCCCCCGAATCACCCAAAGAAAATTAC
GTCGCTGGAATGCCTGCCAGATCCGACATTGCCGGCGGACAAGATGGACTCGAGTTTGTCCTCGACGTGGCTGTC
ATGGATGTCACCACCTGTAAAGTGCTTCCCAACACAATGGTTGAACTCTGGTCCCCTAACGCGATGGGTCAATAC
GGAAACTTCCTCCGAGGCGGCACTACCACATCATCGGGCGGTATTGCTGAATTCAGGACCATATACCCTGGAATG
TCAAAGGGTGCCAACCACGTTAACATTGCAGTCCACACCTCTTCCAGCATGTCTTCTTCCACCACTCACGTTGGA
AAACTTTTCTTCGTGGACAGGTGGAATGAGCTTATCCTTGGTACATCCCCATACACCCAAAATTCTAACCCCAAG
GTTTTGGACAATCAAGACGCTGACTACAGGAATGCTGTGAGCAAAGGATATTCCCCCGTTATCTCCATTACTTCT
ATCCATGATGACTGGCCAGAGGGTGTTGTCGGGATCGTCACTGTCGGTGTTAACCCTCACTAA
Transcript >AgabiH97|022370
ATGTACTCCAGTTTCTTCACTCTCATCCTCGCCGTCGCTGGCTCGGTTGTTAATGCCCTCCCAACGGCTGATGCC
CCAGCGCTGGTTCCGCGTGATTGCTCTGCTGAAGTAGCTGCGCTCAACATGAAGCGCGCTGAGAAACGTGGTCTC
GATGCACGTTCAGTCTGGCCCGGTCCTCAGAACACGACATGCGTTCTTGCCCCCGAATCACCCAAAGAAAATTAC
GTCGCTGGAATGCCTGCCAGATCCGACATTGCCGGCGGACAAGATGGACTCGAGTTTGTCCTCGACGTGGCTGTC
ATGGATGTCACCACCTGTAAAGTGCTTCCCAACACAATGGTTGAACTCTGGTCCCCTAACGCGATGGGTCAATAC
GGAAACTTCCTCCGAGGCGGCACTACCACATCATCGGGCGGTATTGCTGAATTCAGGACCATATACCCTGGAATG
TCAAAGGGTGCCAACCACGTTAACATTGCAGTCCACACCTCTTCCAGCATGTCTTCTTCCACCACTCACGTTGGA
AAACTTTTCTTCGTGGACAGGTGGAATGAGCTTATCCTTGGTACATCCCCATACACCCAAAATTCTAACCCCAAG
GTTTTGGACAATCAAGACGCTGACTACAGGAATGCTGTGAGCAAAGGATATTCCCCCGTTATCTCCATTACTTCT
ATCCATGATGACTGGCCAGAGGGTGTTGTCGGGATCGTCACTGTCGGTGTTAACCCTCACTAA
Gene >AgabiH97|022370
ATGTACTCCAGTTTCTTCACTCTCATCCTCGCCGTCGCTGGCTCGGTTGTTAATGGCAAGTGCCTCGACATTACG
CTCCACGAAGACTAATTGAACGGACTTGCCAGCCCTCCCAACGGCTGATGCCCCAGCGCTGGTTCCGCGTGATTG
CTCTGCTGAAGTAGCTGCGCTCAACATGAAGCGCGCTGAGAAACGTGGTCTCGATGCACGTTCAGTCTGGCCCGG
TCCTCAGAACGTAAGTCAGACGGCCATAGATATATACGTCTTTCATTGGTCTAACTGTAAACCACAGACGACATG
CGTTCTTGCCCCCGAATCACCCAAAGGTACTTTCGCTCAACCGCTACTCCGTAATCAATGCCTCACTGACATTGT
GATCCTAGAAAATTACGTCGCTGGAATGGTAAGGGCATTGTCTCACCGGCAATAATTTATTTTGTACTAACTGCT
TCATAAGCCTGCCAGATCCGACATTGCCGGCGGACAAGAGTACGTTCCGGTGCTCACAATATATTCCATTGCTTA
AGTTCTTAATCTTCTTGTTTTTATACACAGTGGACTCGAGTTTGTCCTCGACGTGGCTGTCATGGATGTCACCAC
CTGTAAAGTGCTTCCCAACACAATGGTTGAACTCTGGTCCCGTAAGTGAGCGTTTACAAGGATGAGTGGATTATA
CTGATTGATCGCTCAGCTAACGCGATGGGTCAATACGGAAACTTCCTCCGAGGCGGCACTACCACATCATCGGGC
GGTATTGCTGAATTCAGGACCATATACCCTGGAATGTCAAAGGGTGCCAACCACGTTAACATTGCAGTCCACACC
TCTTCCAGCATGTCTTCTTCCACCACTCACGTTGGAAAACTTTTCTTCGTGGACAGGTGGAATGAGCTTATCCTT
GGTACATCCCCATACACCCAAAATTCTAACCCCAAGGTTTTGGACAATCAAGACGCTGACTACAGGAATGCTGTG
AGCAAAGGATATTCCCCCGTTATCTCGTAAGCACTTTTTCTTCTAAAAAATTAGCTTTTTTCCCCCACTAAAACT
TCTCCAGCATTACTTCTATCCATGATGACTGGCCAGAGGGTGTTGTCGGGATCGTCAGTAAGTGTTGTTGTATCA
ATCCATAGATTGTGACTCAGTTAGACTTCCTCAGCTGTCGGTGTTAACCCTCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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