Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|022290
Gene name
Locationscaffold_11:216204..219026
Strand+
Gene length (bp)2822
Transcript length (bp)2178
Coding sequence length (bp)2178
Protein length (aa) 726

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13415 Kelch_3 Galactose oxidase, central domain 4.7E-05 94 139
PF13415 Kelch_3 Galactose oxidase, central domain 7.5E-07 145 197
PF13415 Kelch_3 Galactose oxidase, central domain 1.4E-04 202 251
PF13418 Kelch_4 Galactose oxidase, central domain 3.1E-04 77 123
PF13418 Kelch_4 Galactose oxidase, central domain 2.8E-06 190 244
PF13422 DUF4110 Domain of unknown function (DUF4110) 6.5E-19 630 698
PF13964 Kelch_6 Kelch motif 2.3E-06 191 236
PF01344 Kelch_1 Kelch motif 9.8E-05 190 235

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q08979|KEL3_YEAST Kelch repeat-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL3 PE=1 SV=1 41 507 1.0E-68
sp|Q5R8W1|KLDC4_PONAB Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2 SV=1 18 514 7.0E-66
sp|Q8TBB5|KLDC4_HUMAN Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1 18 549 1.0E-65
sp|Q921I2|KLDC4_MOUSE Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=2 SV=2 18 514 5.0E-64
sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2 84 303 3.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|Q08979|KEL3_YEAST Kelch repeat-containing protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEL3 PE=1 SV=1 41 507 1.0E-68
sp|Q5R8W1|KLDC4_PONAB Kelch domain-containing protein 4 OS=Pongo abelii GN=KLHDC4 PE=2 SV=1 18 514 7.0E-66
sp|Q8TBB5|KLDC4_HUMAN Kelch domain-containing protein 4 OS=Homo sapiens GN=KLHDC4 PE=1 SV=1 18 549 1.0E-65
sp|Q921I2|KLDC4_MOUSE Kelch domain-containing protein 4 OS=Mus musculus GN=Klhdc4 PE=2 SV=2 18 514 5.0E-64
sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2 84 303 3.0E-11
sp|O14248|TEA3_SCHPO Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1 109 261 9.0E-11
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1 59 258 1.0E-09
sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2 90 253 2.0E-09
sp|Q6AXB2|RABEK_XENLA Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk PE=2 SV=1 130 242 3.0E-09
sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1 83 289 4.0E-08
sp|Q5RDA9|FBX42_PONAB F-box only protein 42 OS=Pongo abelii GN=FBXO42 PE=2 SV=1 108 288 4.0E-07
sp|Q6P3S6|FBX42_HUMAN F-box only protein 42 OS=Homo sapiens GN=FBXO42 PE=1 SV=1 108 288 4.0E-07
sp|A8JAM0|DRC7_CHLRE Dynein regulatory complex subunit 7 (Fragment) OS=Chlamydomonas reinhardtii GN=DRC7 PE=1 SV=1 77 264 5.0E-07
sp|Q55A09|Y9963_DICDI Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1 7 264 4.0E-06
sp|P80197|AFK_PHYPO Actin-fragmin kinase OS=Physarum polycephalum PE=1 SV=2 117 264 4.0E-06
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 50 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|022290
MPKKKSNNAAAKAAKKVKAAQKIERKETKKVKKSKNKYHSEDEEEQDLEAVLEAMRKEWEDSHTVTEELVEGPPS
RRASATLTPCPNGSHLWCIGGEYFSEDGRAYFYNDVFRYTPEKDEWRKFVSPTCPGPRSAHAVTSSPVGGGKLFL
FGGEFSSLHQTTFHHYRDFWCFDIGTHSWDRIDTKIRPSARSGHRMTTWKQYIILFGGFYDPGITTRYLNDLWIF
DTHEYRWTQVEFREVDPKPSPRSGFSFLSCAEGVVLHGGYCKEYAKGKRPVGVMLEDTWLLRITIPTEQGATATP
SKPSKNKASQPQLVFKWERKKRASDAYAPSLRSGCTMALWNRSSGAGPTGILFGGVTDEDVHEETLESVFHNDLY
GYQLNGKGKWISMVLKKPKAKGGKKVTRAGKKKEAVKETMRGDQESEGDEDDEDDMSVKSPKALSAPKPSQSLVQ
AVNKDSDDPNLTIPMPRYNAMLAVLRNTLYIYGGILEKGSKEYTLDDFHLVQLDKLERYTCLKESAILIPDGEEE
SSSDEDDDEGDDEDDDEGDEEDDEPEEEPEQGNTEADIRLTEDGVDDELNGNARLKKNTEMTVFTDEVPTNNIQE
PTDEEVEDPDSLRSKANTFMGVSKDVSRSAEDVLSTPLPGETLAMFYARSREYWAQKAYGTSDNRGKELRRDGFA
RAEERYAEYKPILEEVEKILAEAGLDEEEMRRGAALGGGPAASGQSRNRR*
Coding >AgabiH97|022290
ATGCCAAAAAAGAAGAGCAACAATGCTGCCGCAAAAGCTGCAAAGAAAGTCAAGGCTGCACAAAAGATTGAAAGG
AAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAGCAAGATCTCGAGGCG
GTTTTGGAAGCGATGCGAAAAGAATGGGAAGACTCCCACACGGTCACTGAAGAACTGGTAGAAGGTCCACCTAGC
CGGCGCGCGAGTGCAACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGCGGTGAATATTTCAGC
GAGGATGGAAGAGCCTACTTTTATAACGATGTCTTCAGATATACACCGGAGAAGGATGAATGGCGCAAATTCGTC
TCACCCACCTGTCCTGGTCCAAGGTCGGCACATGCCGTAACCTCATCTCCTGTAGGAGGGGGAAAGTTGTTTTTG
TTCGGCGGAGAATTCTCGTCGCTCCATCAGACCACATTCCATCACTATAGGGATTTCTGGTGTTTTGACATAGGA
ACGCACTCTTGGGATCGGATTGACACCAAGATCAGACCCAGTGCTCGATCTGGCCATCGAATGACAACCTGGAAA
CAATATATCATCTTATTCGGCGGGTTTTATGATCCGGGTATCACCACAAGATATCTGAATGATCTATGGATCTTC
GATACGCATGAATACAGGTGGACTCAAGTGGAGTTTCGTGAAGTGGACCCTAAACCATCACCTCGCAGCGGGTTT
TCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATGGTGGATACTGCAAAGAGTATGCGAAGGGAAAGCGTCCG
GTCGGAGTCATGCTTGAAGATACATGGCTACTAAGAATTACGATCCCTACTGAACAAGGAGCTACTGCTACCCCT
TCCAAGCCATCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGGAACGTAAGAAACGTGCATCGGAT
GCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAATAGGAGCAGTGGTGCAGGACCGACAGGA
ATTTTATTCGGCGGTGTGACTGATGAGGATGTCCATGAGGAAACACTGGAGAGCGTATTCCACAACGACTTATAC
GGCTACCAACTTAACGGAAAAGGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCGAAGGGTGGAAAAAAG
GTGACGCGAGCAGGTAAGAAGAAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAGAGCGAAGGTGACGAA
GATGATGAAGATGACATGTCGGTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCGCAATCGCTTGTACAG
GCCGTGAATAAAGATTCAGATGACCCTAATCTAACTATTCCTATGCCGCGTTATAATGCCATGCTCGCGGTGCTG
CGAAACACGCTGTATATATATGGCGGAATCCTTGAAAAGGGATCCAAGGAATACACGTTGGACGACTTCCACCTT
GTACAACTCGACAAATTGGAAAGATACACATGTTTGAAAGAAAGTGCGATCTTGATACCCGATGGTGAAGAAGAG
AGTAGCAGCGATGAGGATGATGACGAAGGCGATGACGAGGATGATGACGAGGGCGACGAGGAAGACGATGAACCT
GAGGAGGAACCAGAGCAAGGCAACACAGAAGCGGATATTAGATTGACTGAAGACGGCGTCGACGATGAGTTGAAT
GGAAATGCGAGATTGAAAAAGAATACAGAGATGACGGTTTTCACTGATGAAGTCCCTACTAATAATATCCAAGAA
CCGACGGATGAAGAGGTCGAAGATCCTGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTATCCAAGGAC
GTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGGGAAACTCTCGCTATGTTTTATGCACGATCC
CGTGAATACTGGGCTCAGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTTGCC
AGGGCTGAAGAACGTTACGCCGAATACAAACCTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGCTTG
GACGAGGAGGAGATGCGCAGAGGTGCTGCACTTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGAAGA
TAA
Transcript >AgabiH97|022290
ATGCCAAAAAAGAAGAGCAACAATGCTGCCGCAAAAGCTGCAAAGAAAGTCAAGGCTGCACAAAAGATTGAAAGG
AAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAGCAAGATCTCGAGGCG
GTTTTGGAAGCGATGCGAAAAGAATGGGAAGACTCCCACACGGTCACTGAAGAACTGGTAGAAGGTCCACCTAGC
CGGCGCGCGAGTGCAACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGCGGTGAATATTTCAGC
GAGGATGGAAGAGCCTACTTTTATAACGATGTCTTCAGATATACACCGGAGAAGGATGAATGGCGCAAATTCGTC
TCACCCACCTGTCCTGGTCCAAGGTCGGCACATGCCGTAACCTCATCTCCTGTAGGAGGGGGAAAGTTGTTTTTG
TTCGGCGGAGAATTCTCGTCGCTCCATCAGACCACATTCCATCACTATAGGGATTTCTGGTGTTTTGACATAGGA
ACGCACTCTTGGGATCGGATTGACACCAAGATCAGACCCAGTGCTCGATCTGGCCATCGAATGACAACCTGGAAA
CAATATATCATCTTATTCGGCGGGTTTTATGATCCGGGTATCACCACAAGATATCTGAATGATCTATGGATCTTC
GATACGCATGAATACAGGTGGACTCAAGTGGAGTTTCGTGAAGTGGACCCTAAACCATCACCTCGCAGCGGGTTT
TCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATGGTGGATACTGCAAAGAGTATGCGAAGGGAAAGCGTCCG
GTCGGAGTCATGCTTGAAGATACATGGCTACTAAGAATTACGATCCCTACTGAACAAGGAGCTACTGCTACCCCT
TCCAAGCCATCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGGAACGTAAGAAACGTGCATCGGAT
GCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAATAGGAGCAGTGGTGCAGGACCGACAGGA
ATTTTATTCGGCGGTGTGACTGATGAGGATGTCCATGAGGAAACACTGGAGAGCGTATTCCACAACGACTTATAC
GGCTACCAACTTAACGGAAAAGGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCGAAGGGTGGAAAAAAG
GTGACGCGAGCAGGTAAGAAGAAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAGAGCGAAGGTGACGAA
GATGATGAAGATGACATGTCGGTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCGCAATCGCTTGTACAG
GCCGTGAATAAAGATTCAGATGACCCTAATCTAACTATTCCTATGCCGCGTTATAATGCCATGCTCGCGGTGCTG
CGAAACACGCTGTATATATATGGCGGAATCCTTGAAAAGGGATCCAAGGAATACACGTTGGACGACTTCCACCTT
GTACAACTCGACAAATTGGAAAGATACACATGTTTGAAAGAAAGTGCGATCTTGATACCCGATGGTGAAGAAGAG
AGTAGCAGCGATGAGGATGATGACGAAGGCGATGACGAGGATGATGACGAGGGCGACGAGGAAGACGATGAACCT
GAGGAGGAACCAGAGCAAGGCAACACAGAAGCGGATATTAGATTGACTGAAGACGGCGTCGACGATGAGTTGAAT
GGAAATGCGAGATTGAAAAAGAATACAGAGATGACGGTTTTCACTGATGAAGTCCCTACTAATAATATCCAAGAA
CCGACGGATGAAGAGGTCGAAGATCCTGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTATCCAAGGAC
GTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGGGAAACTCTCGCTATGTTTTATGCACGATCC
CGTGAATACTGGGCTCAGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTTGCC
AGGGCTGAAGAACGTTACGCCGAATACAAACCTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGCTTG
GACGAGGAGGAGATGCGCAGAGGTGCTGCACTTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGAAGA
TAA
Gene >AgabiH97|022290
ATGCCAAAAAAGAAGAGCAACAATGCTGCCGCAAAAGCTGCAAAGAAAGTCAAGGCTGCACAAAAGATTGAAAGG
AAAGAGACCAAAAAAGTGAAAAAGTCCAAGAACAAGTATCATTCTGAAGATGAGGAAGAGCAAGATCTCGAGGCG
GTTTTGGAAGCGGTATATTCACATCTGTTTTACATTTGTGCTCTAATCTTGACTGACGTTGTTCACCGTAGTAGA
TGCGAAAAGAATGGGAAGACTCCCACACGGTCACTGAAGAACTGGTAGAAGGTCCACCTAGCCGGCGCGCGAGTG
CAACTCTTACTCCCTGCCCGAATGGAAGTCATCTATGGTGCATCGGCGGTGAATATTTCAGCGAGGATGGAAGAG
CCGTACGTATCCAAAGGGTTGTACTGCAATACCAGAACTTATGAGCGTACGCAGTACTTTTATAACGATGTCTTC
AGATATACACCGGAGAAGGATGAATGGCGCAAATTCGTCTCACCCACCTGTCCTGGTCCAAGGTCGGCACATGCC
GTAACCTCATCTCCTGTAGGAGGGGGAAAGTTGTTTTTGTTCGGTATATGGCGGTAGATCTTTACCTCTCAATGC
CTTAATTGACTCGACGATCGGCAGGCGGAGAATTCTCGTCGCTCCATCAGACCACATTCCATCACTATAGGGATT
TCTGGTGTTTTGACATAGGAACGCACTCTTGGGATCGGATTGACACCAAGATCAGACCCAGTGCTCGATCTGGCC
ATCGGTGAGCTTCATTATAGCGGCCTCACCATTCGTCAAGACTTAATTGTTGTAGAATGACAACCTGGAAACAAT
ATATCATCTTATTCGGCGGGTTTTATGATCCGGGTATCACCAGTAAGCCTTCCCTCATGATGTATTCATTCCTCC
TTGATCACCTCTCAAATTAGCAAGATATCTGAATGATCTATGGATCTTCGATACGCATGAATACAGGTGGACTCA
AGTGGAGTTTCGTGAAGTGGACCCTAAACCATCGTAAGCTGATTGTGCACCCCAAAGTCACCAATCGTTAACCAT
ACAACAGACCTCGCAGCGGGTTTTCATTCTTGTCATGCGCCGAAGGAGTTGTTTTACATGGTGGATACTGCAAAG
AGTATGCGAAGGGAAAGCGTCCGGTCGGAGTCATGCTTGAAGATACATGGCTACTAAGGTCCGTCTCATATGTTT
TAACTCTTCTTCGTAACGAATCGGCTTCACCGTGCTCCAGAATTACGATCCCTACTGAACAAGGAGCTACTGCTA
CCCCTTCCAAGCCATCCAAAAACAAGGCCTCCCAACCACAACTCGTGTTCAAATGGGAACGTAAGAAACGTGCAT
CGGATGCTTACGCGCCGTCCCTTCGTTCTGGATGTACCATGGCCTTGTGGAATAGGAGCAGTGGTGCAGGACCGA
CAGGAATTTTATTCGGCGGTGTGACTGATGAGGATGTCCATGAGGAAACACTGGAGAGCGTATTCCACAACGACT
TGTCTGTATCATTCTCTCCTAGATCAGTATTTGTCATTGATTCTTTATAGATACGGCTACCAACTTAACGGAAAA
GGCAAATGGATCTCGATGGTGCTGAAGAAACCAAAAGCGAAGGGTGGAAAAAAGGTGACGCGAGCAGGTAAGAAG
AAAGAAGCTGTCAAAGAAACAATGCGGGGAGATCAAGAGAGCGAAGGTGACGAAGATGATGAAGATGACATGTCG
GTCAAGTCACCAAAGGCGCTAAGCGCCCCTAAACCCTCGCAATCGCTTGTACAGGCCGTGAATAAAGATTCAGAT
GACCCTAATCTAACTATTCCTATGCCGCGTTATAATGCCATGCTCGCGGTGCTGCGAAACACGCTGTATATGTGA
GTCCTTTCGATCGTCGTCGTCCAATCGGATGCATTGAACCCATTGTAGATATGGCGGAATCCTTGAAAAGGGATC
CAAGGAATACACGTTGGACGACTTCCACCTTGTACAACTCGACAAATTGGAAAGATACACATGTTTGAAAGAAAG
TGCGATCTTGATACCCGATGGTGAAGAAGAGAGTAGCAGCGATGAGGATGATGACGAAGGCGATGACGAGGATGA
TGACGAGGGCGACGAGGAAGACGATGAACCTGAGGAGGAACCAGAGCAAGGCAACACAGAAGCGGATATTAGATT
GACTGAAGACGGCGTCGACGATGAGTTGAATGGAAATGCGAGATTGAAAAAGAATACAGAGATGACGGTTTTCAC
TGATGAAGTCCCTACTAATAATATCCAAGAACCGACGGATGAAGAGGTCGAAGATCCTGTACGTCAGAGCATGTC
TAATCAAGCCTTCCACTAACGTATCTTAGGATTCATTACGTTCAAAAGCAAATACGTTCATGGGCGTATCCAAGG
ACGTCTCTCGCTCCGCTGAAGACGTGTTGAGTACCCCGCTTCCCGGGGAAACTCTCGCTATGTTTTATGCACGAT
CCCGTATGCTTACTCAAACATATCAAATACTCTTGATTATGGCTCATTTCAAGAACACAGGTGAATACTGGGCTC
AGAAAGCGTACGGGACGAGCGACAACAGAGGAAAAGAACTTCGACGGGACGGCTTTGCCAGGGCTGAAGAACGTT
ACGGTAAGATTACCCTCTAGGTTGTGATATAGTAATTATGATGCCGGTCTTTGATGCTTCTAGCCGAATACAAAC
CTATACTGGAAGAAGTTGAGAAGATTTTAGCAGAAGCGGGCTTGGACGAGGAGGAGATGCGCAGAGGTGCTGCAC
TTGGTGGTGGCCCGGCTGCGAGTGGCCAGAGTCGCAACAGAAGATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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