Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|022190
Gene name
Locationscaffold_11:176545..178847
Strand+
Gene length (bp)2302
Transcript length (bp)1563
Coding sequence length (bp)1563
Protein length (aa) 521

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00394 Cu-oxidase Multicopper oxidase 3.1E-40 160 312
PF07731 Cu-oxidase_2 Multicopper oxidase 1.7E-33 371 490
PF07732 Cu-oxidase_3 Multicopper oxidase 7.2E-36 32 148

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q12541|LAC1_AGABI Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1 1 520 0.0E+00
sp|Q12542|LAC2_AGABI Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1 1 520 0.0E+00
sp|Q01679|LAC1_PHLRA Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2 4 516 3.0E-159
sp|Q99055|LAC4_TRAVI Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1 25 516 2.0E-157
sp|Q12719|LAC4_TRAVE Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 25 516 3.0E-157
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q12541|LAC1_AGABI Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1 1 520 0.0E+00
sp|Q12542|LAC2_AGABI Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1 1 520 0.0E+00
sp|Q01679|LAC1_PHLRA Laccase OS=Phlebia radiata GN=LAC PE=1 SV=2 4 516 3.0E-159
sp|Q99055|LAC4_TRAVI Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1 25 516 2.0E-157
sp|Q12719|LAC4_TRAVE Laccase-4 OS=Trametes versicolor GN=LCC4 PE=3 SV=1 25 516 3.0E-157
sp|Q12729|LAC1_PLEOS Laccase-1 OS=Pleurotus ostreatus GN=POX1 PE=2 SV=1 23 516 9.0E-156
sp|Q12739|LAC2_PLEOS Laccase-2 OS=Pleurotus ostreatus GN=POX2 PE=1 SV=1 28 516 4.0E-155
sp|Q99046|LAC2_TRAVI Laccase-2 OS=Trametes villosa GN=LCC2 PE=3 SV=1 7 520 2.0E-150
sp|Q12718|LAC2_TRAVE Laccase-2 OS=Trametes versicolor GN=LCC2 PE=1 SV=1 7 520 7.0E-150
sp|O59896|LAC1_PYCCI Laccase OS=Pycnoporus cinnabarinus GN=LCC3-1 PE=1 SV=1 6 518 3.0E-149
sp|Q99056|LAC5_TRAVI Laccase-5 OS=Trametes villosa GN=LCC5 PE=3 SV=2 25 516 5.0E-149
sp|Q12717|LAC5_TRAVE Laccase-5 OS=Trametes versicolor GN=LCC5 PE=2 SV=1 25 516 2.0E-148
sp|D0VWU3|LAC1_TRAMX Laccase OS=Trametes maxima PE=1 SV=1 25 520 4.0E-147
sp|Q02081|LAC4_THACU Laccase-4 OS=Thanatephorus cucumeris GN=LCC4 PE=1 SV=1 9 502 4.0E-146
sp|Q99044|LAC1_TRAVI Laccase-1 OS=Trametes villosa GN=LCC1 PE=3 SV=1 25 520 6.0E-146
sp|Q02497|LAC1_TRAHI Laccase OS=Trametes hirsuta PE=1 SV=1 23 516 2.0E-142
sp|Q99049|LAC3_TRAVI Laccase-3 OS=Trametes villosa GN=LCC3 PE=3 SV=1 3 513 2.0E-135
sp|Q02079|LAC3_THACU Laccase-3 OS=Thanatephorus cucumeris GN=LCC3 PE=2 SV=1 1 519 3.0E-132
sp|P56193|LAC1_THACU Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1 1 513 9.0E-127
sp|Q02075|LAC2_THACU Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 1 288 1.0E-91
sp|P43561|FET5_YEAST Iron transport multicopper oxidase FET5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET5 PE=1 SV=1 6 509 1.0E-63
sp|P38993|FET3_YEAST Iron transport multicopper oxidase FET3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FET3 PE=1 SV=2 3 509 1.0E-61
sp|Q09920|FIO1_SCHPO Iron transport multicopper oxidase fio1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fio1 PE=3 SV=1 9 490 9.0E-61
sp|Q6CII3|FET3_KLULA Iron transport multicopper oxidase FET3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=FET3 PE=3 SV=1 3 501 2.0E-60
sp|Q96WM9|LAC2_BOTFU Laccase-2 OS=Botryotinia fuckeliana GN=lcc2 PE=2 SV=1 21 517 3.0E-60
sp|Q12570|LAC1_BOTFU Laccase-1 OS=Botryotinia fuckeliana GN=lcc1 PE=2 SV=3 30 488 1.0E-59
sp|P78591|FET3_CANAX Iron transport multicopper oxidase FET3 OS=Candida albicans GN=FET3 PE=3 SV=1 3 490 6.0E-57
sp|Q40588|ASO_TOBAC L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1 15 488 3.0E-56
sp|Q96WT3|FET3_CANGA Iron transport multicopper oxidase FET3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FET3 PE=3 SV=1 7 509 3.0E-56
sp|P78722|LAC2_PODAS Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1 21 495 2.0E-54
sp|P06811|LAC1_NEUCR Laccase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=lacc PE=1 SV=3 19 518 2.0E-52
sp|Q70KY3|LAC1_MELAO Laccase-1 OS=Melanocarpus albomyces GN=LAC1 PE=1 SV=1 21 517 2.0E-52
sp|Q03966|LAC1_CRYPA Laccase OS=Cryphonectria parasitica GN=LAC-1 PE=3 SV=1 22 518 5.0E-51
sp|Q96UM2|LAC3_BOTFU Laccase-3 (Fragment) OS=Botryotinia fuckeliana GN=lcc3 PE=3 SV=1 50 485 8.0E-51
sp|Q8RYM9|LAC2_ORYSJ Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1 20 502 3.0E-49
sp|Q0IQU1|LAC22_ORYSJ Laccase-22 OS=Oryza sativa subsp. japonica GN=LAC22 PE=2 SV=2 2 502 6.0E-46
sp|O80434|LAC4_ARATH Laccase-4 OS=Arabidopsis thaliana GN=IRX12 PE=2 SV=2 24 502 2.0E-45
sp|Q9LMS3|LAC1_ARATH Laccase-1 OS=Arabidopsis thaliana GN=LAC1 PE=2 SV=1 16 485 7.0E-44
sp|Q6ID18|LAC10_ARATH Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1 1 502 9.0E-44
sp|D4APX3|LAC1_ARTBC Laccase ARB_05828 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05828 PE=1 SV=1 21 491 4.0E-43
sp|Q9LYQ2|LAC13_ARATH Laccase-13 OS=Arabidopsis thaliana GN=LAC13 PE=2 SV=1 7 498 3.0E-42
sp|Q1PDH6|LAC16_ARATH Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2 7 502 5.0E-42
sp|Q56YT0|LAC3_ARATH Laccase-3 OS=Arabidopsis thaliana GN=LAC3 PE=2 SV=2 41 485 6.0E-42
sp|Q2QUN2|LAC24_ORYSJ Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1 39 485 9.0E-42
sp|Q84J37|LAC15_ARATH Laccase-15 OS=Arabidopsis thaliana GN=TT10 PE=1 SV=1 5 485 2.0E-40
sp|Q5N7B4|LAC7_ORYSJ Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1 19 502 1.0E-39
sp|Q9FY79|LAC14_ARATH Laccase-14 OS=Arabidopsis thaliana GN=LAC14 PE=2 SV=1 7 485 9.0E-39
sp|Q2QZ80|LAC21_ORYSJ Laccase-21 OS=Oryza sativa subsp. japonica GN=LAC21 PE=2 SV=1 3 503 1.0E-38
sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 22 300 2.0E-38
sp|Q5N9X2|LAC4_ORYSJ Laccase-4 OS=Oryza sativa subsp. japonica GN=LAC4 PE=2 SV=1 21 485 2.0E-38
sp|Q02075|LAC2_THACU Laccase-2 OS=Thanatephorus cucumeris GN=LCC2 PE=2 SV=1 363 520 1.0E-37
sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9 OS=Oryza sativa subsp. japonica GN=LAC9 PE=3 SV=1 1 503 1.0E-37
sp|Q0JHP8|LAC8_ORYSJ Laccase-8 OS=Oryza sativa subsp. japonica GN=LAC8 PE=3 SV=2 8 485 2.0E-37
sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 8 300 5.0E-37
sp|Q9ZPY2|LAC6_ARATH Laccase-6 OS=Arabidopsis thaliana GN=LAC6 PE=2 SV=1 7 485 9.0E-37
sp|Q0DHL5|LAC11_ORYSJ Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2 45 485 1.0E-36
sp|Q5ZCW1|LAC1_ORYSJ Putative laccase-1 OS=Oryza sativa subsp. japonica GN=LAC1 PE=3 SV=1 19 503 3.0E-36
sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 15 309 4.0E-36
sp|Q5N9W4|LAC5_ORYSJ Putative laccase-5 OS=Oryza sativa subsp. japonica GN=LAC5 PE=3 SV=1 14 485 5.0E-36
sp|O81081|LAC2_ARATH Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1 24 486 2.0E-35
sp|Q941X2|LAC3_ORYSJ Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1 41 485 2.0E-35
sp|Q69L99|LAC14_ORYSJ Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=3 SV=1 26 485 3.0E-35
sp|Q10ND7|LAC10_ORYSJ Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1 23 500 1.0E-34
sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 19 304 3.0E-34
sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=3 SV=1 45 313 6.0E-30
sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 25 312 2.0E-28
sp|A2Y9C5|LAC19_ORYSI Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1 44 312 3.0E-28
sp|Q9SR40|LAC7_ARATH Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1 1 312 3.0E-28
sp|Q2R0L0|LAC20_ORYSJ Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1 44 312 5.0E-28
sp|Q2R0L2|LAC19_ORYSJ Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1 44 312 7.0E-28
sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 6 311 3.0E-27
sp|Q9SU40|SKU5_ARATH Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana GN=SKU5 PE=1 SV=1 7 285 5.0E-27
sp|Q9FHN6|SKS2_ARATH Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1 23 518 6.0E-27
sp|Q5N7A3|LAC6_ORYSJ Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1 7 309 7.0E-27
sp|A2Y9C2|LAC20_ORYSI Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=3 SV=1 44 312 7.0E-27
sp|Q2RBK2|LAC17_ORYSJ Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 41 285 2.0E-26
sp|Q9LFD1|LAC9_ARATH Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 3 312 5.0E-26
sp|A2XCN6|LAC18_ORYSI Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1 44 312 6.0E-26
sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 8 285 4.0E-25
sp|Q2QYS3|LAC23_ORYSJ Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1 39 285 2.0E-24
sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 6 272 2.0E-24
sp|Q7XE50|LAC16_ORYSJ Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1 82 503 3.0E-24
sp|Q53LU4|LAC18_ORYSJ Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 44 312 5.0E-24
sp|Q9LFD2|LAC8_ARATH Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1 3 312 1.0E-23
sp|Q04399|GMC1_YEAST Putative multicopper oxidase GMC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GMC1 PE=1 SV=1 39 489 1.0E-23
sp|Q8VXX5|SKS1_ARATH Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1 3 518 1.0E-23
sp|I6WZK7|MMCO_MYCTU Multicopper oxidase MmcO OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mmcO PE=1 SV=1 42 482 5.0E-21
sp|Q339K6|LAC15_ORYSJ Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 39 293 4.0E-20
sp|Q47452|PCOA_ECOLX Copper resistance protein A OS=Escherichia coli GN=pcoA PE=3 SV=1 5 273 2.0E-18
sp|Q00624|ASOL_BRANA L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1 34 313 2.0E-15
sp|P12374|COPA_PSEUB Copper resistance protein A OS=Pseudomonas syringae pv. tomato GN=copA PE=1 SV=1 16 272 2.0E-14
sp|P29162|ASOL_TOBAC L-ascorbate oxidase homolog OS=Nicotiana tabacum PE=2 SV=1 7 283 3.0E-14
sp|P17489|LAC1_EMENI Laccase-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=yA PE=2 SV=3 37 199 5.0E-14
sp|P59571|COPA_PSESM Copper resistance protein A homolog OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=copA PE=3 SV=1 24 272 2.0E-13
sp|P24792|ASO_CUCMA L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2 417 490 5.0E-13
sp|P37064|ASO_CUCPM L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1 416 490 6.0E-13
sp|Q5N7A3|LAC6_ORYSJ Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1 394 485 2.0E-12
sp|Q2QYS3|LAC23_ORYSJ Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=3 SV=1 393 509 5.0E-12
sp|P14133|ASO_CUCSA L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1 417 488 6.0E-12
sp|Q8VZA1|LAC11_ARATH Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1 406 496 3.0E-11
sp|Q2RBK2|LAC17_ORYSJ Putative laccase-17 OS=Oryza sativa subsp. japonica GN=LAC17 PE=3 SV=1 397 509 4.0E-11
sp|Q339K6|LAC15_ORYSJ Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1 416 485 9.0E-11
sp|Q9FLB5|LAC12_ARATH Laccase-12 OS=Arabidopsis thaliana GN=LAC12 PE=2 SV=1 406 485 1.0E-10
sp|Q9SIY8|LAC5_ARATH Laccase-5 OS=Arabidopsis thaliana GN=LAC5 PE=2 SV=1 417 485 4.0E-10
sp|Q0IP28|LAC25_ORYSJ Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=3 SV=1 380 500 6.0E-10
sp|Q0DHL2|LAC12_ORYSJ Laccase-12/13 OS=Oryza sativa subsp. japonica GN=LAC12 PE=2 SV=1 360 485 6.0E-10
sp|Q9FJD5|LAC17_ARATH Laccase-17 OS=Arabidopsis thaliana GN=LAC17 PE=2 SV=1 398 485 6.0E-10
sp|Q8Z9E1|CUEO_SALTI Blue copper oxidase CueO OS=Salmonella typhi GN=cueO PE=3 SV=1 46 272 3.0E-09
sp|Q8ZRS2|CUEO_SALTY Blue copper oxidase CueO OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=cueO PE=3 SV=1 46 272 4.0E-09
sp|Q9SR40|LAC7_ARATH Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1 416 485 6.0E-09
sp|A2XCN6|LAC18_ORYSI Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1 416 485 6.0E-09
sp|A2Y9C5|LAC19_ORYSI Putative laccase-19 OS=Oryza sativa subsp. indica GN=LAC19 PE=3 SV=1 416 485 2.0E-08
sp|Q2R0L2|LAC19_ORYSJ Laccase-19 OS=Oryza sativa subsp. japonica GN=LAC19 PE=2 SV=1 416 485 2.0E-08
sp|Q53LU4|LAC18_ORYSJ Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1 416 485 2.0E-08
sp|Q2R0L0|LAC20_ORYSJ Laccase-20 OS=Oryza sativa subsp. japonica GN=LAC20 PE=2 SV=1 416 485 4.0E-08
sp|A2Y9C2|LAC20_ORYSI Laccase-20 OS=Oryza sativa subsp. indica GN=LAC20 PE=3 SV=1 416 485 4.0E-08
sp|P36649|CUEO_ECOLI Blue copper oxidase CueO OS=Escherichia coli (strain K12) GN=cueO PE=1 SV=2 46 279 1.0E-07
sp|Q8X947|CUEO_ECO57 Blue copper oxidase CueO OS=Escherichia coli O157:H7 GN=cueO PE=3 SV=1 46 279 1.0E-07
sp|Q9LFD1|LAC9_ARATH Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1 404 485 2.0E-07
sp|Q9LFD2|LAC8_ARATH Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1 389 500 4.0E-07
sp|Q69HT9|MCO_STAAU Multicopper oxidase mco OS=Staphylococcus aureus GN=mco PE=1 SV=2 41 148 5.0E-07
sp|Q6GIX3|MCO_STAAR Multicopper oxidase mco OS=Staphylococcus aureus (strain MRSA252) GN=mco PE=3 SV=2 41 148 5.0E-07
sp|Q8CQF6|MCO_STAES Multicopper oxidase mco OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mco PE=3 SV=2 41 148 6.0E-07
sp|Q4LAB0|MCO_STAHJ Multicopper oxidase mco OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mco PE=3 SV=2 41 148 7.0E-07
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GO

GO Term Description Terminal node
GO:0005507 copper ion binding Yes
GO:0016491 oxidoreductase activity Yes
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0003824 catalytic activity No
GO:0046914 transition metal ion binding No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 58.27 32.72 83.83
Initials Initials knots 18.85 10.34 27.36
Pileal_Stipeal_center Stage I stipe center 13.52 7.09 19.95
Pileal_Stipeal_shell Stage I stipe shell 9.60 4.82 14.38
DIF_stipe_center Stage II stipe center 14.10 7.43 20.77
DIF_stipe_shell Stage II stipe shell 12.36 6.35 18.37
DIF_stipe_skin Stage II stipe skin 10.94 5.57 16.30
DIF_cap_skin Stage II cap skin 7.55 3.65 11.46
DIF_cap_tissue Stage II cap tissue 8.59 4.25 12.94
DIF_gill_tissue Stage II gill tissue 10.26 5.20 15.33
YFB_stipe_center Young fruiting body stipe center 11.93 6.14 17.72
YFB_stipe_shell Young fruiting body stipe shell 11.87 6.13 17.61
YFB_stipe_skin Young fruiting body stipe skin 11.08 5.67 16.50
YFB_cap_skin Young fruiting body cap skin 9.65 4.83 14.47
YFB_cap_tissue Young fruiting body cap tissue 7.99 3.83 12.14
YFB_gill_tissue Young fruiting body gill tissue 9.41 4.68 14.14
YFB_veil Young fruiting body veil 11.36 5.81 16.90

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.000613 yes
Casing YFB_stipe_center 0.000613 yes
Casing YFB_stipe_shell 0.000613 yes
Casing YFB_stipe_skin 0.000613 yes
Casing YFB_cap_skin 0.000613 yes
Casing YFB_cap_tissue 0.000613 yes
Casing YFB_gill_tissue 0.000613 yes
Casing YFB_veil 0.000613 yes
Casing Initials 0.000613 yes
Casing Pileal_Stipeal_center 0.000613 yes
Casing Pileal_Stipeal_shell 0.000613 yes
Casing DIF_stipe_center 0.000613 yes
Casing DIF_stipe_shell 0.000613 yes
Casing DIF_stipe_skin 0.000613 yes
Casing DIF_cap_skin 0.000613 yes
Casing DIF_cap_tissue 0.000613 yes
DIF_gill_tissue YFB_stipe_center 0.770908 no
DIF_gill_tissue YFB_stipe_shell 0.784425 no
DIF_gill_tissue YFB_stipe_skin 0.901124 no
DIF_gill_tissue YFB_cap_skin 0.924300 no
DIF_gill_tissue YFB_cap_tissue 0.589671 no
DIF_gill_tissue YFB_gill_tissue 0.886172 no
DIF_gill_tissue YFB_veil 0.862180 no
YFB_stipe_center YFB_stipe_shell 0.993411 no
YFB_stipe_center YFB_stipe_skin 0.908153 no
YFB_stipe_center YFB_cap_skin 0.664948 no
YFB_stipe_center YFB_cap_tissue 0.317334 no
YFB_stipe_center YFB_gill_tissue 0.612734 no
YFB_stipe_center YFB_veil 0.940814 no
YFB_stipe_shell YFB_stipe_skin 0.914835 no
YFB_stipe_shell YFB_cap_skin 0.677959 no
YFB_stipe_shell YFB_cap_tissue 0.328438 no
YFB_stipe_shell YFB_gill_tissue 0.624754 no
YFB_stipe_shell YFB_veil 0.947412 no
YFB_stipe_skin YFB_cap_skin 0.805885 no
YFB_stipe_skin YFB_cap_tissue 0.447336 no
YFB_stipe_skin YFB_gill_tissue 0.758620 no
YFB_stipe_skin YFB_veil 0.971104 no
YFB_cap_skin YFB_cap_tissue 0.723179 no
YFB_cap_skin YFB_gill_tissue 0.969929 no
YFB_cap_skin YFB_veil 0.757992 no
YFB_cap_tissue YFB_gill_tissue 0.766213 no
YFB_cap_tissue YFB_veil 0.398990 no
YFB_gill_tissue YFB_veil 0.708234 no
Initials DIF_gill_tissue 0.051723 no
Initials YFB_stipe_center 0.179208 no
Initials YFB_stipe_shell 0.171000 no
Initials YFB_stipe_skin 0.101542 no
Initials YFB_cap_skin 0.033211 yes
Initials YFB_cap_tissue 0.009123 yes
Initials YFB_gill_tissue 0.021846 yes
Initials YFB_veil 0.125578 no
Initials Pileal_Stipeal_center 0.370828 no
Initials Pileal_Stipeal_shell 0.032266 yes
Initials DIF_stipe_center 0.453578 no
Initials DIF_stipe_shell 0.233752 no
Initials DIF_stipe_skin 0.092841 no
Initials DIF_cap_skin 0.004160 yes
Initials DIF_cap_tissue 0.008121 yes
Pileal_Stipeal_center DIF_gill_tissue 0.505554 no
Pileal_Stipeal_center YFB_stipe_center 0.814718 no
Pileal_Stipeal_center YFB_stipe_shell 0.807638 no
Pileal_Stipeal_center YFB_stipe_skin 0.679638 no
Pileal_Stipeal_center YFB_cap_skin 0.389457 no
Pileal_Stipeal_center YFB_cap_tissue 0.140982 no
Pileal_Stipeal_center YFB_gill_tissue 0.343010 no
Pileal_Stipeal_center YFB_veil 0.722891 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.377028 no
Pileal_Stipeal_center DIF_stipe_center 0.946597 no
Pileal_Stipeal_center DIF_stipe_shell 0.878836 no
Pileal_Stipeal_center DIF_stipe_skin 0.647629 no
Pileal_Stipeal_center DIF_cap_skin 0.085220 no
Pileal_Stipeal_center DIF_cap_tissue 0.201976 no
Pileal_Stipeal_shell DIF_gill_tissue 0.918570 no
Pileal_Stipeal_shell YFB_stipe_center 0.646036 no
Pileal_Stipeal_shell YFB_stipe_shell 0.662206 no
Pileal_Stipeal_shell YFB_stipe_skin 0.795052 no
Pileal_Stipeal_shell YFB_cap_skin 0.993348 no
Pileal_Stipeal_shell YFB_cap_tissue 0.732259 no
Pileal_Stipeal_shell YFB_gill_tissue 0.976772 no
Pileal_Stipeal_shell YFB_veil 0.746576 no
Pileal_Stipeal_shell DIF_stipe_center 0.311935 no
Pileal_Stipeal_shell DIF_stipe_shell 0.585596 no
Pileal_Stipeal_shell DIF_stipe_skin 0.818001 no
Pileal_Stipeal_shell DIF_cap_skin 0.621873 no
Pileal_Stipeal_shell DIF_cap_tissue 0.852370 no
DIF_stipe_center DIF_gill_tissue 0.429531 no
DIF_stipe_center YFB_stipe_center 0.737450 no
DIF_stipe_center YFB_stipe_shell 0.731165 no
DIF_stipe_center YFB_stipe_skin 0.594282 no
DIF_stipe_center YFB_cap_skin 0.324874 no
DIF_stipe_center YFB_cap_tissue 0.107290 no
DIF_stipe_center YFB_gill_tissue 0.275058 no
DIF_stipe_center YFB_veil 0.639534 no
DIF_stipe_center DIF_stipe_shell 0.808392 no
DIF_stipe_center DIF_stipe_skin 0.564154 no
DIF_stipe_center DIF_cap_skin 0.064333 no
DIF_stipe_center DIF_cap_tissue 0.152872 no
DIF_stipe_shell DIF_gill_tissue 0.710485 no
DIF_stipe_shell YFB_stipe_center 0.955945 no
DIF_stipe_shell YFB_stipe_shell 0.949606 no
DIF_stipe_shell YFB_stipe_skin 0.852290 no
DIF_stipe_shell YFB_cap_skin 0.594282 no
DIF_stipe_shell YFB_cap_tissue 0.268771 no
DIF_stipe_shell YFB_gill_tissue 0.542506 no
DIF_stipe_shell YFB_veil 0.889398 no
DIF_stipe_shell DIF_stipe_skin 0.828864 no
DIF_stipe_shell DIF_cap_skin 0.181569 no
DIF_stipe_shell DIF_cap_tissue 0.362644 no
DIF_stipe_skin DIF_gill_tissue 0.922691 no
DIF_stipe_skin YFB_stipe_center 0.885633 no
DIF_stipe_skin YFB_stipe_shell 0.895120 no
DIF_stipe_skin YFB_stipe_skin 0.984268 no
DIF_stipe_skin YFB_cap_skin 0.828166 no
DIF_stipe_skin YFB_cap_tissue 0.469431 no
DIF_stipe_skin YFB_gill_tissue 0.778374 no
DIF_stipe_skin YFB_veil 0.955945 no
DIF_stipe_skin DIF_cap_skin 0.364751 no
DIF_stipe_skin DIF_cap_tissue 0.599644 no
DIF_cap_skin DIF_gill_tissue 0.481823 no
DIF_cap_skin YFB_stipe_center 0.226043 no
DIF_cap_skin YFB_stipe_shell 0.232094 no
DIF_cap_skin YFB_stipe_skin 0.344928 no
DIF_cap_skin YFB_cap_skin 0.608145 no
DIF_cap_skin YFB_cap_tissue 0.937550 no
DIF_cap_skin YFB_gill_tissue 0.657845 no
DIF_cap_skin YFB_veil 0.297484 no
DIF_cap_skin DIF_cap_tissue 0.825440 no
DIF_cap_tissue DIF_gill_tissue 0.728588 no
DIF_cap_tissue YFB_stipe_center 0.419996 no
DIF_cap_tissue YFB_stipe_shell 0.439011 no
DIF_cap_tissue YFB_stipe_skin 0.582750 no
DIF_cap_tissue YFB_cap_skin 0.844757 no
DIF_cap_tissue YFB_cap_tissue 0.913164 no
DIF_cap_tissue YFB_gill_tissue 0.881795 no
DIF_cap_tissue YFB_veil 0.526760 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|022190
MRLSNAFVLVAACISSVLADTKTFDFDLVNTRLAPDGFERDTVVINGEFPGTLIQVNKGDSVRIPLHNKLTSPTM
RRSVSIHWHGFFQARTSGQDGPSFVNQCPQPPNTTFTYEFSVAEQSGTYWYHSHLSTQYCDGLRGAFIVYDPRDP
LRHLYDVDDESTVITLAEWYHILAPDATNEFFSSGIIPVQDSGLINGKGRFNGGPLTPFAVVNVRRGKRYRLRVI
AISCRPFFTFSVDNHSLVFMEADGVEHDPVEVQNVDIYAAQRVSVILHANQPIDNYWIRAPMTGGNPDRNPNLNI
SLTLAILRYHGARHVEPTTVNVPGHKLLDQEMHPIRQEGPGKLGDGPPDKHITLNIAQPNAPFFDINGISYISPT
VPVLLQILSGAKRPEDVLPSEQIFFVPKNSLIEVNIPGEGAHPFHLHGHNFDVVLASNDDTFNFKNPPRRDVYPI
NGGNTTFRFFTDNPGAWFLHCHIDWHLEAGLAIVFAEAPEDNVSGPQSQITPQDWLDLCPEYNAIEPEFQ*
Coding >AgabiH97|022190
ATGAGGCTGTCCAACGCTTTTGTATTGGTTGCCGCATGCATTTCGAGCGTACTCGCCGATACCAAAACATTCGAC
TTCGACCTAGTCAATACCAGGCTCGCGCCTGACGGGTTTGAAAGGGACACCGTGGTCATCAATGGAGAATTCCCT
GGAACACTGATCCAAGTCAACAAGGGCGACAGTGTCCGCATCCCTCTCCATAACAAACTGACTAGCCCGACCATG
AGGCGAAGTGTATCCATTCATTGGCATGGATTCTTCCAAGCGAGGACTTCTGGTCAGGACGGGCCTTCCTTCGTG
AATCAGTGCCCTCAGCCACCCAACACAACCTTCACCTATGAATTCAGCGTCGCGGAGCAATCTGGAACTTATTGG
TACCATTCACACTTGTCCACCCAATACTGTGATGGTCTTCGCGGTGCATTCATCGTTTACGACCCACGTGATCCA
CTCAGACATCTCTATGATGTTGATGACGAAAGTACCGTCATCACTCTAGCTGAATGGTATCACATCCTCGCACCC
GATGCCACTAACGAGTTTTTCAGCTCTGGCATTATACCCGTACAAGATTCTGGCTTGATCAACGGGAAAGGTAGA
TTCAATGGAGGACCCCTCACACCATTCGCCGTCGTCAATGTTCGACGAGGCAAACGTTACAGGCTCCGTGTCATA
GCTATTTCTTGCAGGCCGTTCTTCACCTTCTCCGTCGATAACCATAGCTTGGTCTTCATGGAAGCCGATGGTGTT
GAACATGACCCTGTCGAAGTCCAAAACGTCGACATCTACGCGGCCCAGCGTGTCTCGGTTATTCTGCATGCCAAT
CAACCCATCGATAACTACTGGATCAGAGCTCCTATGACTGGCGGCAACCCAGACAGGAACCCCAATCTAAACATC
AGCCTCACTCTCGCCATCCTGCGCTACCATGGTGCACGTCACGTCGAACCGACTACGGTCAACGTTCCCGGACAC
AAACTCCTTGATCAAGAAATGCATCCGATCCGCCAGGAAGGACCAGGCAAACTCGGTGACGGTCCCCCCGATAAG
CACATCACCCTCAACATTGCTCAACCCAACGCTCCCTTCTTCGATATCAACGGAATCTCTTACATTTCCCCGACT
GTCCCTGTTCTTCTCCAAATCCTCAGCGGTGCCAAGAGGCCCGAAGATGTTCTTCCATCCGAGCAAATCTTCTTT
GTCCCCAAGAACTCGTTGATTGAAGTCAACATTCCAGGAGAAGGAGCTCATCCATTCCATTTGCACGGTCATAAC
TTTGATGTCGTTCTGGCTTCTAACGACGACACTTTCAACTTCAAGAACCCGCCTCGTCGTGACGTATACCCCATC
AATGGTGGCAACACCACTTTCCGCTTCTTCACCGATAACCCAGGCGCATGGTTCTTGCATTGCCATATCGATTGG
CATCTTGAAGCTGGTCTCGCTATTGTGTTTGCTGAGGCTCCGGAGGATAACGTTTCAGGTCCCCAGTCTCAGATC
ACTCCTCAAGATTGGTTGGATCTCTGTCCAGAATACAACGCAATCGAGCCTGAATTCCAGTAG
Transcript >AgabiH97|022190
ATGAGGCTGTCCAACGCTTTTGTATTGGTTGCCGCATGCATTTCGAGCGTACTCGCCGATACCAAAACATTCGAC
TTCGACCTAGTCAATACCAGGCTCGCGCCTGACGGGTTTGAAAGGGACACCGTGGTCATCAATGGAGAATTCCCT
GGAACACTGATCCAAGTCAACAAGGGCGACAGTGTCCGCATCCCTCTCCATAACAAACTGACTAGCCCGACCATG
AGGCGAAGTGTATCCATTCATTGGCATGGATTCTTCCAAGCGAGGACTTCTGGTCAGGACGGGCCTTCCTTCGTG
AATCAGTGCCCTCAGCCACCCAACACAACCTTCACCTATGAATTCAGCGTCGCGGAGCAATCTGGAACTTATTGG
TACCATTCACACTTGTCCACCCAATACTGTGATGGTCTTCGCGGTGCATTCATCGTTTACGACCCACGTGATCCA
CTCAGACATCTCTATGATGTTGATGACGAAAGTACCGTCATCACTCTAGCTGAATGGTATCACATCCTCGCACCC
GATGCCACTAACGAGTTTTTCAGCTCTGGCATTATACCCGTACAAGATTCTGGCTTGATCAACGGGAAAGGTAGA
TTCAATGGAGGACCCCTCACACCATTCGCCGTCGTCAATGTTCGACGAGGCAAACGTTACAGGCTCCGTGTCATA
GCTATTTCTTGCAGGCCGTTCTTCACCTTCTCCGTCGATAACCATAGCTTGGTCTTCATGGAAGCCGATGGTGTT
GAACATGACCCTGTCGAAGTCCAAAACGTCGACATCTACGCGGCCCAGCGTGTCTCGGTTATTCTGCATGCCAAT
CAACCCATCGATAACTACTGGATCAGAGCTCCTATGACTGGCGGCAACCCAGACAGGAACCCCAATCTAAACATC
AGCCTCACTCTCGCCATCCTGCGCTACCATGGTGCACGTCACGTCGAACCGACTACGGTCAACGTTCCCGGACAC
AAACTCCTTGATCAAGAAATGCATCCGATCCGCCAGGAAGGACCAGGCAAACTCGGTGACGGTCCCCCCGATAAG
CACATCACCCTCAACATTGCTCAACCCAACGCTCCCTTCTTCGATATCAACGGAATCTCTTACATTTCCCCGACT
GTCCCTGTTCTTCTCCAAATCCTCAGCGGTGCCAAGAGGCCCGAAGATGTTCTTCCATCCGAGCAAATCTTCTTT
GTCCCCAAGAACTCGTTGATTGAAGTCAACATTCCAGGAGAAGGAGCTCATCCATTCCATTTGCACGGTCATAAC
TTTGATGTCGTTCTGGCTTCTAACGACGACACTTTCAACTTCAAGAACCCGCCTCGTCGTGACGTATACCCCATC
AATGGTGGCAACACCACTTTCCGCTTCTTCACCGATAACCCAGGCGCATGGTTCTTGCATTGCCATATCGATTGG
CATCTTGAAGCTGGTCTCGCTATTGTGTTTGCTGAGGCTCCGGAGGATAACGTTTCAGGTCCCCAGTCTCAGATC
ACTCCTCAAGATTGGTTGGATCTCTGTCCAGAATACAACGCAATCGAGCCTGAATTCCAGTAG
Gene >AgabiH97|022190
ATGAGGCTGTCCAACGCTTTTGTATTGGTTGCCGCATGCATTTCGAGCGTACTCGCCGATACCAAAACATTCGAC
TTCGACCTAGTCAATACCAGGCTCGCGCCTGACGGGTTTGAAAGGGAGTGAGTATATTTCTATACAGATTCATCG
TTAGAGTTTACTGACCTTGATTCAAACTAGCACCGTGGTCATCAATGGAGAATTCCCTGGAACACTGATCCAAGT
CAACAAGGGCGACAGTGTCCGCATCCCTCTCCATAACAAACTGACTAGCCCGACCATGAGGCGAAGTGTATCCAT
TGTGAGTTACTTTTTGAGACCAAATTGACTTGACTATCTAACACAAATTAGCATTGGCATGGATTCTTCCAAGCG
AGGACTTCTGGTCAGGACGGGCCTTCCTTCGTGAATCAGTGCCCTCAGCCACCCAACACAACCTTCACCTATGAA
TTCAGCGTCGCGGAGCAATCTGGAACGTTCGTCCTGATCCACAAAATCATTTTCAGCATAAATTGACATTTCTTC
AAGTTATTGGTACCATTCACACTTGTCCACCCAATACTGTGATGGTCTTCGCGGTGCATTCATCGTTTACGGTAA
TTCTTTCCTCTTACATGCGAAGATATTTTTGCCGACTTTGTTTAGACCCACGTGATCCACTCAGACATCTCTATG
ATGTTGATGACGAAAGTACCGTCATCACTCTAGCTGAATGGTATCACATCCTCGCACCCGATGCCACTAACGAGT
TTTTCAGCTCTGGCATTATACCGTAAGCTTCTTAAAGGAATATTTATTCATTTCATAATCCATTTCCTGCAGCGT
ACAAGATTCTGGCTTGATCAACGGGAAAGGTAGATTCAATGGAGGACCCCTCAGTAAGTCGATCAAAACAGAAAA
GGTGACGATGAAAATTTGACTTTACTTGCTTAGCACCATTCGCCGTCGTCAATGTTCGACGAGGCAAACGTTACA
GGCTCCGTGTCATAGCTATTTCTTGCAGGCCGTTCTTCACCTTCTCCGTCGATAACCATAGCTTGGTCTTCATGG
AAGCCGATGGTGTTGAACATGACCCTGTCGAAGTCCAAAACGTCGACATCTACGCGGCCCAGCGTGTCTCGGTTA
TTCTGCATGCCAATCAACCCATCGATAACTACTGGATCAGAGCTCCTATGACTGGCGGCAACCCAGACAGGAACC
CCAATCGTAAGCGTCATTTTGCCACCTGCTAGCAGCTGTAATGAAACGTGTTTCCAAAGTAAACATCAGCCTCAC
TCTCGCCATCCTGCGCTACCATGGTGCACGTCACGTCGAACCGACTACGGTCAACGTTCCCGGACACAAACTCCT
TGATCAAGAAATGCATGTAAGAATAACTTGCGCAAAGGCATTCCGAAATGCTTACTAACGCACACCGATCTAGCC
GATCCGCCAGGAAGGACCAGGCAAAGTGTGTATATATTTACATGAACATAATCATCAACTCAACGTTCTCTAGCT
CGGTGACGGTCCCCCCGATAAGCACATCACCCTCAACATTGCTCAAGTAAGCGTCTCATTATTCAAATCAAACTC
GACTTCTGACATGAGCACAGCCCAACGCTCCCTTCTTCGATATCAACGGAATCTCTTACATTTCCCCGACTGTCC
CTGTTCTTCTCCAAATCCTCAGCGGTGCCAAGAGGCCCGAAGATGTTCTTCCATCCGAGCAAATCTTCTTTGTCC
CCAAGAACTCGTTGATTGAAGTCAACATTCCAGGAGAAGGAGCTCATCCATTCCATTGTATGGTAACCTCATTTT
CTCCTCAATTCCTCTACTTACGTCCCTGTTTCAGTGCACGGTCATAACTTTGATGTCGTTCTGGCTTCTAACGAC
GACACTTTCAACTTCAAGAAGTGAGTTAATTGAAAAAGGAAGTTACCTGCTGAACACTAATCTCAAATGAAAGCC
CGCCTCGTCGTGACGTATACCCCATCAATGGTGGCAACACCACTTTCCGCTTCTGTAAGATTCCACGTTGCTTTC
TGAAGAATAACTCTTTCTGAACGACCCCTCAGTCACCGATAACCCAGGCGCATGGTTCTTGCATTGGTGAGGAAC
ATTTCTATCCATTTCTCTCGAGGCGAATACTGATTGAATCTTGTGACATAGCCATATCGATTGGCATCTTGAAGC
TGGTCTCGCTATTGTGTTTGCTGAGGCTCCGGAGGATAACGTTTCAGGTCCCCAGTCTCAGATCACTCCTCAAGA
TTGGTTGGATCTCTGTCCAGAATACAACGCAATCGAGCCTGAATTCCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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