Fungal Genomics

General Properties

Protein ID	AgabiH97|022110
Gene name
Location	scaffold_11:162467..164302
Strand	+
Gene length (bp)	1835
Transcript length (bp)	1068
Coding sequence length (bp)	1068
Protein length (aa)	356

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11895	Peroxidase_ext	Fungal peroxidase extension region	4.0E-27	279	354
PF00141	peroxidase	Peroxidase	4.8E-25	65	276

Swissprot hits

GO

GO Term	Description	Terminal node
GO:0020037	heme binding	Yes
GO:0004601	peroxidase activity	Yes
GO:0006979	response to oxidative stress	Yes
GO:0003674	molecular_function	No
GO:0046906	tetrapyrrole binding	No
GO:0005488	binding	No
GO:0006950	response to stress	No
GO:0097159	organic cyclic compound binding	No
GO:0016491	oxidoreductase activity	No
GO:0016209	antioxidant activity	No
GO:1901363	heterocyclic compound binding	No
GO:0003824	catalytic activity	No
GO:0050896	response to stimulus	No
GO:0008150	biological_process	No
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	No

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.123	0.0483	0.9707	0.1097	0.0535	0.0687	0.2418	0.1782	0.2017	0.003

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 21	0.999617

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
AA2	6.1E-101	45	297

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
Casing	Casing mycelium	5.69	2.47	8.91
Initials	Initials knots	7.93	3.63	12.23
Pileal_Stipeal_center	Stage I stipe center	9.29	4.30	14.29
Pileal_Stipeal_shell	Stage I stipe shell	7.41	3.33	11.50
DIF_stipe_center	Stage II stipe center	8.77	3.98	13.55
DIF_stipe_shell	Stage II stipe shell	10.61	5.04	16.18
DIF_stipe_skin	Stage II stipe skin	6.71	2.97	10.46
DIF_cap_skin	Stage II cap skin	4.75	2.00	7.50
DIF_cap_tissue	Stage II cap tissue	6.08	2.62	9.54
DIF_gill_tissue	Stage II gill tissue	7.78	3.55	12.01
YFB_stipe_center	Young fruiting body stipe center	4.23	1.69	6.77
YFB_stipe_shell	Young fruiting body stipe shell	5.15	2.17	8.13
YFB_stipe_skin	Young fruiting body stipe skin	5.29	2.25	8.34
YFB_cap_skin	Young fruiting body cap skin	4.23	1.71	6.75
YFB_cap_tissue	Young fruiting body cap tissue	5.42	2.29	8.55
YFB_gill_tissue	Young fruiting body gill tissue	5.72	2.49	8.95
YFB_veil	Young fruiting body veil	6.41	2.77	10.05

Differential expression

Label1	Label2	Q-value	Significant difference
Casing	DIF_gill_tissue	0.533464	no
Casing	YFB_stipe_center	0.589671	no
Casing	YFB_stipe_shell	0.886602	no
Casing	YFB_stipe_skin	0.922207	no
Casing	YFB_cap_skin	0.583465	no
Casing	YFB_cap_tissue	0.950083	no
Casing	YFB_gill_tissue	0.994016	no
Casing	YFB_veil	0.865180	no
Casing	Initials	0.503895	no
Casing	Pileal_Stipeal_center	0.242880	no
Casing	Pileal_Stipeal_shell	0.617316	no
Casing	DIF_stipe_center	0.332446	no
Casing	DIF_stipe_shell	0.108390	no
Casing	DIF_stipe_skin	0.789034	no
Casing	DIF_cap_skin	0.767934	no
Casing	DIF_cap_tissue	0.928762	no
DIF_gill_tissue	YFB_stipe_center	0.148790	no
DIF_gill_tissue	YFB_stipe_shell	0.351576	no
DIF_gill_tissue	YFB_stipe_skin	0.398838	no
DIF_gill_tissue	YFB_cap_skin	0.137864	no
DIF_gill_tissue	YFB_cap_tissue	0.442195	no
DIF_gill_tissue	YFB_gill_tissue	0.537055	no
DIF_gill_tissue	YFB_veil	0.740521	no
YFB_stipe_center	YFB_stipe_shell	0.754100	no
YFB_stipe_center	YFB_stipe_skin	0.709428	no
YFB_stipe_center	YFB_cap_skin	0.997074	no
YFB_stipe_center	YFB_cap_tissue	0.670446	no
YFB_stipe_center	YFB_gill_tissue	0.577213	no
YFB_stipe_center	YFB_veil	0.391570	no
YFB_stipe_shell	YFB_stipe_skin	0.972398	no
YFB_stipe_shell	YFB_cap_skin	0.745116	no
YFB_stipe_shell	YFB_cap_tissue	0.945603	no
YFB_stipe_shell	YFB_gill_tissue	0.880166	no
YFB_stipe_shell	YFB_veil	0.703809	no
YFB_stipe_skin	YFB_cap_skin	0.704900	no
YFB_stipe_skin	YFB_cap_tissue	0.974287	no
YFB_stipe_skin	YFB_gill_tissue	0.913662	no
YFB_stipe_skin	YFB_veil	0.753992	no
YFB_cap_skin	YFB_cap_tissue	0.663620	no
YFB_cap_skin	YFB_gill_tissue	0.575213	no
YFB_cap_skin	YFB_veil	0.387125	no
YFB_cap_tissue	YFB_gill_tissue	0.943101	no
YFB_cap_tissue	YFB_veil	0.792561	no
YFB_gill_tissue	YFB_veil	0.869723	no
Initials	DIF_gill_tissue	0.978718	no
Initials	YFB_stipe_center	0.130677	no
Initials	YFB_stipe_shell	0.323331	no
Initials	YFB_stipe_skin	0.370584	no
Initials	YFB_cap_skin	0.119156	no
Initials	YFB_cap_tissue	0.412815	no
Initials	YFB_gill_tissue	0.507128	no
Initials	YFB_veil	0.709873	no
Initials	Pileal_Stipeal_center	0.790108	no
Initials	Pileal_Stipeal_shell	0.925332	no
Initials	DIF_stipe_center	0.880981	no
Initials	DIF_stipe_shell	0.538402	no
Initials	DIF_stipe_skin	0.777054	no
Initials	DIF_cap_skin	0.218082	no
Initials	DIF_cap_tissue	0.613003	no
Pileal_Stipeal_center	DIF_gill_tissue	0.763896	no
Pileal_Stipeal_center	YFB_stipe_center	0.044418	yes
Pileal_Stipeal_center	YFB_stipe_shell	0.136602	no
Pileal_Stipeal_center	YFB_stipe_skin	0.168680	no
Pileal_Stipeal_center	YFB_cap_skin	0.039836	yes
Pileal_Stipeal_center	YFB_cap_tissue	0.188282	no
Pileal_Stipeal_center	YFB_gill_tissue	0.255267	no
Pileal_Stipeal_center	YFB_veil	0.423390	no
Pileal_Stipeal_center	Pileal_Stipeal_shell	0.674375	no
Pileal_Stipeal_center	DIF_stipe_center	0.936643	no
Pileal_Stipeal_center	DIF_stipe_shell	0.831290	no
Pileal_Stipeal_center	DIF_stipe_skin	0.480000	no
Pileal_Stipeal_center	DIF_cap_skin	0.083158	no
Pileal_Stipeal_center	DIF_cap_tissue	0.333265	no
Pileal_Stipeal_shell	DIF_gill_tissue	0.947685	no
Pileal_Stipeal_shell	YFB_stipe_center	0.187561	no
Pileal_Stipeal_shell	YFB_stipe_shell	0.434863	no
Pileal_Stipeal_shell	YFB_stipe_skin	0.484215	no
Pileal_Stipeal_shell	YFB_cap_skin	0.178332	no
Pileal_Stipeal_shell	YFB_cap_tissue	0.523681	no
Pileal_Stipeal_shell	YFB_gill_tissue	0.624602	no
Pileal_Stipeal_shell	YFB_veil	0.819569	no
Pileal_Stipeal_shell	DIF_stipe_center	0.779535	no
Pileal_Stipeal_shell	DIF_stipe_shell	0.409616	no
Pileal_Stipeal_shell	DIF_stipe_skin	0.878385	no
Pileal_Stipeal_shell	DIF_cap_skin	0.300025	no
Pileal_Stipeal_shell	DIF_cap_tissue	0.731165	no
DIF_stipe_center	DIF_gill_tissue	0.856739	no
DIF_stipe_center	YFB_stipe_center	0.065833	no
DIF_stipe_center	YFB_stipe_shell	0.189283	no
DIF_stipe_center	YFB_stipe_skin	0.228037	no
DIF_stipe_center	YFB_cap_skin	0.059712	no
DIF_stipe_center	YFB_cap_tissue	0.249412	no
DIF_stipe_center	YFB_gill_tissue	0.333894	no
DIF_stipe_center	YFB_veil	0.523001	no
DIF_stipe_center	DIF_stipe_shell	0.730163	no
DIF_stipe_center	DIF_stipe_skin	0.591830	no
DIF_stipe_center	DIF_cap_skin	0.118854	no
DIF_stipe_center	DIF_cap_tissue	0.427784	no
DIF_stipe_shell	DIF_gill_tissue	0.506577	no
DIF_stipe_shell	YFB_stipe_center	0.013186	yes
DIF_stipe_shell	YFB_stipe_shell	0.047584	yes
DIF_stipe_shell	YFB_stipe_skin	0.060497	no
DIF_stipe_shell	YFB_cap_skin	0.011041	yes
DIF_stipe_shell	YFB_cap_tissue	0.073760	no
DIF_stipe_shell	YFB_gill_tissue	0.110551	no
DIF_stipe_shell	YFB_veil	0.221256	no
DIF_stipe_shell	DIF_stipe_skin	0.252288	no
DIF_stipe_shell	DIF_cap_skin	0.024444	yes
DIF_stipe_shell	DIF_cap_tissue	0.157962	no
DIF_stipe_skin	DIF_gill_tissue	0.811782	no
DIF_stipe_skin	YFB_stipe_center	0.305155	no
DIF_stipe_skin	YFB_stipe_shell	0.617981	no
DIF_stipe_skin	YFB_stipe_skin	0.663765	no
DIF_stipe_skin	YFB_cap_skin	0.296400	no
DIF_stipe_skin	YFB_cap_tissue	0.708147	no
DIF_stipe_skin	YFB_gill_tissue	0.796047	no
DIF_stipe_skin	YFB_veil	0.950805	no
DIF_stipe_skin	DIF_cap_skin	0.466524	no
DIF_stipe_skin	DIF_cap_tissue	0.883637	no
DIF_cap_skin	DIF_gill_tissue	0.236900	no
DIF_cap_skin	YFB_stipe_center	0.872465	no
DIF_cap_skin	YFB_stipe_shell	0.910992	no
DIF_cap_skin	YFB_stipe_skin	0.876996	no
DIF_cap_skin	YFB_cap_skin	0.871704	no
DIF_cap_skin	YFB_cap_tissue	0.844896	no
DIF_cap_skin	YFB_gill_tissue	0.761145	no
DIF_cap_skin	YFB_veil	0.568143	no
DIF_cap_skin	DIF_cap_tissue	0.656659	no
DIF_cap_tissue	DIF_gill_tissue	0.650717	no
DIF_cap_tissue	YFB_stipe_center	0.475092	no
DIF_cap_tissue	YFB_stipe_shell	0.789255	no
DIF_cap_tissue	YFB_stipe_skin	0.835166	no
DIF_cap_tissue	YFB_cap_skin	0.466104	no
DIF_cap_tissue	YFB_cap_tissue	0.867800	no
DIF_cap_tissue	YFB_gill_tissue	0.933841	no
DIF_cap_tissue	YFB_veil	0.945296	no

Orthologs

Orthofinder run ID	1
Orthogroup	46
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|022110
Agaricus bisporus var bisporus H39	AgabiH39|248300
Agaricus bisporus var bisporus H97	AgabiH97|022110 (this protein)
Agaricus bisporus var bisporus H97	AgabiH97|043950
Rhodonia placenta FPRL280	RhoplFPRL280|332_8

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|022110 MAFEILLSLILASNAVYFAAAVPAAKHTCPDGKNKVSHEACCALFPVLEDIQTNHFENVCGEEVHEVLRIAFHDA IGWSPSGGGGGADGSIVTFSDIETKYPANEGIDDIADALKFFIDRHNLTAGDFIQFAATVGVTNCPGAPRMPFFL GRPAAIAPADDGLIPEPPDSVTKMLARFKDAGFNPKEVVALLASHSIAASDTIEPGLRGLPFDSTPGEFDSQFYI ETMLKGTVFPGVGGNPGEVKAPIPGEIRISSDERLARDDRTACDWQHFATDQKKMAREFSKAMVKISLLGQDKSK MVDCSDVIPQATPLRSKSYFPADLTVQDLEKTCKKPFPRLPSNPKVSSVAPVPTQ*
Coding	>AgabiH97|022110 ATGGCTTTTGAAATTCTCTTAAGCTTGATTTTGGCTTCGAATGCTGTTTACTTTGCTGCCGCTGTTCCTGCCGCA AAGCACACGTGTCCCGATGGCAAGAACAAGGTTTCCCATGAGGCTTGTTGCGCTTTGTTCCCCGTTCTCGAAGAT ATACAAACCAACCATTTTGAAAACGTATGCGGCGAAGAAGTCCATGAAGTCTTGCGCATAGCATTTCACGATGCT ATCGGATGGTCACCTTCGGGCGGCGGTGGAGGTGCTGATGGTTCCATTGTCACCTTTTCTGATATAGAGACCAAA TATCCCGCGAACGAGGGAATAGATGACATTGCCGACGCCTTGAAATTTTTCATAGATAGACACAACCTTACGGCT GGCGATTTCATTCAATTTGCTGCTACTGTTGGAGTGACAAATTGTCCGGGAGCACCTCGCATGCCATTCTTCTTG GGTCGCCCAGCCGCTATAGCTCCTGCTGATGATGGTCTCATCCCAGAGCCCCCCGATTCGGTCACTAAAATGCTT GCTCGCTTCAAAGATGCCGGTTTCAACCCCAAAGAAGTTGTAGCATTGCTTGCATCTCATTCTATCGCTGCTTCG GATACGATTGAGCCTGGTCTCCGAGGTCTTCCCTTTGACTCAACTCCCGGCGAATTTGATTCCCAGTTCTACATT GAGACTATGCTCAAAGGCACTGTGTTCCCAGGTGTTGGGGGGAACCCAGGCGAGGTTAAAGCTCCCATACCAGGC GAAATTCGTATCTCTTCAGATGAAAGATTAGCTCGAGACGACCGCACCGCTTGTGATTGGCAACATTTCGCTACC GATCAGAAGAAAATGGCTCGAGAGTTTAGCAAAGCCATGGTAAAAATATCACTACTCGGTCAAGATAAGAGCAAG ATGGTTGATTGCTCCGACGTCATTCCACAAGCGACGCCTTTGAGATCCAAGTCGTATTTCCCTGCAGATTTGACT GTTCAGGATCTCGAAAAGACTTGCAAGAAACCTTTCCCTAGGCTCCCTTCCAACCCCAAAGTCTCTTCCGTCGCA CCTGTTCCTACACAATGA
Transcript	>AgabiH97|022110 ATGGCTTTTGAAATTCTCTTAAGCTTGATTTTGGCTTCGAATGCTGTTTACTTTGCTGCCGCTGTTCCTGCCGCA AAGCACACGTGTCCCGATGGCAAGAACAAGGTTTCCCATGAGGCTTGTTGCGCTTTGTTCCCCGTTCTCGAAGAT ATACAAACCAACCATTTTGAAAACGTATGCGGCGAAGAAGTCCATGAAGTCTTGCGCATAGCATTTCACGATGCT ATCGGATGGTCACCTTCGGGCGGCGGTGGAGGTGCTGATGGTTCCATTGTCACCTTTTCTGATATAGAGACCAAA TATCCCGCGAACGAGGGAATAGATGACATTGCCGACGCCTTGAAATTTTTCATAGATAGACACAACCTTACGGCT GGCGATTTCATTCAATTTGCTGCTACTGTTGGAGTGACAAATTGTCCGGGAGCACCTCGCATGCCATTCTTCTTG GGTCGCCCAGCCGCTATAGCTCCTGCTGATGATGGTCTCATCCCAGAGCCCCCCGATTCGGTCACTAAAATGCTT GCTCGCTTCAAAGATGCCGGTTTCAACCCCAAAGAAGTTGTAGCATTGCTTGCATCTCATTCTATCGCTGCTTCG GATACGATTGAGCCTGGTCTCCGAGGTCTTCCCTTTGACTCAACTCCCGGCGAATTTGATTCCCAGTTCTACATT GAGACTATGCTCAAAGGCACTGTGTTCCCAGGTGTTGGGGGGAACCCAGGCGAGGTTAAAGCTCCCATACCAGGC GAAATTCGTATCTCTTCAGATGAAAGATTAGCTCGAGACGACCGCACCGCTTGTGATTGGCAACATTTCGCTACC GATCAGAAGAAAATGGCTCGAGAGTTTAGCAAAGCCATGGTAAAAATATCACTACTCGGTCAAGATAAGAGCAAG ATGGTTGATTGCTCCGACGTCATTCCACAAGCGACGCCTTTGAGATCCAAGTCGTATTTCCCTGCAGATTTGACT GTTCAGGATCTCGAAAAGACTTGCAAGAAACCTTTCCCTAGGCTCCCTTCCAACCCCAAAGTCTCTTCCGTCGCA CCTGTTCCTACACAATGA
Gene	>AgabiH97|022110 ATGGCTTTTGAAATTCTCTTAAGCTTGATTTTGGCTTCGAATGCTGTTTACTTTGCTGCCGGTGCGCATTAACCA TTATCTATGCGGTATGTGTTGACATACCCAATGAATAGCTGTTCCTGCCGCAAAGCACACGTGTCCCGATGGCAA GAACAAGGTTTCCCATGAGGCTTGTTGCGCTTTGTTCCCCGTTCTCGAAGATATACAAACCAACCATTTTGAAAA CGTATGCGGCGAAGAAGTAGGTTTCTTAGTTCTTGCTGTAAAGAAGCGATCTCATGATATGATACTTAAGGTCCA TGAAGTCTTGCGCATAGCATTTCACGATGCTATCGGATGGTCACCTTCGGGCGGGTACGTTTGGTCGTCGCCCGT GGTGGTTAGCGTCACTGATGTCTTCACTTCTAGCGGTGGAGGTGCTGATGGTTCCATTGTCACCTTTTCTGATAT AGAGACCAAATATCCCGCGAACGAGGGAATAGATGACATTGCCGACGCCTTGAAATTTTTCATAGATAGACACAA CCTTACGGCTGGCGATTTGTGCGTACACTTGGTTCGGATTTCGTGTTGCATCCTGTTAACATCTTCCTTAGCATT CAATTTGCTGCTACTGTTGGAGTGACAAATTGTCCGGGAGCACCTCGCATGCCATTCTTCTTGGGTCGCCCAGCC GCTATAGCTCCTGCTGATGATGGTCTCATCCCAGAGCCCCCCGGTTAGTCCATCGACAAAACTTGAGTAGATCTC GCATCTTAAAATATCGGATCAACAGATTCGGTCACTAAAATGCTTGCTCGCTTCAAAGATGCCGGTTTCAACCCC AAAGAAGTTGTAGCATTGCTTGCATCGTGAGTCCCGAGAGCAAACCGGGGGAGCATACCTTCTTATACCCCACAG TCATTCTATCGCTGCTTCGGATACGATTGAGCCTGGTGTAAGTTAAGCTTTCATTAGAATGCATTCATCTCATCA ATCTCACCCTCCAGCTCCGAGGGTAAGAACTCTTCTGACCCACAATAAACGATCAATATTCAACACGACCCTCTA GTCTTCCCTTTGACTCAACTCCCGGCGAATTTGATTCCCAGTTCTACATTGAGACTATGCTCAAAGGCACTGTGT TCCCAGGGTGAGCACTGTGCTCTCATGGCAGTTTATTGATCCTAATCTTGCTCAAGTGTTGGGGGGAACCCAGGC GAGGTTAAAGCTCCCATACCAGGCGAAATTCGTATCTCTTCAGATGAAAGAGTACGTGTAGGACTTCTTTGCCAT CCGTGTCTACGGCTATTAACGTGATCTTCCGATGCTTAGTTAGCTCGAGGTCAGAATCATTGTCGAAAGCCGTTT GGTAATATTGCCCTGCTGACGTCGTTCTAGACGACCGCACCGCTTGTGATTGGCAACATTTCGCTAGTAAGCATA ATCATCCATTTTGAAGAATCTGAAACCCACTTGAGTTATCACATTTAGCCGATCAGAAGAAAATGGCTCGAGAGT TTAGCAAAGCCATGGTAAAAATATCACTACTCGGTCAAGATAAGAGCAAGATGGTTGATTGCTCCGACGTCATTC CACAAGCGACGCCTTTGAGATCCAAGTCGTATTTCCCTGCAGATTTGACTGTTCAGGATCTCGAAAAGACTGTAA GTTCATTTGAAACGCTCTACAAAGTTTATTAATAAATTGAGCCTGCACGACTTTGATACAGTGCAAGAAACCTTT CCCTAGGCTCCCTTCCAACCCCAAAGTCTCTTCCGTCGCACCTGTGTAAGGTTTCTTGTCAGTTCCAAGCATCCG CTAACGCTAAACAATTGTCTAGTCCTACACAATGA