Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|021370
Gene name
Locationscaffold_10:1715583..1716892
Strand+
Gene length (bp)1309
Transcript length (bp)933
Coding sequence length (bp)933
Protein length (aa) 311

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03443 AA9 Auxiliary Activity family 9 (formerly GH61) 1.5E-52 19 229
PF00734 CBM_1 Fungal cellulose binding domain 1.1E-08 277 303

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q00023|CEL1_AGABI Cellulose-growth-specific protein OS=Agaricus bisporus GN=cel1 PE=3 SV=1 1 305 0.0E+00
sp|G2Q9T3|CEL61_MYCTT Polysaccharide monooxygenase Cel61a OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) GN=Cel61a PE=1 SV=1 1 305 5.0E-34
sp|O14405|GUN4_HYPJE Endoglucanase-4 OS=Hypocrea jecorina GN=cel61a PE=1 SV=1 2 305 1.0E-32
sp|Q7Z9M7|GUN7_HYPJQ Endoglucanase-7 OS=Hypocrea jecorina (strain QM6a) GN=cel61b PE=1 SV=3 8 243 2.0E-32
sp|B0Y9G4|EGLD_ASPFC Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=eglD PE=3 SV=1 56 305 3.0E-18
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q00023|CEL1_AGABI Cellulose-growth-specific protein OS=Agaricus bisporus GN=cel1 PE=3 SV=1 1 305 0.0E+00
sp|G2Q9T3|CEL61_MYCTT Polysaccharide monooxygenase Cel61a OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) GN=Cel61a PE=1 SV=1 1 305 5.0E-34
sp|O14405|GUN4_HYPJE Endoglucanase-4 OS=Hypocrea jecorina GN=cel61a PE=1 SV=1 2 305 1.0E-32
sp|Q7Z9M7|GUN7_HYPJQ Endoglucanase-7 OS=Hypocrea jecorina (strain QM6a) GN=cel61b PE=1 SV=3 8 243 2.0E-32
sp|B0Y9G4|EGLD_ASPFC Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=eglD PE=3 SV=1 56 305 3.0E-18
sp|Q4WBU0|EGLD_ASPFU Probable endo-beta-1,4-glucanase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=eglD PE=3 SV=1 56 305 4.0E-18
sp|Q5BCX8|EGLD_EMENI Endo-beta-1,4-glucanase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=eglD PE=1 SV=1 56 305 2.0E-16
sp|A1C4H2|EGLD_ASPCL Probable endo-beta-1,4-glucanase D OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=eglD PE=3 SV=1 56 305 2.0E-15
sp|Q0CEU4|EGLD_ASPTN Probable endo-beta-1,4-glucanase D OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=eglD PE=3 SV=1 56 305 2.0E-15
sp|A1DBS6|EGLD_NEOFI Probable endo-beta-1,4-glucanase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=eglD PE=3 SV=1 56 305 8.0E-15
sp|A2R5N0|EGLD_ASPNC Probable endo-beta-1,4-glucanase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=eglD PE=3 SV=1 56 243 5.0E-14
sp|Q96WQ9|EGLD_ASPKW Probable endo-beta-1,4-glucanase D OS=Aspergillus kawachii (strain NBRC 4308) GN=eglD PE=3 SV=1 56 243 2.0E-13
sp|Q2US83|EGLD_ASPOR Probable endo-beta-1,4-glucanase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=eglD PE=3 SV=1 56 243 2.0E-12
sp|B8MXJ7|EGLD_ASPFN Probable endo-beta-1,4-glucanase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=eglD PE=3 SV=1 56 243 2.0E-12
sp|P13860|GUX1_PHACH Exoglucanase 1 OS=Phanerochaete chrysosporium GN=CBH1 PE=2 SV=1 266 305 9.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0005576 extracellular region Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0030248 cellulose binding Yes
GO:0008152 metabolic process No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0030247 polysaccharide binding No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No
GO:0110165 cellular anatomical entity No
GO:0044238 primary metabolic process No
GO:0030246 carbohydrate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|021370
MLATFSLALGLFAAKVQAHGGVIGYSWDGTWYEGWHPYNTPVGQTSIERPWATFDPIMDATASTVGCNNDGNPGP
NQLTATVAAGTAITAYWNQVWPHPYGPMTTYLGKCPGSSCDGVNTNSLKWFKIDEAGLLSGTVGKGVWGSGKMID
QNNSWTTTIPSTVPSGAYMIRFETIALHSLPAQIYPECAQLTITGGGNRAPTSSELVSFPGGYSNSDPGLTVNLY
TQEAMTDTTYIVPGPPLYGSGGNGGSPTTTPHTTTPITTSPPPTSTPGTIPQYGQCGGIGWTGGTGCVAPYQCKV
INGKYIARNR*
Coding >AgabiH97|021370
ATGTTGGCTACTTTCTCACTAGCTTTGGGACTCTTCGCCGCAAAAGTCCAAGCTCACGGAGGCGTCATCGGATAT
TCCTGGGATGGTACTTGGTATGAGGGGTGGCACCCATACAACACTCCCGTAGGCCAGACCTCCATCGAGCGGCCT
TGGGCGACTTTTGATCCTATCATGGATGCAACCGCATCCACAGTCGGCTGCAATAACGATGGCAATCCTGGCCCG
AACCAATTGACCGCTACAGTTGCTGCTGGAACGGCTATCACTGCTTACTGGAACCAGGTTTGGCCACATCCCTAC
GGGCCAATGACTACCTACTTGGGTAAATGTCCTGGAAGCTCTTGCGACGGCGTTAACACGAACTCGCTCAAATGG
TTCAAGATTGACGAAGCCGGCCTCTTGTCCGGCACTGTTGGAAAAGGTGTATGGGGTTCTGGTAAAATGATTGAC
CAAAATAATAGTTGGACCACAACTATTCCTAGTACTGTCCCGAGTGGGGCTTACATGATTCGCTTCGAGACCATT
GCGCTGCACTCCCTTCCTGCTCAAATCTACCCCGAATGTGCTCAACTTACGATTACTGGTGGTGGAAACCGGGCA
CCTACATCCAGTGAATTAGTTTCCTTCCCCGGTGGATATTCTAACAGTGATCCTGGTCTGACCGTCAATCTCTAC
ACTCAAGAGGCTATGACCGATACCACATATATTGTTCCCGGACCTCCGCTCTATGGATCCGGTGGCAACGGTGGT
TCACCAACTACTACTCCCCATACTACTACTCCCATTACTACCAGTCCCCCTCCTACCAGCACTCCAGGAACTATT
CCTCAATACGGTCAATGTGGTGGTATTGGCTGGACTGGAGGCACCGGCTGTGTCGCCCCTTATCAATGTAAAGTC
ATCAATGGCAAGTATATAGCTCGGAACCGTTGA
Transcript >AgabiH97|021370
ATGTTGGCTACTTTCTCACTAGCTTTGGGACTCTTCGCCGCAAAAGTCCAAGCTCACGGAGGCGTCATCGGATAT
TCCTGGGATGGTACTTGGTATGAGGGGTGGCACCCATACAACACTCCCGTAGGCCAGACCTCCATCGAGCGGCCT
TGGGCGACTTTTGATCCTATCATGGATGCAACCGCATCCACAGTCGGCTGCAATAACGATGGCAATCCTGGCCCG
AACCAATTGACCGCTACAGTTGCTGCTGGAACGGCTATCACTGCTTACTGGAACCAGGTTTGGCCACATCCCTAC
GGGCCAATGACTACCTACTTGGGTAAATGTCCTGGAAGCTCTTGCGACGGCGTTAACACGAACTCGCTCAAATGG
TTCAAGATTGACGAAGCCGGCCTCTTGTCCGGCACTGTTGGAAAAGGTGTATGGGGTTCTGGTAAAATGATTGAC
CAAAATAATAGTTGGACCACAACTATTCCTAGTACTGTCCCGAGTGGGGCTTACATGATTCGCTTCGAGACCATT
GCGCTGCACTCCCTTCCTGCTCAAATCTACCCCGAATGTGCTCAACTTACGATTACTGGTGGTGGAAACCGGGCA
CCTACATCCAGTGAATTAGTTTCCTTCCCCGGTGGATATTCTAACAGTGATCCTGGTCTGACCGTCAATCTCTAC
ACTCAAGAGGCTATGACCGATACCACATATATTGTTCCCGGACCTCCGCTCTATGGATCCGGTGGCAACGGTGGT
TCACCAACTACTACTCCCCATACTACTACTCCCATTACTACCAGTCCCCCTCCTACCAGCACTCCAGGAACTATT
CCTCAATACGGTCAATGTGGTGGTATTGGCTGGACTGGAGGCACCGGCTGTGTCGCCCCTTATCAATGTAAAGTC
ATCAATGGCAAGTATATAGCTCGGAACCGTTGA
Gene >AgabiH97|021370
ATGTTGGCTACTTTCTCACTAGCTTTGGGACTCTTCGCCGCAAAAGTCCAAGCTCACGGAGGCGTCATCGGATAT
TCCTGGGATGGTACTTGGTATGAGGGGTGGCACCCATACAACACTCCCGTAGGCCAGACCTCCATCGAGCGGCCT
TGGGCGACTTTGTTAGTCGATTGCAACTTCTAACGGAAATTAATGCTTATTAGTCGCTTATGACAGTGATCCTAT
CATGGATGCAACCGCATCCACAGTCGGCTGCAATAACGATGGCAATCCTGGCCCGAACCAATTGACCGCTACAGT
TGCTGCTGGAACGGCTATCACTGCTTACTGGAACCAGGTTTGGCCACATCCCTACGGGCCAATGGTATGCACTGG
ACATTTCCCTTCATGCGAACGAGAGCTGATGGGAGCACAGACTACCTACTTGGGTAAATGTCCTGGAAGCTCTTG
CGACGGCGTTAACACGAACTCGCTCAAATGGGTAGGCTATATTCTAAATCATATAAAAAAGGTGTCCTGTCTAAT
AATTCTAACAGTTCAAGATTGACGAAGCCGGCCTCTTGTCCGGCACTGTTGGAAAAGGTGTATGGGGTTCTGGTA
AAATGATTGACCAAAATAATAGTTGGACCACAACTATTCCTAGTACTGTCCCGAGTGGGGCTTACATGATTCGCT
TCGAGACCATTGCGCTGCACTCCCTTCCTGCTGTAAGTCGATCCGTGATTCTTAAAAGCCGCCAAACTCTTACCA
AAGTTGCGATAGCAAATCTACCCCGAATGTGCTCAACTTACGATTACTGGTGGTGGAAACCGGGCACCTACATCC
AGTGAATTAGTTTCCTTCCCCGGTGGATATTCTAACAGTGATCCTGGTCGTAAGTTATGCAGCGCTTATGTTGAA
GCTGGTATTTTTCTAAGTCGCGCGTTCGTCAGTGACCGTCAATCTCTACACTCAAGAGGCTATGACCGAGTGAGT
TGAAATTGCAAGGAGCGGTGCCATTATTTTAATCTATTACATTTCAGTACCACATATATTGTTCCCGGACCTCCG
CTCTATGGATCCGGTGGCAACGGTGGTGTAAGTCAATAATGAACAATGTATTGAACTCACTCACATTTATTCATA
GTCACCAACTACTACTCCCCATACTACTACTCCCATTACTACCAGTCCCCCTCCTACCAGCACTCCAGGAACTAT
TCCTCAATACGGTCAATGTGGTGGTATTGGCTGGACTGGAGGCACCGGCTGTGTCGCCCCTTATCAATGTAAAGT
CATCAATGGCAAGTATATAGCTCGGAACCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail